Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0502

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0501 and B158DRAFT_0502 are separated by 182 nucleotidesB158DRAFT_0502 and B158DRAFT_0503 are separated by 80 nucleotidesB158DRAFT_0503 and B158DRAFT_0504 are separated by 130 nucleotides B158DRAFT_0501: B158DRAFT_0501 - hypothetical protein, at 505,261 to 506,118 _0501 B158DRAFT_0502: B158DRAFT_0502 - hypothetical protein, at 506,301 to 506,882 _0502 B158DRAFT_0503: B158DRAFT_0503 - ribosome biogenesis GTP-binding protein YsxC/EngB, at 506,963 to 507,580 _0503 B158DRAFT_0504: B158DRAFT_0504 - Cytochrome c553, at 507,711 to 508,328 _0504 Position (kb) 506 507Strain fitness (log2 ratio) -2 -1 0 1at 505.338 kb on + strandat 505.346 kb on - strandat 505.490 kb on + strand, within B158DRAFT_0501at 505.498 kb on - strand, within B158DRAFT_0501at 505.612 kb on - strand, within B158DRAFT_0501at 505.615 kb on + strand, within B158DRAFT_0501at 505.640 kb on + strand, within B158DRAFT_0501at 505.815 kb on + strand, within B158DRAFT_0501at 505.818 kb on - strand, within B158DRAFT_0501at 505.840 kb on + strand, within B158DRAFT_0501at 506.023 kb on + strand, within B158DRAFT_0501at 506.031 kb on - strand, within B158DRAFT_0501at 506.077 kb on + strandat 506.210 kb on - strandat 506.332 kb on + strandat 506.388 kb on + strand, within B158DRAFT_0502at 506.388 kb on + strand, within B158DRAFT_0502at 506.393 kb on + strand, within B158DRAFT_0502at 506.393 kb on + strand, within B158DRAFT_0502at 506.401 kb on - strand, within B158DRAFT_0502at 506.423 kb on + strand, within B158DRAFT_0502at 506.436 kb on - strand, within B158DRAFT_0502at 506.441 kb on - strand, within B158DRAFT_0502at 506.474 kb on + strand, within B158DRAFT_0502at 506.483 kb on + strand, within B158DRAFT_0502at 506.496 kb on + strand, within B158DRAFT_0502at 506.498 kb on + strand, within B158DRAFT_0502at 506.498 kb on + strand, within B158DRAFT_0502at 506.506 kb on - strand, within B158DRAFT_0502at 506.506 kb on - strand, within B158DRAFT_0502at 506.506 kb on - strand, within B158DRAFT_0502at 506.506 kb on - strand, within B158DRAFT_0502at 506.506 kb on - strand, within B158DRAFT_0502at 506.562 kb on + strand, within B158DRAFT_0502at 506.580 kb on + strand, within B158DRAFT_0502at 506.580 kb on + strand, within B158DRAFT_0502at 506.580 kb on + strand, within B158DRAFT_0502at 506.580 kb on + strand, within B158DRAFT_0502at 506.580 kb on + strand, within B158DRAFT_0502at 506.580 kb on + strand, within B158DRAFT_0502at 506.588 kb on - strand, within B158DRAFT_0502at 506.588 kb on - strand, within B158DRAFT_0502at 506.588 kb on - strand, within B158DRAFT_0502at 506.588 kb on - strand, within B158DRAFT_0502at 506.588 kb on - strand, within B158DRAFT_0502at 506.651 kb on - strand, within B158DRAFT_0502at 506.720 kb on + strand, within B158DRAFT_0502at 506.720 kb on + strand, within B158DRAFT_0502at 506.720 kb on + strand, within B158DRAFT_0502at 506.720 kb on + strand, within B158DRAFT_0502at 506.728 kb on - strand, within B158DRAFT_0502at 506.728 kb on - strand, within B158DRAFT_0502at 506.728 kb on - strand, within B158DRAFT_0502at 506.728 kb on - strand, within B158DRAFT_0502at 506.777 kb on + strand, within B158DRAFT_0502at 506.777 kb on + strand, within B158DRAFT_0502at 506.777 kb on + strand, within B158DRAFT_0502at 506.784 kb on - strand, within B158DRAFT_0502at 506.784 kb on - strand, within B158DRAFT_0502at 506.784 kb on - strand, within B158DRAFT_0502at 506.785 kb on - strand, within B158DRAFT_0502at 506.785 kb on - strand, within B158DRAFT_0502at 506.785 kb on - strand, within B158DRAFT_0502at 506.804 kb on + strand, within B158DRAFT_0502at 506.810 kb on + strand, within B158DRAFT_0502at 506.818 kb on - strand, within B158DRAFT_0502at 506.818 kb on - strand, within B158DRAFT_0502at 506.834 kb on - strandat 506.870 kb on - strandat 506.870 kb on - strandat 506.884 kb on - strandat 506.986 kb on + strandat 506.994 kb on - strandat 507.002 kb on - strandat 507.002 kb on - strandat 507.003 kb on - strandat 507.015 kb on + strandat 507.015 kb on + strandat 507.023 kb on - strandat 507.023 kb on - strandat 507.700 kb on - strandat 507.779 kb on + strand, within B158DRAFT_0504at 507.787 kb on + strand, within B158DRAFT_0504at 507.795 kb on - strand, within B158DRAFT_0504at 507.836 kb on - strand, within B158DRAFT_0504

