Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0291

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0290 and B158DRAFT_0291 overlap by 4 nucleotidesB158DRAFT_0291 and B158DRAFT_0293 are separated by 618 nucleotidesB158DRAFT_0293 and B158DRAFT_0294 overlap by 17 nucleotides B158DRAFT_0290: B158DRAFT_0290 - thiamine-phosphate diphosphorylase, at 293,422 to 294,903 _0290 B158DRAFT_0291: B158DRAFT_0291 - thiazole-phosphate synthase, at 294,900 to 295,673 _0291 B158DRAFT_0293: B158DRAFT_0293 - thiamine biosynthesis protein ThiS, at 296,292 to 296,489 _0293 B158DRAFT_0294: B158DRAFT_0294 - glycine oxidase (EC 1.4.3.19), at 296,473 to 297,528 _0294 Position (kb) 294 295 296Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 293.901 kb on - strand, within B158DRAFT_0290at 293.938 kb on - strand, within B158DRAFT_0290at 293.958 kb on - strand, within B158DRAFT_0290at 293.960 kb on + strandat 293.968 kb on + strand, within B158DRAFT_0290at 294.070 kb on + strand, within B158DRAFT_0290at 294.077 kb on - strand, within B158DRAFT_0290at 294.084 kb on + strand, within B158DRAFT_0290at 294.084 kb on + strand, within B158DRAFT_0290at 294.084 kb on + strand, within B158DRAFT_0290at 294.084 kb on + strand, within B158DRAFT_0290at 294.089 kb on + strand, within B158DRAFT_0290at 294.092 kb on - strand, within B158DRAFT_0290at 294.092 kb on - strand, within B158DRAFT_0290at 294.092 kb on - strand, within B158DRAFT_0290at 294.110 kb on + strand, within B158DRAFT_0290at 294.142 kb on - strand, within B158DRAFT_0290at 294.171 kb on - strand, within B158DRAFT_0290at 294.223 kb on - strand, within B158DRAFT_0290at 294.245 kb on + strand, within B158DRAFT_0290at 294.361 kb on + strand, within B158DRAFT_0290at 294.368 kb on + strand, within B158DRAFT_0290at 294.368 kb on + strand, within B158DRAFT_0290at 294.376 kb on - strand, within B158DRAFT_0290at 294.407 kb on + strand, within B158DRAFT_0290at 294.407 kb on + strand, within B158DRAFT_0290at 294.407 kb on + strand, within B158DRAFT_0290at 294.412 kb on + strand, within B158DRAFT_0290at 294.415 kb on - strand, within B158DRAFT_0290at 294.415 kb on - strand, within B158DRAFT_0290at 294.453 kb on + strand, within B158DRAFT_0290at 294.639 kb on + strand, within B158DRAFT_0290at 294.644 kb on + strand, within B158DRAFT_0290at 294.647 kb on - strand, within B158DRAFT_0290at 294.649 kb on + strand, within B158DRAFT_0290at 294.657 kb on + strand, within B158DRAFT_0290at 294.657 kb on + strand, within B158DRAFT_0290at 294.657 kb on - strand, within B158DRAFT_0290at 294.657 kb on - strand, within B158DRAFT_0290at 294.687 kb on + strand, within B158DRAFT_0290at 294.734 kb on + strand, within B158DRAFT_0290at 294.818 kb on + strandat 294.826 kb on - strandat 294.851 kb on + strandat 