Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0132 and B158DRAFT_0133 are separated by 62 nucleotides B158DRAFT_0133 and B158DRAFT_0134 are separated by 70 nucleotides B158DRAFT_0134 and B158DRAFT_0135 are separated by 35 nucleotides B158DRAFT_0135 and B158DRAFT_0136 are separated by 27 nucleotides
B158DRAFT_0132: B158DRAFT_0132 - hypothetical protein, at 130,352 to 131,191
_0132
B158DRAFT_0133: B158DRAFT_0133 - Uncharacterized iron-regulated protein, at 131,254 to 131,937
_0133
B158DRAFT_0134: B158DRAFT_0134 - Heme/copper-type cytochrome/quinol oxidase, subunit 3, at 132,008 to 132,880
_0134
B158DRAFT_0135: B158DRAFT_0135 - Cytochrome oxidase assembly factor, at 132,916 to 133,485
_0135
B158DRAFT_0136: B158DRAFT_0136 - cytochrome c oxidase, subunit I, at 133,513 to 135,072
_0136
Position (kb) 132
133 Strain fitness (log2 ratio) -2
-1
0
1 at 131.021 kb on + strand, within B158DRAFT_0132 at 131.021 kb on + strand, within B158DRAFT_0132 at 131.029 kb on - strand, within B158DRAFT_0132 at 131.029 kb on - strand, within B158DRAFT_0132 at 131.029 kb on - strand, within B158DRAFT_0132 at 131.036 kb on + strand, within B158DRAFT_0132 at 131.041 kb on + strand, within B158DRAFT_0132 at 131.049 kb on - strand, within B158DRAFT_0132 at 131.049 kb on - strand, within B158DRAFT_0132 at 131.049 kb on - strand, within B158DRAFT_0132 at 131.049 kb on - strand, within B158DRAFT_0132 at 131.049 kb on - strand, within B158DRAFT_0132 at 131.049 kb on - strand, within B158DRAFT_0132 at 131.054 kb on - strand, within B158DRAFT_0132 at 131.056 kb on + strand, within B158DRAFT_0132 at 131.056 kb on + strand, within B158DRAFT_0132 at 131.056 kb on + strand, within B158DRAFT_0132 at 131.087 kb on + strand, within B158DRAFT_0132 at 131.152 kb on - strand at 131.154 kb on + strand at 131.164 kb on - strand at 131.201 kb on - strand at 131.318 kb on + strand at 131.318 kb on + strand at 131.326 kb on - strand, within B158DRAFT_0133 at 131.328 kb on + strand, within B158DRAFT_0133 at 131.375 kb on + strand, within B158DRAFT_0133 at 131.377 kb on + strand, within B158DRAFT_0133 at 131.377 kb on + strand, within B158DRAFT_0133 at 131.377 kb on + strand, within B158DRAFT_0133 at 131.377 kb on + strand, within B158DRAFT_0133 at 131.383 kb on - strand, within B158DRAFT_0133 at 131.383 kb on - strand, within B158DRAFT_0133 at 131.385 kb on - strand, within B158DRAFT_0133 at 131.385 kb on - strand, within B158DRAFT_0133 at 131.391 kb on - strand, within B158DRAFT_0133 at 131.419 kb on + strand, within B158DRAFT_0133 at 131.443 kb on + strand, within B158DRAFT_0133 at 131.519 kb on + strand, within B158DRAFT_0133 at 131.626 kb on - strand, within B158DRAFT_0133 at 131.634 kb on - strand, within B158DRAFT_0133 at 131.634 kb on - strand, within B158DRAFT_0133 at 131.663 kb on - strand, within B158DRAFT_0133 at 131.694 kb on + strand, within B158DRAFT_0133 at 131.712 kb on + strand, within B158DRAFT_0133 at 131.841 kb on + strand, within B158DRAFT_0133 at 131.849 kb on - strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.868 kb on + strand, within B158DRAFT_0133 at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.876 kb on - strand at 131.891 kb on - strand at 131.940 kb on - strand at 131.940 kb on - strand at 132.014 kb on - strand at 132.034 kb on + strand at 132.039 kb on + strand at 132.139 kb on - strand, within B158DRAFT_0134 at 132.276 kb on + strand, within B158DRAFT_0134 