Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0375

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0374 and B158DRAFT_0375 are separated by 240 nucleotidesB158DRAFT_0375 and B158DRAFT_0376 are separated by 38 nucleotides B158DRAFT_0374: B158DRAFT_0374 - Glycosyltransferases, probably involved in cell wall biogenesis, at 378,416 to 379,780 _0374 B158DRAFT_0375: B158DRAFT_0375 - hypothetical protein, at 380,021 to 381,292 _0375 B158DRAFT_0376: B158DRAFT_0376 - CAAX amino terminal protease family., at 381,331 to 382,020 _0376 Position (kb) 380 381 382Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 379.023 kb on + strand, within B158DRAFT_0374at 379.036 kb on - strand, within B158DRAFT_0374at 379.050 kb on + strand, within B158DRAFT_0374at 379.065 kb on + strand, within B158DRAFT_0374at 379.065 kb on + strand, within B158DRAFT_0374at 379.065 kb on + strand, within B158DRAFT_0374at 379.065 kb on + strand, within B158DRAFT_0374at 379.120 kb on + strand, within B158DRAFT_0374at 379.120 kb on + strand, within B158DRAFT_0374at 379.128 kb on - strand, within B158DRAFT_0374at 379.130 kb on + strand, within B158DRAFT_0374at 379.280 kb on + strand, within B158DRAFT_0374at 379.287 kb on - strand, within B158DRAFT_0374at 379.307 kb on - strand, within B158DRAFT_0374at 379.326 kb on + strand, within B158DRAFT_0374at 379.435 kb on + strand, within B158DRAFT_0374at 379.435 kb on + strand, within B158DRAFT_0374at 379.443 kb on - strand, within B158DRAFT_0374at 379.455 kb on + strand, within B158DRAFT_0374at 379.455 kb on + strand, within B158DRAFT_0374at 379.455 kb on + strand, within B158DRAFT_0374at 379.457 kb on + strand, within B158DRAFT_0374at 379.462 kb on + strand, within B158DRAFT_0374at 379.465 kb on - strand, within B158DRAFT_0374at 379.493 kb on - strand, within B158DRAFT_0374at 379.517 kb on - strand, within B158DRAFT_0374at 379.517 kb on - strand, within B158DRAFT_0374at 379.517 kb on - strand, within B158DRAFT_0374at 379.526 kb on - strand, within B158DRAFT_0374at 379.533 kb on - strand, within B158DRAFT_0374at 379.545 kb on + strand, within B158DRAFT_0374at 379.572 kb on - strand, within B158DRAFT_0374at 379.676 kb on - strandat 379.720 kb on + strandat 379.720 kb on + strandat 379.720 kb on + strandat 379.720 kb on + strandat 379.720 kb on + strandat 379.728 kb on - strandat 379.728 kb on - strandat 379.741 kb on + strandat 379.846 kb on + strandat 379.854 kb on - strandat 379.856 kb on + strandat 379.856 kb on + strandat 379.864 kb on - strandat 379.899 kb on - strandat 379.919 kb on - strandat 380.017 kb on - strandat 380.047 kb on + strandat 380.055 kb on - strandat 380.100 kb on + strandat 380.105 kb on + strandat 380.127 kb on + strandat 380.134 kb on + strandat 380.238 kb on + strand, within B158DRAFT_0375at 380.238 kb on + strand, within B158DRAFT_0375at 380.238 kb on + strand, within B158DRAFT_0375at 380.238 kb on + strand, within B158DRAFT_0375at 380.238 kb on + strand, within B158DRAFT_0375at 380.238 kb on + strand, within B158DRAFT_0375at 380.238 kb on + strand, within B158DRAFT_0375at 380.245 kb on - strand, within B158DRAFT_0375at 380.246 kb on - strand, within B158DRAFT_0375at 380.246 kb on - strand, within B158DRAFT_0375at 380.246 kb on - strand, within B158DRAFT_0375at 380.246 kb on - strand, within B158DRAFT_0375at 380.246 kb on - strand, within B158DRAFT_0375at 380.246 kb on - strand, within B158DRAFT_0375at 380.246 kb on - strand, within