294.851 kb on + strandat 294.859 kb on - strandat 294.859 kb on - strandat 294.859 kb on - strandat 294.861 kb on + strandat 294.935 kb on - strandat 294.935 kb on - strandat 294.940 kb on + strandat 294.948 kb on - strandat 294.973 kb on + strandat 294.988 kb on + strand, within B158DRAFT_0291at 294.988 kb on + strand, within B158DRAFT_0291at 294.996 kb on - strand, within B158DRAFT_0291at 294.996 kb on - strand, within B158DRAFT_0291at 294.996 kb on - strand, within B158DRAFT_0291at 295.039 kb on + strand, within B158DRAFT_0291at 295.050 kb on - strand, within B158DRAFT_0291at 295.068 kb on + strand, within B158DRAFT_0291at 295.068 kb on + strand, within B158DRAFT_0291at 295.098 kb on + strand, within B158DRAFT_0291at 295.101 kb on - strand, within B158DRAFT_0291at 295.122 kb on + strand, within B158DRAFT_0291at 295.122 kb on + strand, within B158DRAFT_0291at 295.122 kb on + strand, within B158DRAFT_0291at 295.122 kb on + strand, within B158DRAFT_0291at 295.122 kb on + strand, within B158DRAFT_0291at 295.122 kb on + strand, within B158DRAFT_0291at 295.130 kb on - strand, within B158DRAFT_0291at 295.130 kb on - strand, within B158DRAFT_0291at 295.130 kb on - strand, within B158DRAFT_0291at 295.130 kb on - strand, within B158DRAFT_0291at 295.130 kb on - strand, within B158DRAFT_0291at 295.130 kb on - strand, within B158DRAFT_0291at 295.130 kb on - strand, within B158DRAFT_0291at 295.130 kb on - strand, within B158DRAFT_0291at 295.200 kb on + strand, within B158DRAFT_0291at 295.312 kb on - strand, within B158DRAFT_0291at 295.394 kb on + strand, within B158DRAFT_0291at 295.402 kb on - strand, within B158DRAFT_0291at 295.474 kb on + strand, within B158DRAFT_0291at 295.530 kb on + strand, within B158DRAFT_0291at 295.538 kb on - strand, within B158DRAFT_0291at 295.538 kb on - strand, within B158DRAFT_0291at 295.539 kb on - strand, within B158DRAFT_0291at 295.564 kb on + strand, within B158DRAFT_0291at 295.939 kb on - strandat 295.939 kb on - strandat 295.954 kb on + strandat 295.968 kb on + strandat 295.968 kb on + strandat 295.976 kb on - strandat 295.984 kb on - strandat 296.440 kb on - strand, within B158DRAFT_0293at 296.440 kb on - strand, within B158DRAFT_0293at 296.440 kb on - strand, within B158DRAFT_0293at 296.629 kb on + strand, within B158DRAFT_0294

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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293,901 - B158DRAFT_0290 0.32 -1.1
293,938 - B158DRAFT_0290 0.35 -2.1
293,958 - B158DRAFT_0290 0.36 -1.8
293,960 + -0.1
293,968 + B158DRAFT_0290 0.37 -3.3
294,070 + B158DRAFT_0290 0.44 -2.3
294,077 - B158DRAFT_0290 0.44 -1.8
294,084 + B158DRAFT_0290 0.45 -2.9
294,084 + B158DRAFT_0290 0.45 -2.5
294,084 + B158DRAFT_0290 0.45 -2.0
294,084 + B158DRAFT_0290 0.45 -2.1
