Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2538

Experiment: m.b. A22 0.0109375 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2536 and B158DRAFT_2537 are separated by 146 nucleotidesB158DRAFT_2537 and B158DRAFT_2538 are separated by 16 nucleotidesB158DRAFT_2538 and B158DRAFT_2539 are separated by 16 nucleotidesB158DRAFT_2539 and B158DRAFT_2540 are separated by 60 nucleotides B158DRAFT_2536: B158DRAFT_2536 - Uncharacterized protein involved in response to NO, at 727,446 to 728,645 _2536 B158DRAFT_2537: B158DRAFT_2537 - hypothetical protein, at 728,792 to 729,247 _2537 B158DRAFT_2538: B158DRAFT_2538 - hypothetical protein, at 729,264 to 730,010 _2538 B158DRAFT_2539: B158DRAFT_2539 - hypothetical protein, at 730,027 to 730,596 _2539 B158DRAFT_2540: B158DRAFT_2540 - hypothetical protein, at 730,657 to 731,133 _2540 Position (kb) 729 730 731Strain fitness (log2 ratio) -2 -1 0 1at 728.273 kb on + strand, within B158DRAFT_2536at 728.281 kb on - strand, within B158DRAFT_2536at 728.283 kb on + strand, within B158DRAFT_2536at 728.283 kb on + strand, within B158DRAFT_2536at 728.283 kb on + strand, within B158DRAFT_2536at 728.291 kb on - strand, within B158DRAFT_2536at 728.298 kb on - strand, within B158DRAFT_2536at 728.321 kb on - strand, within B158DRAFT_2536at 728.353 kb on - strand, within B158DRAFT_2536at 728.384 kb on - strand, within B158DRAFT_2536at 728.403 kb on + strand, within B158DRAFT_2536at 728.411 kb on - strand, within B158DRAFT_2536at 728.413 kb on + strand, within B158DRAFT_2536at 728.420 kb on + strand, within B158DRAFT_2536at 728.439 kb on + strand, within B158DRAFT_2536at 728.444 kb on + strand, within B158DRAFT_2536at 728.483 kb on - strand, within B158DRAFT_2536at 728.483 kb on - strand, within B158DRAFT_2536at 728.483 kb on - strand, within B158DRAFT_2536at 728.483 kb on - strand, within B158DRAFT_2536at 728.518 kb on + strand, within B158DRAFT_2536at 728.526 kb on - strandat 728.538 kb on - strandat 728.561 kb on + strandat 728.569 kb on - strandat 728.829 kb on - strandat 728.874 kb on - strand, within B158DRAFT_2537at 728.878 kb on - strand, within B158DRAFT_2537at 728.886 kb on + strand, within B158DRAFT_2537at 728.971 kb on + strand, within B158DRAFT_2537at 729.036 kb on + strand, within B158DRAFT_2537at 729.036 kb on + strand, within B158DRAFT_2537at 729.044 kb on - strand, within B158DRAFT_2537at 729.044 kb on - strand, within B158DRAFT_2537at 729.080 kb on + strand, within B158DRAFT_2537at 729.166 kb on + strand, within B158DRAFT_2537at 729.166 kb on + strand, within B158DRAFT_2537at 729.183 kb on + strand, within B158DRAFT_2537at 729.183 kb on + strand, within B158DRAFT_2537at 729.191 kb on + strand, within B158DRAFT_2537at 729.191 kb on - strand, within B158DRAFT_2537at 729.191 kb on - strand, within B158DRAFT_2537at 729.191 kb on - strand, within B158DRAFT_2537at 