Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0118 and B158DRAFT_0119 are separated by 42 nucleotides B158DRAFT_0119 and B158DRAFT_0120 overlap by 4 nucleotides B158DRAFT_0120 and B158DRAFT_0121 overlap by 1 nucleotides
B158DRAFT_0118: B158DRAFT_0118 - NADH dehydrogenase subunit J (EC 1.6.5.3), at 115,480 to 116,160
_0118
B158DRAFT_0119: B158DRAFT_0119 - NADH dehydrogenase subunit I (EC 1.6.5.3), at 116,203 to 116,694
_0119
B158DRAFT_0120: B158DRAFT_0120 - NADH dehydrogenase subunit H (EC 1.6.5.3), at 116,691 to 117,731
_0120
B158DRAFT_0121: B158DRAFT_0121 - NADH-quinone oxidoreductase, chain G, at 117,731 to 119,974
_0121
Position (kb)
116
117
118 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 115.736 kb on + strand, within B158DRAFT_0118 at 115.736 kb on + strand, within B158DRAFT_0118 at 115.736 kb on + strand, within B158DRAFT_0118 at 115.749 kb on + strand, within B158DRAFT_0118 at 115.757 kb on + strand, within B158DRAFT_0118 at 115.758 kb on - strand, within B158DRAFT_0118 at 115.768 kb on + strand, within B158DRAFT_0118 at 115.824 kb on - strand, within B158DRAFT_0118 at 115.889 kb on - strand, within B158DRAFT_0118 at 115.905 kb on + strand, within B158DRAFT_0118 at 115.905 kb on + strand, within B158DRAFT_0118 at 115.905 kb on + strand, within B158DRAFT_0118 at 115.913 kb on - strand, within B158DRAFT_0118 at 115.913 kb on - strand, within B158DRAFT_0118 at 115.913 kb on - strand, within B158DRAFT_0118 at 115.913 kb on - strand, within B158DRAFT_0118 at 115.915 kb on + strand, within B158DRAFT_0118 at 115.954 kb on - strand, within B158DRAFT_0118 at 115.973 kb on + strand, within B158DRAFT_0118 at 115.978 kb on + strand, within B158DRAFT_0118 at 115.981 kb on - strand, within B158DRAFT_0118 at 115.981 kb on - strand, within B158DRAFT_0118 at 115.981 kb on - strand, within B158DRAFT_0118 at 116.031 kb on - strand, within B158DRAFT_0118 at 116.059 kb on + strand, within B158DRAFT_0118 at 116.067 kb on - strand, within B158DRAFT_0118 at 116.090 kb on + strand, within B158DRAFT_0118 at 116.098 kb on + strand at 116.119 kb on - strand at 116.155 kb on + strand at 116.199 kb on - strand at 116.201 kb on + strand at 116.387 kb on + strand, within B158DRAFT_0119 at 116.434 kb on - strand, within B158DRAFT_0119 at 116.482 kb on - strand, within B158DRAFT_0119 at 116.549 kb on + strand, within B158DRAFT_0119 at 116.549 kb on + strand, within B158DRAFT_0119 at 116.557 kb on - strand, within B158DRAFT_0119 at 116.568 kb on - strand, within B158DRAFT_0119 at 116.587 kb on + strand, within B158DRAFT_0119 at 116.587 kb on + strand, within B158DRAFT_0119 at 116.616 kb on + strand, within B158DRAFT_0119 at 116.616 kb on + strand, within B158DRAFT_0119 at 116.639 kb on + strand, within B158DRAFT_0119 at 116.697 kb on - strand at 116.729 kb on - strand at 116.745 kb on + strand at 116.786 kb on - strand at 116.801 kb on - strand, within B158DRAFT_0120 at 116.832 kb on + strand, within B158DRAFT_0120 at 116.832 kb on + strand, within B158DRAFT_0120 at 116.892 kb on - strand, within B158DRAFT_0120 at 116.937 kb on - strand, within B158DRAFT_0120 at 116.944 kb on + strand, within B158DRAFT_0120 at 116.949 kb on - strand, within B158DRAFT_0120 at 117.011 kb on - strand, within B158DRAFT_0120 at 117.024 kb on - strand, within