294,089 + B158DRAFT_0290 0.45 -1.3
294,092 - B158DRAFT_0290 0.45 -2.0
294,092 - B158DRAFT_0290 0.45 -1.6
294,092 - B158DRAFT_0290 0.45 -1.8
294,110 + B158DRAFT_0290 0.46 -1.6
294,142 - B158DRAFT_0290 0.49 -1.6
294,171 - B158DRAFT_0290 0.51 -2.4
294,223 - B158DRAFT_0290 0.54 -1.1
294,245 + B158DRAFT_0290 0.56 -1.8
294,361 + B158DRAFT_0290 0.63 -2.5
294,368 + B158DRAFT_0290 0.64 -2.0
294,368 + B158DRAFT_0290 0.64 -1.8
294,376 - B158DRAFT_0290 0.64 -2.5
294,407 + B158DRAFT_0290 0.66 -2.4
294,407 + B158DRAFT_0290 0.66 -0.3
294,407 + B158DRAFT_0290 0.66 -1.8
294,412 + B158DRAFT_0290 0.67 -1.0
294,415 - B158DRAFT_0290 0.67 -3.0
294,415 - B158DRAFT_0290 0.67 -1.5
294,453 + B158DRAFT_0290 0.70 -0.1
294,639 + B158DRAFT_0290 0.82 -2.6
294,644 + B158DRAFT_0290 0.82 -2.0
294,647 - B158DRAFT_0290 0.83 -1.9
294,649 + B158DRAFT_0290 0.83 -2.3
294,657 + B158DRAFT_0290 0.83 -1.5
294,657 + B158DRAFT_0290 0.83 -2.2
294,657 - B158DRAFT_0290 0.83 -3.2
294,657 - B158DRAFT_0290 0.83 -0.9
294,687 + B158DRAFT_0290 0.85 -2.0
294,734 + B158DRAFT_0290 0.89 -2.5
294,818 + -0.1
294,826 - -2.1
294,851 + -2.7
294,851 + -3.3
294,859 - -1.1
294,859 - -2.0
294,859 - -1.7
294,861 + -1.6
294,935 - -1.8
294,935 - -1.2
294,940 + -1.8
294,948 - -1.3
294,973 + -2.8
294,988 + B158DRAFT_0291 0.11 -2.2
294,988 + B158DRAFT_0291 0.11 -1.5
294,996 - B158DRAFT_0291 0.12 -2.1
294,996 - B158DRAFT_0291 0.12 -1.5
294,996 - B158DRAFT_0291 0.12 -2.8
295,039 + B158DRAFT_0291 0.18 -2.3
295,050 - B158DRAFT_0291 0.19 -1.5
295,068 + B158DRAFT_0291 0.22 -2.5
295,068 + B158DRAFT_0291 0.22 -2.8
295,098 + B158DRAFT_0291 0.26 -1.7
295,101 - B158DRAFT_0291 0.26 -1.5
295,122 + B158DRAFT_0291 0.29 -0.4
295,122 + B158DRAFT_0291 0.29 -0.7
295,122 + B158DRAFT_0291 0.29 -1.4
295,122 + B158DRAFT_0291 0.29 -1.4
295,122 + B158DRAFT_0291 0.29 -0.9
295,122 + B158DRAFT_0291 0.29 -1.3
295,130 - B158DRAFT_0291 0.30 -1.8
295,130 - B158DRAFT_0291 0.30 -2.2
295,130 - B158DRAFT_0291 0.30 -1.2
295,130 - B158DRAFT_0291 0.30 -2.6
295,130 - B158DRAFT_0291 0.30 -1.8
295,130 - B158DRAFT_0291 0.30 -1.5
295,130 - B158DRAFT_0291 0.30 -1.2
295,130 - B158DRAFT_0291 0.30 -1.5
295,200 + B158DRAFT_0291 0.39 -1.1
295,312 - B158DRAFT_0291 0.53 -0.7
295,394 + B158DRAFT_0291 0.64 -2.5
295,402 - B158DRAFT_0291 0.65 -1.5
295,474 + B158DRAFT_0291 0.74 -2.0
295,530 + B158DRAFT_0291 0.81 -2.4
295,538 - B158DRAFT_0291 0.82 -2.0
295,538 - B158DRAFT_0291 0.82 -1.8
295,539 - B158DRAFT_0291 0.83 -0.6
295,564 + B158DRAFT_0291 0.86 -0.5
295,939 - -0.3
295,939 - +0.3
295,954 + -1.9
295,968 + -2.0
295,968 + -1.5
295,976 - +1.3
295,984 - +0.2
296,440 - B158DRAFT_0293 0.75 -2.3
296,440 - B158DRAFT_0293 0.75 -4.0
296,440 - B158DRAFT_0293 0.75 -1.7
296,629 + B158DRAFT_0294 0.15 -1.2

Or see this region's nucleotide sequence