at 132.284 kb on - strand, within B158DRAFT_0134 at 132.319 kb on + strand, within B158DRAFT_0134 at 132.327 kb on - strand, within B158DRAFT_0134 at 132.419 kb on - strand, within B158DRAFT_0134 at 132.481 kb on - strand, within B158DRAFT_0134 at 132.644 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.758 kb on + strand, within B158DRAFT_0134 at 132.766 kb on - strand, within B158DRAFT_0134 at 132.767 kb on + strand, within B158DRAFT_0134 at 132.767 kb on + strand, within B158DRAFT_0134 at 132.886 kb on - strand at 132.890 kb on + strand at 132.898 kb on - strand at 132.908 kb on - strand at 132.908 kb on - strand at 132.908 kb on - strand at 132.908 kb on - strand at 132.913 kb on + strand at 132.965 kb on + strand at 132.965 kb on + strand at 132.965 kb on + strand at 132.965 kb on + strand at 132.973 kb on - strand, within B158DRAFT_0135 at 132.973 kb on - strand, within B158DRAFT_0135 at 132.973 kb on - strand, within B158DRAFT_0135 at 133.011 kb on - strand, within B158DRAFT_0135 at 133.011 kb on - strand, within B158DRAFT_0135 at 133.073 kb on - strand, within B158DRAFT_0135 at 133.147 kb on + strand, within B158DRAFT_0135 at 133.155 kb on - strand, within B158DRAFT_0135 at 133.199 kb on + strand, within B158DRAFT_0135 at 133.205 kb on + strand, within B158DRAFT_0135 at 133.206 kb on + strand, within B158DRAFT_0135 at 133.207 kb on - strand, within B158DRAFT_0135 at 133.317 kb on + strand, within B158DRAFT_0135 at 133.317 kb on + strand, within B158DRAFT_0135 at 133.325 kb on - strand, within B158DRAFT_0135 at 133.410 kb on + strand, within B158DRAFT_0135 at 133.440 kb on - strand at 133.483 kb on - strand at 133.506 kb on + strand at 133.575 kb on + strand at 133.583 kb on - strand at 133.584 kb on + strand at 133.640 kb on + strand at 133.669 kb on - strand, within B158DRAFT_0136 at 133.669 kb on - strand, within B158DRAFT_0136 at 133.680 kb on - strand, within B158DRAFT_0136 at 133.692 kb on + strand, within B158DRAFT_0136 at 133.700 kb on - strand, within B158DRAFT_0136 at 133.762 kb on + strand, within B158DRAFT_0136
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 131,021 + B158DRAFT_0132 0.80 +0.2 131,021 + B158DRAFT_0132 0.80 -0.3 131,029 - B158DRAFT_0132 0.81 +0.5 131,029 - B158DRAFT_0132 0.81 +0.1 131,029 - B158DRAFT_0132 0.81 +0.8 131,036 + B158DRAFT_0132 0.81 +0.1 131,041 + B158DRAFT_0132 0.82 +0.5 131,049 - B158DRAFT_0132 0.83 +0.0 131,049 - B158DRAFT_0132 0.83 -0.4 131,049 - B158DRAFT_0132 0.83 +0.1 131,049 - B158DRAFT_0132 0.83 +0.8 131,049 - B158DRAFT_0132 0.83 +0.6 131,049 - B158DRAFT_0132 0.83 +0.6 131,054 - B158DRAFT_0132 0.84 +0.4 131,056 + B158DRAFT_0132 0.84 -0.7 131,056 + B158DRAFT_0132 0.84 +0.2 131,056 + B158DRAFT_0132 0.84 -0.0 131,087 + B158DRAFT_0132 0.88 -0.2 131,152 - +0.2 131,154 + -0.2 131,164 - +0.3 131,201 - -0.2 131,318 + +0.5 131,318 + +0.2 131,326 - B158DRAFT_0133 0.11 +0.5 131,328 + B158DRAFT_0133 0.11 +0.2 131,375 + B158DRAFT_0133 0.18 +0.6 131,377 + B158DRAFT_0133 0.18 +0.1 131,377 + B158DRAFT_0133 0.18 +0.2 131,377 + B158DRAFT_0133 0.18 -0.4 131,377 + B158DRAFT_0133 0.18 +0.6 131,383 - B158DRAFT_0133 0.19 +0.5 131,383 - B158DRAFT_0133 0.19 +0.3 131,385 - B158DRAFT_0133 0.19 +0.1 131,385 - B158DRAFT_0133 0.19 +0.1 131,391 - B158DRAFT_0133 0.20 +0.2 131,419 + B158DRAFT_0133 0.24 +0.1 131,443 + B158DRAFT_0133 0.28 +0.7 131,519 + B158DRAFT_0133 0.39 +0.1 131,626 - B158DRAFT_0133 0.54 +0.0 131,634 - B158DRAFT_0133 