B158DRAFT_0375at 380.282 kb on - strand, within B158DRAFT_0375at 380.310 kb on + strand, within B158DRAFT_0375at 380.457 kb on - strand, within B158DRAFT_0375at 380.603 kb on - strand, within B158DRAFT_0375at 380.693 kb on - strand, within B158DRAFT_0375at 380.930 kb on - strand, within B158DRAFT_0375at 380.932 kb on + strand, within B158DRAFT_0375at 380.940 kb on - strand, within B158DRAFT_0375at 380.989 kb on - strand, within B158DRAFT_0375at 381.043 kb on + strand, within B158DRAFT_0375at 381.084 kb on + strand, within B158DRAFT_0375at 381.247 kb on - strandat 381.333 kb on + strandat 381.387 kb on + strandat 381.432 kb on + strand, within B158DRAFT_0376at 381.450 kb on + strand, within B158DRAFT_0376at 381.458 kb on - strand, within B158DRAFT_0376at 381.488 kb on - strand, within B158DRAFT_0376at 381.495 kb on + strand, within B158DRAFT_0376at 381.498 kb on + strand, within B158DRAFT_0376at 381.584 kb on - strand, within B158DRAFT_0376at 381.662 kb on - strand, within B158DRAFT_0376at 381.738 kb on + strand, within B158DRAFT_0376at 381.767 kb on + strand, within B158DRAFT_0376at 381.767 kb on + strand, within B158DRAFT_0376at 381.775 kb on - strand, within B158DRAFT_0376at 381.775 kb on - strand, within B158DRAFT_0376at 381.843 kb on + strand, within B158DRAFT_0376at 381.843 kb on + strand, within B158DRAFT_0376at 381.843 kb on - strand, within B158DRAFT_0376at 381.852 kb on + strand, within B158DRAFT_0376at 381.882 kb on + strand, within B158DRAFT_0376at 381.882 kb on + strand, within B158DRAFT_0376at 381.890 kb on - strand, within B158DRAFT_0376at 381.890 kb on - strand, within B158DRAFT_0376at 381.927 kb on + strand, within B158DRAFT_0376at 381.955 kb on - strandat 381.962 kb on - strandat 381.968 kb on - strandat 381.970 kb on + strandat 381.978 kb on - strandat 381.983 kb on - strandat 381.983 kb on - strandat 382.103 kb on - strandat 382.169 kb on + strandat 382.169 kb on + strandat 382.169 kb on + strandat 382.177 kb on - strandat 382.177 kb on - strandat 382.177 kb on - strandat 382.177 kb on - strandat 382.177 kb on - strandat 382.202 kb on + strandat 382.215 kb on + strandat 382.215 kb on + strandat 382.223 kb on - strandat 382.223 kb on - strandat 382.223 kb on - strandat 382.227 kb on + strandat 382.228 kb on + strandat 382.228 kb on + strandat 382.236 kb on - strandat 382.236 kb on - strandat 382.236 kb on - strandat 382.240 kb on + strandat 382.243 kb on - strandat 382.248 kb on - strandat 382.248 kb on - strandat 382.248 kb on - strandat 382.248 kb on - strandat 382.248 kb on - strandat 382.248 kb on - strandat 382.248 kb on - strandat 382.248 kb on - strandat 382.248 kb on - strandat 382.264 kb on + strandat 382.269 kb on + strandat 382.269 kb on + strandat 382.277 kb on - strandat 382.277 kb on - strandat 382.277 kb on - strandat 382.277 kb on - strandat 382.277 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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379,023 + B158DRAFT_0374 0.44 +0.3
379,036 - B158DRAFT_0374 0.45 +0.7
379,050 + B158DRAFT_0374 0.46 +0.7
379,065 + B158DRAFT_0374 0.48 -0.1
379,065 + B158DRAFT_0374 0.48 +0.5
379,065 + B158DRAFT_0374 0.48 +0.8
379,065 + B158DRAFT_0374 0.48 +0.3
379,120 + B158DRAFT_0374 0.52 +0.4
379,120 + B158DRAFT_0374 0.52 +0.1
379,128 - B158DRAFT_0374 0.52 -0.3
379,130 + B158DRAFT_0374 0.52 +0.1
379,280 + B158DRAFT_0374 0.63 -0.8
379,287 - B158DRAFT_0374 0.64 -0.1
379,307 - B158DRAFT_0374 0.65 +0.1
