Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0120

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0118 and B158DRAFT_0119 are separated by 42 nucleotidesB158DRAFT_0119 and B158DRAFT_0120 overlap by 4 nucleotidesB158DRAFT_0120 and B158DRAFT_0121 overlap by 1 nucleotides B158DRAFT_0118: B158DRAFT_0118 - NADH dehydrogenase subunit J (EC 1.6.5.3), at 115,480 to 116,160 _0118 B158DRAFT_0119: B158DRAFT_0119 - NADH dehydrogenase subunit I (EC 1.6.5.3), at 116,203 to 116,694 _0119 B158DRAFT_0120: B158DRAFT_0120 - NADH dehydrogenase subunit H (EC 1.6.5.3), at 116,691 to 117,731 _0120 B158DRAFT_0121: B158DRAFT_0121 - NADH-quinone oxidoreductase, chain G, at 117,731 to 119,974 _0121 Position (kb) 116 117 118Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 115.736 kb on + strand, within B158DRAFT_0118at 115.736 kb on + strand, within B158DRAFT_0118at 115.736 kb on + strand, within B158DRAFT_0118at 115.749 kb on + strand, within B158DRAFT_0118at 115.757 kb on + strand, within B158DRAFT_0118at 115.758 kb on - strand, within B158DRAFT_0118at 115.768 kb on + strand, within B158DRAFT_0118at 115.824 kb on - strand, within B158DRAFT_0118at 115.889 kb on - strand, within B158DRAFT_0118at 115.905 kb on + strand, within B158DRAFT_0118at 115.905 kb on + strand, within B158DRAFT_0118at 115.905 kb on + strand, within B158DRAFT_0118at 115.913 kb on - strand, within B158DRAFT_0118at 115.913 kb on - strand, within B158DRAFT_0118at 115.913 kb on - strand, within B158DRAFT_0118at 115.913 kb on - strand, within B158DRAFT_0118at 115.915 kb on + strand, within B158DRAFT_0118at 115.954 kb on - strand, within B158DRAFT_0118at 115.973 kb on + strand, within B158DRAFT_0118at 115.978 kb on + strand, within B158DRAFT_0118at 115.981 kb on - strand, within B158DRAFT_0118at 115.981 kb on - strand, within B158DRAFT_0118at 115.981 kb on - strand, within B158DRAFT_0118at 116.031 kb on - strand, within B158DRAFT_0118at 116.059 kb on + strand, within B158DRAFT_0118at 116.067 kb on - strand, within B158DRAFT_0118at 116.090 kb on + strand, within B158DRAFT_0118at 116.098 kb on + strandat 116.119 kb on - strandat 116.155 kb on + strandat 116.199 kb on - strandat 116.201 kb on + strandat 116.387 kb on + strand, within B158DRAFT_0119at 116.434 kb on - strand, within B158DRAFT_0119at 116.482 kb on - strand, within B158DRAFT_0119at 116.549 kb on + strand, within B158DRAFT_0119at 116.549 kb on + strand, within B158DRAFT_0119at 116.557 kb on - strand, within B158DRAFT_0119at 116.568 kb on - strand, within B158DRAFT_0119at 116.587 kb on + strand, within B158DRAFT_0119at 116.587 kb on + strand, within B158DRAFT_0119at 116.616 kb on + strand, within B158DRAFT_0119at 116.616 kb on + strand, within B158DRAFT_0119at 116.639 kb on + strand, within B158DRAFT_0119at 116.697 kb on - strandat 116.729 kb on - strandat 116.745 kb on + strandat 116.786 kb on - strandat 116.801 kb on - strand, within B158DRAFT_0120at 116.832 kb on + strand, within B158DRAFT_0120at 116.832 kb on + strand, within B158DRAFT_0120at 116.892 kb on - strand, within B158DRAFT_0120at 116.937 kb on - strand, within B158DRAFT_0120at 116.944 kb on + strand, within B158DRAFT_0120at 116.949 kb on - strand, within B158DRAFT_0120at 117.011 kb on - strand, within B158DRAFT_0120at 117.024 kb on - strand, within B158DRAFT_0120at 117.026 kb on + strand, within B158DRAFT_0120at 117.034 kb on - strand, within B158DRAFT_0120at 117.082 kb on + strand, within B158DRAFT_0120at 117.090 kb on - strand, within B158DRAFT_0120at 117.090 kb on - strand, within B158DRAFT_0120at 117.092 kb on + strand, within B158DRAFT_0120at 117.112 kb on + strand, within B158DRAFT_0120at 117.189 kb on + strand, within B158DRAFT_0120at 117.258 kb on + strand, within B158DRAFT_0120at 117.259 kb on - strand, within B158DRAFT_0120at 117.259 kb on - strand, within B158DRAFT_0120at 117.259 kb on - strand, within B158DRAFT_0120at 117.362 kb on - strand, within B158DRAFT_0120at 117.383 kb on + strand, within B158DRAFT_0120at 117.385 kb on + strand, within B158DRAFT_0120at 117.385 kb on + strand, within B158DRAFT_0120at 117.400 kb on + strand, within B158DRAFT_0120at 117.400 kb on + strand, within B158DRAFT_0120at 117.408 kb on - strand, within B158DRAFT_0120at 117.435 kb on + strand, within B158DRAFT_0120at 117.549 kb on + strand, within B158DRAFT_0120at 117.556 kb on + strand, within B158DRAFT_0120at 117.556 kb on + strand, within B158DRAFT_0120at 117.556 kb on + strand, within B158DRAFT_0120at 117.564 kb on - strand, within B158DRAFT_0120at 117.571 kb on - strand, within B158DRAFT_0120at 117.574 kb on + strand, within B158DRAFT_0120at 117.581 kb on + strand, within B158DRAFT_0120at 117.588 kb on - strand, within B158DRAFT_0120at 117.646 kb on + strandat 117.646 kb on + strandat 117.654 kb on - strandat 117.654 kb on - strandat 117.654 kb on - strandat 117.654 kb on - strandat 117.654 kb on - strandat 117.766 kb on + strandat 117.766 kb on + strandat 117.776 kb on + strandat 117.784 kb on - strandat 117.832 kb on + strandat 117.840 kb on - strandat 117.840 kb on - strandat 117.865 kb on + strandat 117.865 kb on + strandat 117.865 kb on + strandat 117.865 kb on + strandat 117.870 kb on + strandat 117.873 kb on - strandat 117.923 kb on - strandat 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.111 kb on + strand, within B158DRAFT_0121at 118.160 kb on + strand, within B158DRAFT_0121at 118.168 kb on - strand, within B158DRAFT_0121at 118.177 kb on + strand, within B158DRAFT_0121at 118.195 kb on - strand, within B158DRAFT_0121at 118.195 kb on - strand, within B158DRAFT_0121at 118.224 kb on + strand, within B158DRAFT_0121at 118.224 kb on + strand, within B158DRAFT_0121at 118.231 kb on - strand, within B158DRAFT_0121at 118.232 kb on - strand, within B158DRAFT_0121at 118.232 kb on - strand, within B158DRAFT_0121at 118.312 kb on - strand, within B158DRAFT_0121at 118.336 kb on + strand, within B158DRAFT_0121at 118.423 kb on - strand, within B158DRAFT_0121at 118.430 kb on + strand, within B158DRAFT_0121at 118.430 kb on + strand, within B158DRAFT_0121at 118.438 kb on - strand, within B158DRAFT_0121at 118.438 kb on - strand, within B158DRAFT_0121at 118.438 kb on - strand, within B158DRAFT_0121at 118.535 kb on + strand, within B158DRAFT_0121at 118.566 kb on + strand, within B158DRAFT_0121at 118.599 kb on + strand, within B158DRAFT_0121at 118.649 kb on - strand, within B158DRAFT_0121at 118.649 kb on - strand, within B158DRAFT_0121at 118.678 kb on + strand, within B158DRAFT_0121at 118.678 kb on + strand, within B158DRAFT_0121at 118.678 kb on + strand, within B158DRAFT_0121at 118.678 kb on + strand, within B158DRAFT_0121at 118.678 kb on + strand, within B158DRAFT_0121at 118.678 kb on + strand, within B158DRAFT_0121at 118.678 kb on + strand, within B158DRAFT_0121at 118.686 kb on - strand, within B158DRAFT_0121at 118.686 kb on - strand, within B158DRAFT_0121at 118.686 kb on - strand, within B158DRAFT_0121

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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115,736 + B158DRAFT_0118 0.38 -2.8
115,736 + B158DRAFT_0118 0.38 -2.1
115,736 + B158DRAFT_0118 0.38 -3.2
115,749 + B158DRAFT_0118 0.40 -3.0
115,757 + B158DRAFT_0118 0.41 -2.0
115,758 - B158DRAFT_0118 0.41 -2.1
115,768 + B158DRAFT_0118 0.42 -3.2
115,824 - B158DRAFT_0118 0.51 -0.7
115,889 - B158DRAFT_0118 0.60 -1.6
115,905 + B158DRAFT_0118 0.62 -3.1
115,905 + B158DRAFT_0118 0.62 -2.6
115,905 + B158DRAFT_0118 0.62 -2.6
115,913 - B158DRAFT_0118 0.64 -0.7
115,913 - B158DRAFT_0118 0.64 -5.2
115,913 - B158DRAFT_0118 0.64 -1.3
115,913 - B158DRAFT_0118 0.64 -2.2
115,915 + B158DRAFT_0118 0.64 -2.8
115,954 - B158DRAFT_0118 0.70 +0.2
115,973 + B158DRAFT_0118 0.72 -3.0
115,978 + B158DRAFT_0118 0.73 -3.2
115,981 - B158DRAFT_0118 0.74 -3.1
115,981 - B158DRAFT_0118 0.74 -2.9
115,981 - B158DRAFT_0118 0.74 -3.1
116,031 - B158DRAFT_0118 0.81 -3.2
116,059 + B158DRAFT_0118 0.85 -4.9
116,067 - B158DRAFT_0118 0.86 -2.2
116,090 + B158DRAFT_0118 0.90 -2.9
116,098 + -3.1
116,119 - -2.2
116,155 + -2.6
116,199 - +0.0
116,201 + -2.4
116,387 + B158DRAFT_0119 0.37 -2.0
116,434 - B158DRAFT_0119 0.47 -4.9
116,482 - B158DRAFT_0119 0.57 -3.7
116,549 + B158DRAFT_0119 0.70 -2.4
116,549 + B158DRAFT_0119 0.70 -3.1
116,557 - B158DRAFT_0119 0.72 -2.5
116,568 - B158DRAFT_0119 0.74 -2.5
116,587 + B158DRAFT_0119 0.78 -3.3
116,587 + B158DRAFT_0119 0.78 -3.4
116,616 + B158DRAFT_0119 0.84 -2.9
116,616 + B158DRAFT_0119 0.84 -4.2
116,639 + B158DRAFT_0119 0.89 -3.1
116,697 - -1.1
116,729 - -1.6
116,745 + -1.0
116,786 - -2.3
116,801 - B158DRAFT_0120 0.11 -2.8
116,832 + B158DRAFT_0120 0.14 -3.3
116,832 + B158DRAFT_0120 0.14 -3.1
116,892 - B158DRAFT_0120 0.19 -1.7
116,937 - B158DRAFT_0120 0.24 -2.2
116,944 + B158DRAFT_0120 0.24 -2.0
116,949 - B158DRAFT_0120 0.25 -2.1
117,011 - B158DRAFT_0120 0.31 -2.7
117,024 - B158DRAFT_0120 0.32 -4.1
117,026 + B158DRAFT_0120 0.32 -3.4
117,034 - B158DRAFT_0120 0.33 -2.6
117,082 + B158DRAFT_0120 0.38 -2.9
117,090 - B158DRAFT_0120 0.38 -3.7
117,090 - B158DRAFT_0120 0.38 -3.2
117,092 + B158DRAFT_0120 0.39 -2.3
117,112 + B158DRAFT_0120 0.40 -2.8
117,189 + B158DRAFT_0120 0.48 -2.8
