Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0356

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0355 and B158DRAFT_0356 are separated by 14 nucleotidesB158DRAFT_0356 and B158DRAFT_0357 are separated by 264 nucleotides B158DRAFT_0355: B158DRAFT_0355 - fatty oxidation complex, beta subunit FadA, at 356,284 to 357,453 _0355 B158DRAFT_0356: B158DRAFT_0356 - fatty oxidation complex, alpha subunit FadB, at 357,468 to 359,624 _0356 B158DRAFT_0357: B158DRAFT_0357 - Xaa-Pro aminopeptidase, at 359,889 to 361,208 _0357 Position (kb) 357 358 359 360Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 356.491 kb on + strand, within B158DRAFT_0355at 356.599 kb on - strand, within B158DRAFT_0355at 356.672 kb on - strand, within B158DRAFT_0355at 356.704 kb on - strand, within B158DRAFT_0355at 356.923 kb on - strand, within B158DRAFT_0355at 356.939 kb on - strand, within B158DRAFT_0355at 356.956 kb on - strand, within B158DRAFT_0355at 356.980 kb on - strand, within B158DRAFT_0355at 357.034 kb on + strand, within B158DRAFT_0355at 357.042 kb on - strand, within B158DRAFT_0355at 357.094 kb on - strand, within B158DRAFT_0355at 357.149 kb on + strand, within B158DRAFT_0355at 357.173 kb on - strand, within B158DRAFT_0355at 357.201 kb on - strand, within B158DRAFT_0355at 357.261 kb on + strand, within B158DRAFT_0355at 357.261 kb on + strand, within B158DRAFT_0355at 357.261 kb on + strand, within B158DRAFT_0355at 357.261 kb on + strand, within B158DRAFT_0355at 357.269 kb on - strand, within B158DRAFT_0355at 357.349 kb on - strandat 357.439 kb on - strandat 357.510 kb on + strandat 357.518 kb on - strandat 357.600 kb on + strandat 357.600 kb on + strandat 357.608 kb on - strandat 357.626 kb on - strandat 357.626 kb on - strandat 357.657 kb on + strandat 357.665 kb on - strandat 357.694 kb on - strand, within B158DRAFT_0356at 357.719 kb on + strand, within B158DRAFT_0356at 357.848 kb on + strand, within B158DRAFT_0356at 357.882 kb on - strand, within B158DRAFT_0356at 357.942 kb on + strand, within B158DRAFT_0356at 357.949 kb on + strand, within B158DRAFT_0356at 357.950 kb on - strand, within B158DRAFT_0356at 357.950 kb on - strand, within B158DRAFT_0356at 357.950 kb on - strand, within B158DRAFT_0356at 357.957 kb on - strand, within B158DRAFT_0356at 358.184 kb on - strand, within B158DRAFT_0356at 358.256 kb on - strand, within B158DRAFT_0356at 358.266 kb on - strand, within B158DRAFT_0356at 358.268 kb on + strand, within B158DRAFT_0356at 358.524 kb on + strand, within B158DRAFT_0356at 358.568 kb on + strand, within B158DRAFT_0356at 358.568 kb on + strand, within B158DRAFT_0356at 358.574 kb on - strand, within B158DRAFT_0356at 358.659 kb on + strand, within B158DRAFT_0356at 358.660 kb on - strand, within B158DRAFT_0356at 358.861 kb on + strand, within B158DRAFT_0356at 358.869 kb on - strand, within B158DRAFT_0356at 358.869 kb on - strand, within B158DRAFT_0356at 358.884 kb on - strand, within B158DRAFT_0356at 358.885 kb on + strand, within B158DRAFT_0356at 358.885 kb on + strand, within B158DRAFT_0356at 358.890 kb on + strand, within B158DRAFT_0356at 358.903 kb on - strand, within B158DRAFT_0356at 358.910 kb on + strand, within B158DRAFT_0356at 358.918 kb on - strand, within B158DRAFT_0356at 358.944 kb on - strand, within B158DRAFT_0356at 359.510 kb on + strandat 359.746 kb on + strandat 359.746 kb on + strandat 359.754 kb on - strandat 359.824 kb on - strandat 360.001 kb on + strandat 360.001 kb on + strandat 360.009 kb on - strandat 360.009 kb on - strandat 360.213 kb on + strand, within B158DRAFT_0357at 360.213 kb on + strand, within B158DRAFT_0357at 360.213 kb on + strand, within B158DRAFT_0357at 360.221 kb on - strand, within B158DRAFT_0357at 360.221 kb on - strand, within B158DRAFT_0357at 360.274 kb on + strand, within B158DRAFT_0357at 360.274 kb on + strand, within B158DRAFT_0357at 360.282 kb on - strand, within B158DRAFT_0357at 360.320 kb on + strand, within B158DRAFT_0357at 360.328 kb on - strand, within B158DRAFT_0357at 360.425 kb on - strand, within B158DRAFT_0357at 360.425 kb on - strand, within B158DRAFT_0357at 360.508 kb on + strand, within B158DRAFT_0357at 360.522 kb on + strand, within B158DRAFT_0357at 360.524 kb on - strand, within B158DRAFT_0357at 360.610 kb on - strand, within B158DRAFT_0357