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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505,338 + -0.6
505,346 - +1.0
505,490 + B158DRAFT_0501 0.27 +0.7
505,498 - B158DRAFT_0501 0.28 +1.2
505,612 - B158DRAFT_0501 0.41 +0.8
505,615 + B158DRAFT_0501 0.41 +1.2
505,640 + B158DRAFT_0501 0.44 +1.2
505,815 + B158DRAFT_0501 0.65 +1.2
505,818 - B158DRAFT_0501 0.65 +1.7
505,840 + B158DRAFT_0501 0.67 +1.0
506,023 + B158DRAFT_0501 0.89 +0.1
506,031 - B158DRAFT_0501 0.90 +0.7
506,077 + +0.5
506,210 - +0.4
506,332 + -0.4
506,388 + B158DRAFT_0502 0.15 -0.2
506,388 + B158DRAFT_0502 0.15 +0.0
506,393 + B158DRAFT_0502 0.16 -0.5
506,393 + B158DRAFT_0502 0.16 +0.4
506,401 - B158DRAFT_0502 0.17 +0.4
506,423 + B158DRAFT_0502 0.21 -0.3
506,436 - B158DRAFT_0502 0.23 +0.1
506,441 - B158DRAFT_0502 0.24 -0.9
506,474 + B158DRAFT_0502 0.30 -0.0
506,483 + B158DRAFT_0502 0.31 -0.1
506,496 + B158DRAFT_0502 0.34 +0.2
506,498 + B158DRAFT_0502 0.34 -0.0
506,498 + B158DRAFT_0502 0.34 -0.4
506,506 - B158DRAFT_0502 0.35 +0.2
506,506 - B158DRAFT_0502 0.35 -0.0
506,506 - B158DRAFT_0502 0.35 +0.2
506,506 - B158DRAFT_0502 0.35 +0.0
506,506 - B158DRAFT_0502 0.35 +0.1
506,562 + B158DRAFT_0502 0.45 -0.3
506,580 + B158DRAFT_0502 0.48 -0.6
506,580 + B158DRAFT_0502 0.48 +0.2
506,580 + B158DRAFT_0502 0.48 -0.2
506,580 + B158DRAFT_0502 0.48 -0.6
506,580 + B158DRAFT_0502 0.48 +0.1
506,580 + B158DRAFT_0502 0.48 -0.8
506,588 - B158DRAFT_0502 0.49 -0.1
506,588 - B158DRAFT_0502 0.49 +0.4
506,588 - B158DRAFT_0502 0.49 +0.9
506,588 - B158DRAFT_0502 0.49 +0.3
506,588 - B158DRAFT_0502 0.49 -0.7
506,651 - B158DRAFT_0502 0.60 -0.3
506,720 + B158DRAFT_0502 0.72 -0.5
506,720 + B158DRAFT_0502 0.72 -0.3
506,720 + B158DRAFT_0502 0.72 -0.2
506,720 + B158DRAFT_0502 0.72 -0.5
506,728 - B158DRAFT_0502 0.73 +0.4
506,728 - B158DRAFT_0502 0.73 -0.8
506,728 - B158DRAFT_0502 0.73 +0.1
506,728 - B158DRAFT_0502 0.73 -0.7
506,777 + B158DRAFT_0502 0.82 -0.1
506,777 + B158DRAFT_0502 0.82 -0.3
506,777 + B158DRAFT_0502 0.82 -0.6
506,784 - B158DRAFT_0502 0.83 +0.0
506,784 - B158DRAFT_0502 0.83 +0.2
506,784 - B158DRAFT_0502 0.83 +0.0
506,785 - B158DRAFT_0502 0.83 +0.2
506,785 - B158DRAFT_0502 0.83 +0.4
506,785 - B158DRAFT_0502 0.83 -0.3
506,804 + B158DRAFT_0502 0.86 -0.9
506,810 + B158DRAFT_0502 0.87 -0.2
506,818 - B158DRAFT_0502 0.89 +0.2
506,818 - B158DRAFT_0502 0.89 +0.1
506,834 - +0.2
506,870 - +0.4
506,870 - +0.1
506,884 - +0.1
506,986 + -0.0
506,994 - +0.5
507,002 - -0.0
507,002 - +0.4
507,003 - +0.0
507,015 + -1.6
507,015 + -2.2
507,023 - -0.6
507,023 - +0.4
507,700 - -2.5
507,779 + B158DRAFT_0504 0.11 -1.6
507,787 + B158DRAFT_0504 0.12 -1.2
507,795 - B158DRAFT_0504 0.14 -1.5
507,836 - B158DRAFT_0504 0.20 -1.1

Or see this region's nucleotide sequence