729.191 kb on - strand, within B158DRAFT_2537at 729.191 kb on - strand, within B158DRAFT_2537at 729.199 kb on - strand, within B158DRAFT_2537at 729.209 kb on - strandat 729.216 kb on + strandat 729.219 kb on - strandat 729.224 kb on - strandat 729.224 kb on - strandat 729.224 kb on - strandat 729.224 kb on - strandat 729.224 kb on - strandat 729.224 kb on - strandat 729.226 kb on + strandat 729.234 kb on - strandat 729.234 kb on - strandat 729.293 kb on - strandat 729.299 kb on - strandat 729.299 kb on - strandat 729.299 kb on - strandat 729.324 kb on - strandat 729.354 kb on + strand, within B158DRAFT_2538at 729.364 kb on + strand, within B158DRAFT_2538at 729.432 kb on + strand, within B158DRAFT_2538at 729.432 kb on + strand, within B158DRAFT_2538at 729.440 kb on - strand, within B158DRAFT_2538at 729.453 kb on - strand, within B158DRAFT_2538at 729.487 kb on - strand, within B158DRAFT_2538at 729.487 kb on - strand, within B158DRAFT_2538at 729.489 kb on + strand, within B158DRAFT_2538at 729.497 kb on - strand, within B158DRAFT_2538at 729.497 kb on - strand, within B158DRAFT_2538at 729.497 kb on - strand, within B158DRAFT_2538at 729.497 kb on - strand, within B158DRAFT_2538at 729.497 kb on - strand, within B158DRAFT_2538at 729.524 kb on + strand, within B158DRAFT_2538at 729.532 kb on - strand, within B158DRAFT_2538at 729.570 kb on + strand, within B158DRAFT_2538at 729.578 kb on - strand, within B158DRAFT_2538at 729.632 kb on - strand, within B158DRAFT_2538at 729.652 kb on + strand, within B158DRAFT_2538at 729.652 kb on + strand, within B158DRAFT_2538at 729.652 kb on + strand, within B158DRAFT_2538at 729.652 kb on + strand, within B158DRAFT_2538at 729.652 kb on + strand, within B158DRAFT_2538at 729.660 kb on - strand, within B158DRAFT_2538at 729.677 kb on - strand, within B158DRAFT_2538at 729.713 kb on + strand, within B158DRAFT_2538at 729.735 kb on - strand, within B158DRAFT_2538at 729.735 kb on - strand, within B158DRAFT_2538at 729.785 kb on - strand, within B158DRAFT_2538at 729.804 kb on + strand, within B158DRAFT_2538at 729.813 kb on + strand, within B158DRAFT_2538at 729.822 kb on - strand, within B158DRAFT_2538at 729.846 kb on + strand, within B158DRAFT_2538at 729.856 kb on + strand, within B158DRAFT_2538at 729.856 kb on + strand, within B158DRAFT_2538at 729.856 kb on + strand, within B158DRAFT_2538at 729.856 kb on + strand, within B158DRAFT_2538at 729.856 kb on + strand, within B158DRAFT_2538at 729.864 kb on - strand, within B158DRAFT_2538at 729.864 kb on - strand, within B158DRAFT_2538at 729.864 kb on - strand, within B158DRAFT_2538at 729.864 kb on - strand, within B158DRAFT_2538at 729.864 kb on - strand, within B158DRAFT_2538at 729.928 kb on + strand, within B158DRAFT_2538at 729.928 kb on + strand, within B158DRAFT_2538at 729.936 kb on - strandat 730.094 kb on + strand, within B158DRAFT_2539at 