0.56 +0.6 131,634 - B158DRAFT_0133 0.56 +0.0 131,663 - B158DRAFT_0133 0.60 +0.2 131,694 + B158DRAFT_0133 0.64 +0.2 131,712 + B158DRAFT_0133 0.67 +0.3 131,841 + B158DRAFT_0133 0.86 +0.6 131,849 - B158DRAFT_0133 0.87 -0.4 131,868 + B158DRAFT_0133 0.90 +0.1 131,868 + B158DRAFT_0133 0.90 -0.4 131,868 + B158DRAFT_0133 0.90 +0.5 131,868 + B158DRAFT_0133 0.90 +0.8 131,868 + B158DRAFT_0133 0.90 -0.2 131,868 + B158DRAFT_0133 0.90 +0.8 131,868 + B158DRAFT_0133 0.90 +0.3 131,868 + B158DRAFT_0133 0.90 -0.1 131,868 + B158DRAFT_0133 0.90 +0.2 131,868 + B158DRAFT_0133 0.90 -0.1 131,868 + B158DRAFT_0133 0.90 -0.0 131,868 + B158DRAFT_0133 0.90 -0.1 131,868 + B158DRAFT_0133 0.90 -0.3 131,868 + B158DRAFT_0133 0.90 -0.1 131,868 + B158DRAFT_0133 0.90 -0.5 131,868 + B158DRAFT_0133 0.90 +0.2 131,868 + B158DRAFT_0133 0.90 +0.5 131,868 + B158DRAFT_0133 0.90 +0.5 131,868 + B158DRAFT_0133 0.90 +0.1 131,868 + B158DRAFT_0133 0.90 -0.0 131,868 + B158DRAFT_0133 0.90 +0.4 131,868 + B158DRAFT_0133 0.90 -0.2 131,876 - +0.5 131,876 - +0.3 131,876 - +0.3 131,876 - +0.3 131,876 - -0.7 131,876 - +0.6 131,876 - +0.3 131,876 - -0.0 131,876 - +0.1 131,876 - -0.0 131,876 - +0.7 131,876 - -0.2 131,876 - -0.3 131,876 - +0.3 131,876 - -0.4 131,891 - -0.2 131,940 - +0.1 131,940 - +0.6 132,014 - -0.4 132,034 + -0.3 132,039 + -0.3 132,139 - B158DRAFT_0134 0.15 -0.4 132,276 + B158DRAFT_0134 0.31 -1.9 132,284 - B158DRAFT_0134 0.32 -0.4 132,319 + B158DRAFT_0134 0.36 -0.4 132,327 - B158DRAFT_0134 0.37 -1.7 132,419 - B158DRAFT_0134 0.47 -0.4 132,481 - B158DRAFT_0134 0.54 -0.2 132,644 + B158DRAFT_0134 0.73 -1.5 132,656 + B158DRAFT_0134 0.74 -0.0 132,656 + B158DRAFT_0134 0.74 -1.5 132,656 + B158DRAFT_0134 0.74 -1.2 132,656 + B158DRAFT_0134 0.74 -1.2 132,656 + B158DRAFT_0134 0.74 -1.6 132,656 + B158DRAFT_0134 0.74 -0.8 132,656 + B158DRAFT_0134 0.74 -0.2 132,656 + B158DRAFT_0134 0.74 -0.7 132,656 + B158DRAFT_0134 0.74 -1.2 132,656 + B158DRAFT_0134 0.74 -0.6 132,664 - B158DRAFT_0134 0.75 -1.2 132,664 - B158DRAFT_0134 0.75 -1.4 132,664 - B158DRAFT_0134 0.75 -1.0 132,664 - B158DRAFT_0134 0.75 -1.2 132,664 - B158DRAFT_0134 0.75 -0.5 132,664 - B158DRAFT_0134 0.75 -0.4 132,664 - B158DRAFT_0134 0.75 -2.2 132,758 + B158DRAFT_0134 0.86 -1.4 132,766 - B158DRAFT_0134 0.87 -0.4 132,767 + B158DRAFT_0134 0.87 -2.0 132,767 + B158DRAFT_0134 0.87 -0.9 132,886 - -0.4 132,890 + -0.4 132,898 - -0.4 132,908 - -1.5 132,908 - -0.2 132,908 - -0.9 132,908 - -0.9 132,913 + -0.6 132,965 + -0.3 132,965 + -0.3 132,965 + -0.7 132,965 + -0.6 132,973 - B158DRAFT_0135 0.10 -0.6 132,973 - B158DRAFT_0135 0.10 -2.2 132,973 - B158DRAFT_0135 0.10 -0.4 133,011 - B158DRAFT_0135 0.17 -0.9 133,011 - B158DRAFT_0135 0.17 -0.9 133,073 - B158DRAFT_0135 0.28 -0.7 133,147 + B158DRAFT_0135 0.41 -0.7 133,155 - B158DRAFT_0135 0.42 -0.1 133,199 + B158DRAFT_0135 0.50 -0.7 133,205 + B158DRAFT_0135 0.51 -0.3 133,206 + B158DRAFT_0135 0.51 -0.4 133,207 - B158DRAFT_0135 0.51 -0.9 133,317 + B158DRAFT_0135 0.70 -0.0 133,317 + B158DRAFT_0135 0.70 -1.9 133,325 - B158DRAFT_0135 0.72 -0.7 133,410 + B158DRAFT_0135 0.87 -1.4 133,440 - -1.2 133,483 - -0.2 133,506 + -2.7 133,575 + -0.6 133,583 - -1.4 133,584 + -1.6 133,640 + -1.3 133,669 - B158DRAFT_0136 0.10 -1.1 133,669 - B158DRAFT_0136 0.10 -1.6 133,680 - B158DRAFT_0136 0.11 -1.1 133,692 + B158DRAFT_0136 0.11 -1.0 133,700 - B158DRAFT_0136 0.12 -0.7 133,762 + B158DRAFT_0136 0.16 -1.3
Or see this region's nucleotide sequence