117,258 + B158DRAFT_0120 0.54 -2.3
117,259 - B158DRAFT_0120 0.55 -3.8
117,259 - B158DRAFT_0120 0.55 -2.8
117,259 - B158DRAFT_0120 0.55 -1.8
117,362 - B158DRAFT_0120 0.64 -2.5
117,383 + B158DRAFT_0120 0.66 -2.5
117,385 + B158DRAFT_0120 0.67 -3.4
117,385 + B158DRAFT_0120 0.67 -2.2
117,400 + B158DRAFT_0120 0.68 -3.5
117,400 + B158DRAFT_0120 0.68 -3.2
117,408 - B158DRAFT_0120 0.69 -2.1
117,435 + B158DRAFT_0120 0.71 -3.0
117,549 + B158DRAFT_0120 0.82 -2.5
117,556 + B158DRAFT_0120 0.83 -3.0
117,556 + B158DRAFT_0120 0.83 -3.7
117,556 + B158DRAFT_0120 0.83 -1.5
117,564 - B158DRAFT_0120 0.84 -3.5
117,571 - B158DRAFT_0120 0.85 -3.2
117,574 + B158DRAFT_0120 0.85 -2.7
117,581 + B158DRAFT_0120 0.85 -2.7
117,588 - B158DRAFT_0120 0.86 -2.5
117,646 + -1.7
117,646 + -2.1
117,654 - -3.1
117,654 - -2.5
117,654 - -3.2
117,654 - -2.8
117,654 - -3.0
117,766 + -3.3
117,766 + -3.6
117,776 + -3.3
117,784 - -0.9
117,832 + -2.6
117,840 - -2.5
117,840 - -2.7
117,865 + -2.5
117,865 + -3.0
117,865 + -2.6
117,865 + -1.8
117,870 + -3.3
117,873 - -1.5
117,923 - -2.2
118,041 + B158DRAFT_0121 0.14 -3.3
118,041 + B158DRAFT_0121 0.14 -3.6
118,041 + B158DRAFT_0121 0.14 -2.6
118,041 + B158DRAFT_0121 0.14 -2.1
118,041 + B158DRAFT_0121 0.14 -3.2
118,041 + B158DRAFT_0121 0.14 -1.6
118,041 + B158DRAFT_0121 0.14 -2.9
118,041 + B158DRAFT_0121 0.14 -2.3
118,041 + B158DRAFT_0121 0.14 -3.0
118,041 + B158DRAFT_0121 0.14 -2.2
118,041 + B158DRAFT_0121 0.14 -3.2
118,049 - B158DRAFT_0121 0.14 -1.8
118,049 - B158DRAFT_0121 0.14 -1.7
118,049 - B158DRAFT_0121 0.14 -1.2
118,049 - B158DRAFT_0121 0.14 -2.1
118,049 - B158DRAFT_0121 0.14 -1.7
118,049 - B158DRAFT_0121 0.14 -1.7
118,049 - B158DRAFT_0121 0.14 -0.3
118,049 - B158DRAFT_0121 0.14 +0.2
118,049 - B158DRAFT_0121 0.14 -1.1
118,049 - B158DRAFT_0121 0.14 -3.0
118,111 + B158DRAFT_0121 0.17 -3.1
118,160 + B158DRAFT_0121 0.19 -2.6
118,168 - B158DRAFT_0121 0.19 -2.1
118,177 + B158DRAFT_0121 0.20 -2.2
118,195 - B158DRAFT_0121 0.21 -2.0
118,195 - B158DRAFT_0121 0.21 -2.6
118,224 + B158DRAFT_0121 0.22 -2.6
118,224 + B158DRAFT_0121 0.22 -3.0
118,231 - B158DRAFT_0121 0.22 -3.0
118,232 - B158DRAFT_0121 0.22 -0.4
118,232 - B158DRAFT_0121 0.22 -1.3
118,312 - B158DRAFT_0121 0.26 -2.1
118,336 + B158DRAFT_0121 0.27 -2.5
118,423 - B158DRAFT_0121 0.31 -1.0
118,430 + B158DRAFT_0121 0.31 -2.6
118,430 + B158DRAFT_0121 0.31 -1.5
118,438 - B158DRAFT_0121 0.32 -1.7
118,438 - B158DRAFT_0121 0.32 -1.1
118,438 - B158DRAFT_0121 0.32 -0.9
118,535 + B158DRAFT_0121 0.36 -5.6
118,566 + B158DRAFT_0121 0.37 -3.0
118,599 + B158DRAFT_0121 0.39 -2.2
118,649 - B158DRAFT_0121 0.41 -1.5
118,649 - B158DRAFT_0121 0.41 -1.9
118,678 + B158DRAFT_0121 0.42 -3.5
118,678 + B158DRAFT_0121 0.42 -3.3
118,678 + B158DRAFT_0121 0.42 -2.7
118,678 + B158DRAFT_0121 0.42 -4.2
118,678 + B158DRAFT_0121 0.42 -2.8
118,678 + B158DRAFT_0121 0.42 -3.2
118,678 + B158DRAFT_0121 0.42 -2.8
118,686 - B158DRAFT_0121 0.43 -1.9
118,686 - B158DRAFT_0121 0.43 -1.2
118,686 - B158DRAFT_0121 0.43 -1.7

Or see this region's nucleotide sequence