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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356,491 + B158DRAFT_0355 0.18 -0.7
356,599 - B158DRAFT_0355 0.27 -0.3
356,672 - B158DRAFT_0355 0.33 -0.2
356,704 - B158DRAFT_0355 0.36 -0.2
356,923 - B158DRAFT_0355 0.55 +0.0
356,939 - B158DRAFT_0355 0.56 -0.3
356,956 - B158DRAFT_0355 0.57 +0.1
356,980 - B158DRAFT_0355 0.59 -0.2
357,034 + B158DRAFT_0355 0.64 -0.3
357,042 - B158DRAFT_0355 0.65 +0.2
357,094 - B158DRAFT_0355 0.69 -0.5
357,149 + B158DRAFT_0355 0.74 -0.2
357,173 - B158DRAFT_0355 0.76 -0.3
357,201 - B158DRAFT_0355 0.78 -0.0
357,261 + B158DRAFT_0355 0.84 -0.2
357,261 + B158DRAFT_0355 0.84 -0.8
357,261 + B158DRAFT_0355 0.84 -0.6
357,261 + B158DRAFT_0355 0.84 +0.3
357,269 - B158DRAFT_0355 0.84 -0.5
357,349 - +0.3
357,439 - +0.5
357,510 + +0.2
357,518 - +0.4
357,600 + -0.8
357,600 + -0.5
357,608 - -0.4
357,626 - -1.5
357,626 - -1.4
357,657 + -1.0
357,665 - -3.0
357,694 - B158DRAFT_0356 0.10 -0.5
357,719 + B158DRAFT_0356 0.12 -1.4
357,848 + B158DRAFT_0356 0.18 -0.4
357,882 - B158DRAFT_0356 0.19 -1.0
357,942 + B158DRAFT_0356 0.22 +0.3
357,949 + B158DRAFT_0356 0.22 -1.4
357,950 - B158DRAFT_0356 0.22 -0.4
357,950 - B158DRAFT_0356 0.22 -0.7
357,950 - B158DRAFT_0356 0.22 -0.4
357,957 - B158DRAFT_0356 0.23 -1.0
358,184 - B158DRAFT_0356 0.33 +0.1
358,256 - B158DRAFT_0356 0.37 -0.4
358,266 - B158DRAFT_0356 0.37 -2.6
358,268 + B158DRAFT_0356 0.37 -0.5
358,524 + B158DRAFT_0356 0.49 -1.4
358,568 + B158DRAFT_0356 0.51 -1.3
358,568 + B158DRAFT_0356 0.51 +0.4
358,574 - B158DRAFT_0356 0.51 -1.4
358,659 + B158DRAFT_0356 0.55 -1.4
358,660 - B158DRAFT_0356 0.55 +0.2
358,861 + B158DRAFT_0356 0.65 -1.9
358,869 - B158DRAFT_0356 0.65 -0.1
358,869 - B158DRAFT_0356 0.65 -2.6
358,884 - B158DRAFT_0356 0.66 -0.4
358,885 + B158DRAFT_0356 0.66 -4.1
358,885 + B158DRAFT_0356 0.66 -0.1
358,890 + B158DRAFT_0356 0.66 -2.7
358,903 - B158DRAFT_0356 0.67 -2.5
358,910 + B158DRAFT_0356 0.67 -2.7
358,918 - B158DRAFT_0356 0.67 -1.1
358,944 - B158DRAFT_0356 0.68 -1.3
359,510 + -1.1
359,746 + -0.3
359,746 + +0.7
359,754 - +0.1
359,824 - -0.2
360,001 + -0.7
360,001 + -0.9
360,009 - -0.6
360,009 - -0.5
360,213 + B158DRAFT_0357 0.25 -0.6
360,213 + B158DRAFT_0357 0.25 -0.3
360,213 + B158DRAFT_0357 0.25 +0.3
360,221 - B158DRAFT_0357 0.25 +0.1
360,221 - B158DRAFT_0357 0.25 -0.4
360,274 + B158DRAFT_0357 0.29 +0.3
360,274 + B158DRAFT_0357 0.29 -0.6
360,282 - B158DRAFT_0357 0.30 -0.7
360,320 + B158DRAFT_0357 0.33 -0.6
360,328 - B158DRAFT_0357 0.33 -0.8
360,425 - B158DRAFT_0357 0.41 -1.2
360,425 - B158DRAFT_0357 0.41 -0.7
360,508 + B158DRAFT_0357 0.47 -1.1
360,522 + B158DRAFT_0357 0.48 -1.7
360,524 - B158DRAFT_0357 0.48 -0.1
360,610 - B158DRAFT_0357 0.55 -0.9

Or see this region's nucleotide sequence