379,326 + B158DRAFT_0374 0.67 +0.3
379,435 + B158DRAFT_0374 0.75 -0.2
379,435 + B158DRAFT_0374 0.75 -0.6
379,443 - B158DRAFT_0374 0.75 +0.8
379,455 + B158DRAFT_0374 0.76 -0.0
379,455 + B158DRAFT_0374 0.76 +0.6
379,455 + B158DRAFT_0374 0.76 +0.5
379,457 + B158DRAFT_0374 0.76 +0.1
379,462 + B158DRAFT_0374 0.77 +0.1
379,465 - B158DRAFT_0374 0.77 +0.7
379,493 - B158DRAFT_0374 0.79 +0.2
379,517 - B158DRAFT_0374 0.81 +0.5
379,517 - B158DRAFT_0374 0.81 +0.1
379,517 - B158DRAFT_0374 0.81 -0.6
379,526 - B158DRAFT_0374 0.81 +0.2
379,533 - B158DRAFT_0374 0.82 -0.3
379,545 + B158DRAFT_0374 0.83 +0.3
379,572 - B158DRAFT_0374 0.85 +0.5
379,676 - +0.2
379,720 + -0.2
379,720 + +0.4
379,720 + -0.2
379,720 + -0.2
379,720 + +0.3
379,728 - +0.3
379,728 - -0.7
379,741 + +0.1
379,846 + -0.1
379,854 - +0.2
379,856 + -0.0
379,856 + -0.3
379,864 - -1.0
379,899 - -0.2
379,919 - -0.3
380,017 - +0.4
380,047 + +0.3
380,055 - +0.2
380,100 + +0.6
380,105 + +1.0
380,127 + +0.6
380,134 + +0.8
380,238 + B158DRAFT_0375 0.17 +0.2
380,238 + B158DRAFT_0375 0.17 +0.2
380,238 + B158DRAFT_0375 0.17 +1.1
380,238 + B158DRAFT_0375 0.17 +0.6
380,238 + B158DRAFT_0375 0.17 +0.7
380,238 + B158DRAFT_0375 0.17 -0.1
380,238 + B158DRAFT_0375 0.17 +0.5
380,245 - B158DRAFT_0375 0.18 +0.8
380,246 - B158DRAFT_0375 0.18 +0.7
380,246 - B158DRAFT_0375 0.18 +0.7
380,246 - B158DRAFT_0375 0.18 +0.4
380,246 - B158DRAFT_0375 0.18 +1.1
380,246 - B158DRAFT_0375 0.18 -0.1
380,246 - B158DRAFT_0375 0.18 +1.8
380,246 - B158DRAFT_0375 0.18 +0.4
380,282 - B158DRAFT_0375 0.21 +0.7
380,310 + B158DRAFT_0375 0.23 +0.9
380,457 - B158DRAFT_0375 0.34 +0.9
380,603 - B158DRAFT_0375 0.46 +0.3
380,693 - B158DRAFT_0375 0.53 +0.4
380,930 - B158DRAFT_0375 0.71 -0.8
380,932 + B158DRAFT_0375 0.72 -1.1
380,940 - B158DRAFT_0375 0.72 -0.7
380,989 - B158DRAFT_0375 0.76 -1.5
381,043 + B158DRAFT_0375 0.80 -1.1
381,084 + B158DRAFT_0375 0.84 -1.0
381,247 - -0.7
381,333 + -0.1
381,387 + +0.8
381,432 + B158DRAFT_0376 0.15 +0.2
381,450 + B158DRAFT_0376 0.17 +0.4
381,458 - B158DRAFT_0376 0.18 -1.1
381,488 - B158DRAFT_0376 0.23 +0.2
381,495 + B158DRAFT_0376 0.24 +1.1
381,498 + B158DRAFT_0376 0.24 +0.0
381,584 - B158DRAFT_0376 0.37 +1.6
381,662 - B158DRAFT_0376 0.48 +0.2
381,738 + B158DRAFT_0376 0.59 -0.1
381,767 + B158DRAFT_0376 0.63 +0.4
381,767 + B158DRAFT_0376 0.63 +1.3
381,775 - B158DRAFT_0376 0.64 +0.3
381,775 - B158DRAFT_0376 0.64 -0.7
381,843 + B158DRAFT_0376 0.74 +0.4
381,843 + B158DRAFT_0376 0.74 -0.2
381,843 - B158DRAFT_0376 0.74 +0.4
381,852 + B158DRAFT_0376 0.76 -0.2
381,882 + B158DRAFT_0376 0.80 -0.1
381,882 + B158DRAFT_0376 0.80 +0.7
381,890 - B158DRAFT_0376 0.81 +0.1
381,890 - B158DRAFT_0376 0.81 -0.2
381,927 + B158DRAFT_0376 0.86 +0.3
381,955 - +0.3
381,962 - +0.1
381,968 - +0.3
381,970 + +0.1
381,978 - +0.0
381,983 - +0.7
381,983 - +0.1
382,103 - -0.3
382,169 + +0.2
382,169 + +0.5
382,169 + -0.2
382,177 - -0.4
382,177 - -0.7
382,177 - +0.2
382,177 - -0.2
382,177 - -0.0
382,202 + -0.0
382,215 + -0.1
382,215 + -1.0
382,223 - -0.7
382,223 - -0.9
382,223 - -1.0
382,227 + -0.6
382,228 + -1.1
382,228 + -0.2
382,236 - -1.7
382,236 - -0.5
382,236 - -1.1
382,240 + +0.2
382,243 - +0.4
382,248 - +0.1
382,248 - +0.3
382,248 - +1.8
382,248 - +0.2
382,248 - -0.0
382,248 - +0.7
382,248 - -0.7
382,248 - -0.9
382,248 - +0.2
382,264 + -1.2
382,269 + -1.1
382,269 + -0.5
382,277 - -2.8
382,277 - -2.2
382,277 - -0.9
382,277 - -1.4
382,277 - -1.7

Or see this region's nucleotide sequence