730.094 kb on + strand, within B158DRAFT_2539at 730.094 kb on + strand, within B158DRAFT_2539at 730.094 kb on + strand, within B158DRAFT_2539at 730.094 kb on + strand, within B158DRAFT_2539at 730.094 kb on + strand, within B158DRAFT_2539at 730.095 kb on + strand, within B158DRAFT_2539at 730.102 kb on - strand, within B158DRAFT_2539at 730.104 kb on + strand, within B158DRAFT_2539at 730.104 kb on + strand, within B158DRAFT_2539at 730.308 kb on + strand, within B158DRAFT_2539at 730.311 kb on - strand, within B158DRAFT_2539at 730.311 kb on - strand, within B158DRAFT_2539at 730.343 kb on + strand, within B158DRAFT_2539at 730.357 kb on + strand, within B158DRAFT_2539at 730.357 kb on + strand, within B158DRAFT_2539at 730.357 kb on + strand, within B158DRAFT_2539at 730.365 kb on - strand, within B158DRAFT_2539at 730.365 kb on - strand, within B158DRAFT_2539at 730.367 kb on + strand, within B158DRAFT_2539at 730.377 kb on - strand, within B158DRAFT_2539at 730.377 kb on - strand, within B158DRAFT_2539at 730.398 kb on + strand, within B158DRAFT_2539at 730.442 kb on - strand, within B158DRAFT_2539at 730.442 kb on - strand, within B158DRAFT_2539at 730.515 kb on + strand, within B158DRAFT_2539at 730.541 kb on + strandat 730.555 kb on + strandat 730.719 kb on + strand, within B158DRAFT_2540at 730.719 kb on + strand, within B158DRAFT_2540at 730.727 kb on - strand, within B158DRAFT_2540at 730.898 kb on + strand, within B158DRAFT_2540at 730.914 kb on - strand, within B158DRAFT_2540at 730.939 kb on + strand, within B158DRAFT_2540

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. A22 0.0109375 mg/ml
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728,273 + B158DRAFT_2536 0.69 +0.0
728,281 - B158DRAFT_2536 0.70 +0.1
728,283 + B158DRAFT_2536 0.70 +0.5
728,283 + B158DRAFT_2536 0.70 +0.4
728,283 + B158DRAFT_2536 0.70 +0.4
728,291 - B158DRAFT_2536 0.70 +0.3
728,298 - B158DRAFT_2536 0.71 +0.4
728,321 - B158DRAFT_2536 0.73 -0.0
728,353 - B158DRAFT_2536 0.76 +0.3
728,384 - B158DRAFT_2536 0.78 -0.4
728,403 + B158DRAFT_2536 0.80 -0.2
728,411 - B158DRAFT_2536 0.80 -0.7
728,413 + B158DRAFT_2536 0.81 -0.2
728,420 + B158DRAFT_2536 0.81 +0.5
728,439 + B158DRAFT_2536 0.83 -0.1
728,444 + B158DRAFT_2536 0.83 -1.2
728,483 - B158DRAFT_2536 0.86 -0.7
728,483 - B158DRAFT_2536 0.86 +0.5
728,483 - B158DRAFT_2536 0.86 -1.3
728,483 - B158DRAFT_2536 0.86 +0.1
728,518 + B158DRAFT_2536 0.89 -0.7
728,526 - -0.1
728,538 - -0.5
728,561 + -0.0
728,569 - +0.5
728,829 - -1.3
728,874 - B158DRAFT_2537 0.18 -0.9
728,878 - B158DRAFT_2537 0.19 -0.1
728,886 + B158DRAFT_2537 0.21 +0.7
728,971 + B158DRAFT_2537 0.39 +0.8
729,036 + B158DRAFT_2537 0.54 -0.3
729,036 + B158DRAFT_2537 0.54 +0.5
729,044 - B158DRAFT_2537 0.55 +0.8
729,044 - B158DRAFT_2537 0.55 +0.1
729,080 + B158DRAFT_2537 0.63 +0.2
729,166 + B158DRAFT_2537 0.82 +0.4
729,166 + B158DRAFT_2537 0.82 +0.1