B158DRAFT_0120 at 117.026 kb on + strand, within B158DRAFT_0120 at 117.034 kb on - strand, within B158DRAFT_0120 at 117.082 kb on + strand, within B158DRAFT_0120 at 117.090 kb on - strand, within B158DRAFT_0120 at 117.090 kb on - strand, within B158DRAFT_0120 at 117.092 kb on + strand, within B158DRAFT_0120 at 117.112 kb on + strand, within B158DRAFT_0120 at 117.189 kb on + strand, within B158DRAFT_0120 at 117.258 kb on + strand, within B158DRAFT_0120 at 117.259 kb on - strand, within B158DRAFT_0120 at 117.259 kb on - strand, within B158DRAFT_0120 at 117.259 kb on - strand, within B158DRAFT_0120 at 117.362 kb on - strand, within B158DRAFT_0120 at 117.383 kb on + strand, within B158DRAFT_0120 at 117.385 kb on + strand, within B158DRAFT_0120 at 117.385 kb on + strand, within B158DRAFT_0120 at 117.400 kb on + strand, within B158DRAFT_0120 at 117.400 kb on + strand, within B158DRAFT_0120 at 117.408 kb on - strand, within B158DRAFT_0120 at 117.435 kb on + strand, within B158DRAFT_0120 at 117.549 kb on + strand, within B158DRAFT_0120 at 117.556 kb on + strand, within B158DRAFT_0120 at 117.556 kb on + strand, within B158DRAFT_0120 at 117.556 kb on + strand, within B158DRAFT_0120 at 117.564 kb on - strand, within B158DRAFT_0120 at 117.571 kb on - strand, within B158DRAFT_0120 at 117.574 kb on + strand, within B158DRAFT_0120 at 117.581 kb on + strand, within B158DRAFT_0120 at 117.588 kb on - strand, within B158DRAFT_0120 at 117.646 kb on + strand at 117.646 kb on + strand at 117.654 kb on - strand at 117.654 kb on - strand at 117.654 kb on - strand at 117.654 kb on - strand at 117.654 kb on - strand at 117.766 kb on + strand at 117.766 kb on + strand at 117.776 kb on + strand at 117.784 kb on - strand at 117.832 kb on + strand at 117.840 kb on - strand at 117.840 kb on - strand at 117.865 kb on + strand at 117.865 kb on + strand at 117.865 kb on + strand at 117.865 kb on + strand at 117.870 kb on + strand at 117.873 kb on - strand at 117.923 kb on - strand at 118.041 kb on + strand, within B158DRAFT_0121 at 118.041 kb on + strand, within B158DRAFT_0121 at 118.041 kb on + strand, within B158DRAFT_0121 at 118.041 kb on + strand, within B158DRAFT_0121 at 118.041 kb on + strand, within B158DRAFT_0121 at 118.041 kb on + strand, within B158DRAFT_0121 at 118.041 kb on + strand, within B158DRAFT_0121 at 118.041 kb on + strand, within B158DRAFT_0121 at 118.041 kb on + strand, within B158DRAFT_0121 at 118.041 kb on + strand, within B158DRAFT_0121 at 118.041 kb on + strand, within B158DRAFT_0121 at 118.049 kb on - strand, within B158DRAFT_0121 at 118.049 kb on - strand, within B158DRAFT_0121 at 118.049 kb on - strand, within B158DRAFT_0121 at 118.049 kb on - strand, within B158DRAFT_0121 at 118.049 kb on - strand, within B158DRAFT_0121 at 118.049 kb on - strand, within B158DRAFT_0121 at 118.049 kb on - strand, within B158DRAFT_0121 at 118.049 kb on - strand, within B158DRAFT_0121 at 118.049 kb on - strand, within B158DRAFT_0121 at 118.049 kb on - strand, within B158DRAFT_0121 at 118.111 kb on + strand, within B158DRAFT_0121 at 118.160 kb on + strand, within B158DRAFT_0121 at 118.168 kb on - strand, within B158DRAFT_0121 at 118.177 kb on + strand, within B158DRAFT_0121 at 118.195 kb on - strand, within B158DRAFT_0121 at 118.195 kb on - strand, within B158DRAFT_0121 at 118.224 kb on + strand, within B158DRAFT_0121 at 118.224 kb on + strand, within B158DRAFT_0121 at 118.231 kb on - strand, within B158DRAFT_0121 at 118.232 kb on - strand, within B158DRAFT_0121 at 118.232 kb on - strand, within B158DRAFT_0121 at 118.312 kb on - strand, within B158DRAFT_0121 at 118.336 kb on + strand, within B158DRAFT_0121 at 118.423 kb on - strand, within B158DRAFT_0121 at 118.430 kb on + strand, within B158DRAFT_0121 at 118.430 kb on + strand, within B158DRAFT_0121 at 118.438 kb on - strand, within B158DRAFT_0121 at 118.438 kb on - strand, within B158DRAFT_0121 at 118.438 kb on - strand, within B158DRAFT_0121 at 118.535 kb on + strand, within B158DRAFT_0121 at 118.566 kb on + strand, within B158DRAFT_0121 at 118.599 kb on + strand, within B158DRAFT_0121 at 118.649 kb on - strand, within B158DRAFT_0121 at 118.649 kb on - strand, within B158DRAFT_0121 at 118.678 kb on + strand, within B158DRAFT_0121 at 118.678 kb on + strand, within B158DRAFT_0121 at 118.678 kb on + strand, within B158DRAFT_0121 at 118.678 kb on + strand, within B158DRAFT_0121 at 118.678 kb on + strand, within B158DRAFT_0121 at 118.678 kb on + strand, within B158DRAFT_0121 at 118.678 kb on + strand, within B158DRAFT_0121 at 118.686 kb on - strand, within B158DRAFT_0121 at 118.686 kb on - strand, within B158DRAFT_0121 at 118.686 kb on - strand, within B158DRAFT_0121
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 115,736 + B158DRAFT_0118 0.38 -2.8 115,736 + B158DRAFT_0118 0.38 -2.1 115,736 + B158DRAFT_0118 0.38 -3.2 115,749 + B158DRAFT_0118 0.40 -3.0 115,757 + B158DRAFT_0118 0.41 -2.0 115,758 - B158DRAFT_0118 0.41 -2.1 115,768 + B158DRAFT_0118 0.42 -3.2 115,824 - B158DRAFT_0118 0.51 -0.7 115,889 - B158DRAFT_0118 0.60 -1.6 115,905 + B158DRAFT_0118 0.62 -3.1 115,905 + B158DRAFT_0118 0.62 -2.6 115,905 + B158DRAFT_0118 0.62 -2.6 115,913 - B158DRAFT_0118 0.64 -0.7 115,913 - B158DRAFT_0118 0.64 -5.2 115,913 - B158DRAFT_0118 0.64 -1.3 115,913 - B158DRAFT_0118 0.64 -2.2 115,915 + B158DRAFT_0118 0.64 -2.8 115,954 - B158DRAFT_0118 0.70 +0.2 115,973 + B158DRAFT_0118 0.72 -3.0 115,978 + B158DRAFT_0118 0.73 -3.2 115,981 - B158DRAFT_0118 0.74 -3.1 115,981 - B158DRAFT_0118 0.74 -2.9 115,981 - B158DRAFT_0118 0.74 -3.1 116,031 - B158DRAFT_0118 0.81 -3.2 116,059 + B158DRAFT_0118 0.85 -4.9 116,067 - B158DRAFT_0118 0.86 -2.2 116,090 + B158DRAFT_0118 0.90 -2.9 116,098 + -3.1 116,119 - -2.2 116,155 + -2.6 116,199 - +0.0 116,201 + -2.4 116,387 + B158DRAFT_0119 0.37 -2.0 116,434 - B158DRAFT_0119 0.47 -4.9 116,482 - B158DRAFT_0119 0.57 -3.7 116,549 + B158DRAFT_0119 0.70 -2.4 116,549 + B158DRAFT_0119 0.70 -3.1 116,557 - B158DRAFT_0119 0.72 -2.5 116,568 - B158DRAFT_0119 0.74 -2.5 116,587 + B158DRAFT_0119 0.78 -3.3 116,587 + B158DRAFT_0119 0.78 -3.4 116,616 + B158DRAFT_0119 0.84 -2.9 116,616 + B158DRAFT_0119 0.84 -4.2 116,639 + B158DRAFT_0119 0.89 -3.1 116,697 - -1.1 116,729 - -1.6 116,745 + -1.0 116,786 - -2.3 116,801 - B158DRAFT_0120 0.11 -2.8 116,832 + B158DRAFT_0120 0.14 -3.3 116,832 + B158DRAFT_0120 0.14 -3.1 116,892 - B158DRAFT_0120 0.19 -1.7 116,937 - B158DRAFT_0120 0.24 -2.2 116,944 + B158DRAFT_0120 0.24 -2.0 116,949 - B158DRAFT_0120 0.25 -2.1 117,011 - B158DRAFT_0120 0.31 -2.7 117,024 - B158DRAFT_0120 0.32 -4.1 117,026 + B158DRAFT_0120 0.32 -3.4 117,034 - B158DRAFT_0120 0.33 -2.6 117,082 + B158DRAFT_0120 0.38 -2.9 117,090 - B158DRAFT_0120 0.38 -3.7 117,090 - B158DRAFT_0120 0.38 -3.2 117,092 + B158DRAFT_0120 0.39 -2.3 117,112 + B158DRAFT_0120 0.40 -2.8 117,189 + B158DRAFT_0120 0.48 -2.8 117,258 + B158DRAFT_0120 0.54 -2.3 117,259 - B158DRAFT_0120 0.55 -3.8 117,259 - B158DRAFT_0120 0.55 -2.8 117,259 - B158DRAFT_0120 0.55 -1.8 117,362 - B158DRAFT_0120 0.64 -2.5 117,383 + B158DRAFT_0120 0.66 -2.5 117,385 + B158DRAFT_0120 0.67 -3.4 117,385 + B158DRAFT_0120 0.67 -2.2 117,400 + B158DRAFT_0120 0.68 -3.5 117,400 + B158DRAFT_0120 0.68 -3.2 117,408 - B158DRAFT_0120 0.69 -2.1 117,435 + B158DRAFT_0120 0.71 -3.0 117,549 + B158DRAFT_0120 0.82 -2.5 117,556 + B158DRAFT_0120 0.83 -3.0 117,556 + B158DRAFT_0120 0.83 -3.7 117,556 + B158DRAFT_0120 0.83 -1.5 117,564 - B158DRAFT_0120 0.84 -3.5 117,571 - B158DRAFT_0120 0.85 -3.2 117,574 + B158DRAFT_0120 0.85 -2.7 117,581 + B158DRAFT_0120 0.85 -2.7 117,588 - B158DRAFT_0120 0.86 -2.5 117,646 + -1.7 117,646 + -2.1 117,654 - -3.1 117,654 - -2.5 117,654 - -3.2 117,654 - -2.8 117,654 - -3.0 117,766 + -3.3 117,766 + -3.6 117,776 + -3.3 117,784 - -0.9 117,832 + -2.6 117,840 - -2.5 117,840 - -2.7 117,865 + -2.5 117,865 + -3.0 117,865 + -2.6 117,865 + -1.8 117,870 + -3.3 117,873 - -1.5 117,923 - -2.2 118,041 + B158DRAFT_0121 0.14 -3.3 118,041 + B158DRAFT_0121 0.14 -3.6 118,041 + B158DRAFT_0121 0.14 -2.6 118,041 + B158DRAFT_0121 0.14 -2.1 118,041 + B158DRAFT_0121 0.14 -3.2 118,041 + B158DRAFT_0121 0.14 -1.6 118,041 + B158DRAFT_0121 0.14 -2.9 118,041 + B158DRAFT_0121 0.14 -2.3 118,041 + B158DRAFT_0121 0.14 -3.0 118,041 + B158DRAFT_0121 0.14 -2.2 118,041 + B158DRAFT_0121 0.14 -3.2 118,049 - B158DRAFT_0121 0.14 -1.8 118,049 - B158DRAFT_0121 0.14 -1.7 118,049 - B158DRAFT_0121 0.14 -1.2 118,049 - B158DRAFT_0121 0.14 -2.1 118,049 - B158DRAFT_0121 0.14 -1.7 118,049 - B158DRAFT_0121 0.14 -1.7 118,049 - B158DRAFT_0121 0.14 -0.3 118,049 - B158DRAFT_0121 0.14 +0.2 118,049 - B158DRAFT_0121 0.14 -1.1 118,049 - B158DRAFT_0121 0.14 -3.0 118,111 + B158DRAFT_0121 0.17 -3.1 118,160 + B158DRAFT_0121 0.19 -2.6 118,168 - B158DRAFT_0121 0.19 -2.1 118,177 + B158DRAFT_0121 0.20 -2.2 118,195 - B158DRAFT_0121 0.21 -2.0 118,195 - B158DRAFT_0121 0.21 -2.6 118,224 + B158DRAFT_0121 0.22 -2.6 118,224 + B158DRAFT_0121 0.22 -3.0 118,231 - B158DRAFT_0121 0.22 -3.0 118,232 - B158DRAFT_0121 0.22 -0.4 118,232 - B158DRAFT_0121 0.22 -1.3 118,312 - B158DRAFT_0121 0.26 -2.1 118,336 + B158DRAFT_0121 0.27 -2.5 118,423 - B158DRAFT_0121 0.31 -1.0 118,430 + B158DRAFT_0121 0.31 -2.6 118,430 + B158DRAFT_0121 0.31 -1.5 118,438 - B158DRAFT_0121 0.32 -1.7 118,438 - B158DRAFT_0121 0.32 -1.1 118,438 - B158DRAFT_0121 0.32 -0.9 118,535 + B158DRAFT_0121 0.36 -5.6 118,566 + B158DRAFT_0121 0.37 -3.0 118,599 + B158DRAFT_0121 0.39 -2.2 118,649 - B158DRAFT_0121 0.41 -1.5 118,649 - B158DRAFT_0121 0.41 -1.9 118,678 + B158DRAFT_0121 0.42 -3.5 118,678 + B158DRAFT_0121 0.42 -3.3 118,678 + B158DRAFT_0121 0.42 -2.7 118,678 + B158DRAFT_0121 0.42 -4.2 118,678 + B158DRAFT_0121 0.42 -2.8 118,678 + B158DRAFT_0121 0.42 -3.2 118,678 + B158DRAFT_0121 0.42 -2.8 118,686 - B158DRAFT_0121 0.43 -1.9 118,686 - B158DRAFT_0121 0.43 -1.2 118,686 - B158DRAFT_0121 0.43 -1.7
Or see this region's nucleotide sequence