729,183 + B158DRAFT_2537 0.86 -0.4
729,183 + B158DRAFT_2537 0.86 -0.0
729,191 + B158DRAFT_2537 0.88 -0.2
729,191 - B158DRAFT_2537 0.88 +0.7
729,191 - B158DRAFT_2537 0.88 +0.8
729,191 - B158DRAFT_2537 0.88 +0.5
729,191 - B158DRAFT_2537 0.88 +0.3
729,191 - B158DRAFT_2537 0.88 +0.5
729,199 - B158DRAFT_2537 0.89 +0.4
729,209 - +0.3
729,216 + -0.0
729,219 - -0.1
729,224 - +0.1
729,224 - -0.1
729,224 - +0.2
729,224 - -0.1
729,224 - +0.3
729,224 - -0.0
729,226 + -0.1
729,234 - +0.4
729,234 - +0.1
729,293 - +0.1
729,299 - -0.6
729,299 - +0.6
729,299 - -0.2
729,324 - +0.2
729,354 + B158DRAFT_2538 0.12 +0.4
729,364 + B158DRAFT_2538 0.13 +0.1
729,432 + B158DRAFT_2538 0.22 +0.9
729,432 + B158DRAFT_2538 0.22 -0.1
729,440 - B158DRAFT_2538 0.24 -0.9
729,453 - B158DRAFT_2538 0.25 -0.5
729,487 - B158DRAFT_2538 0.30 -1.5
729,487 - B158DRAFT_2538 0.30 -2.0
729,489 + B158DRAFT_2538 0.30 +0.0
729,497 - B158DRAFT_2538 0.31 +0.1
729,497 - B158DRAFT_2538 0.31 -0.2
729,497 - B158DRAFT_2538 0.31 -0.2
729,497 - B158DRAFT_2538 0.31 -1.3
729,497 - B158DRAFT_2538 0.31 +0.1
729,524 + B158DRAFT_2538 0.35 -0.0
729,532 - B158DRAFT_2538 0.36 -0.8
729,570 + B158DRAFT_2538 0.41 -0.8
729,578 - B158DRAFT_2538 0.42 -0.4
729,632 - B158DRAFT_2538 0.49 -0.0
729,652 + B158DRAFT_2538 0.52 -0.7
729,652 + B158DRAFT_2538 0.52 -0.5
729,652 + B158DRAFT_2538 0.52 -0.9
729,652 + B158DRAFT_2538 0.52 +0.3
729,652 + B158DRAFT_2538 0.52 -0.7
729,660 - B158DRAFT_2538 0.53 -0.2
729,677 - B158DRAFT_2538 0.55 -0.4
729,713 + B158DRAFT_2538 0.60 -0.5
729,735 - B158DRAFT_2538 0.63 +0.2
729,735 - B158DRAFT_2538 0.63 -0.3
729,785 - B158DRAFT_2538 0.70 -0.4
729,804 + B158DRAFT_2538 0.72 -0.5
729,813 + B158DRAFT_2538 0.73 -0.0
729,822 - B158DRAFT_2538 0.75 +0.9
729,846 + B158DRAFT_2538 0.78 -0.1
729,856 + B158DRAFT_2538 0.79 -0.4
729,856 + B158DRAFT_2538 0.79 -0.2
729,856 + B158DRAFT_2538 0.79 -0.7
729,856 + B158DRAFT_2538 0.79 -0.0
729,856 + B158DRAFT_2538 0.79 -0.7
729,864 - B158DRAFT_2538 0.80 +1.2
729,864 - B158DRAFT_2538 0.80 +0.0
729,864 - B158DRAFT_2538 0.80 +0.3
729,864 - B158DRAFT_2538 0.80 +0.5
729,864 - B158DRAFT_2538 0.80 -0.5
729,928 + B158DRAFT_2538 0.89 +0.8
729,928 + B158DRAFT_2538 0.89 +0.3
729,936 - +0.1
730,094 + B158DRAFT_2539 0.12 -0.4
730,094 + B158DRAFT_2539 0.12 +0.9
730,094 + B158DRAFT_2539 0.12 +0.2
730,094 + B158DRAFT_2539 0.12 -0.3
730,094 + B158DRAFT_2539 0.12 +0.1
730,094 + B158DRAFT_2539 0.12 +0.8
730,095 + B158DRAFT_2539 0.12 -0.2
730,102 - B158DRAFT_2539 0.13 +0.2
730,104 + B158DRAFT_2539 0.14 -0.2
730,104 + B158DRAFT_2539 0.14 -1.3
730,308 + B158DRAFT_2539 0.49 -0.4
730,311 - B158DRAFT_2539 0.50 +0.1
730,311 - B158DRAFT_2539 0.50 +0.1
730,343 + B158DRAFT_2539 0.55 -0.0
730,357 + B158DRAFT_2539 0.58 -0.5
730,357 + B158DRAFT_2539 0.58 +0.5
730,357 + B158DRAFT_2539 0.58 +0.4
730,365 - B158DRAFT_2539 0.59 +0.3
730,365 - B158DRAFT_2539 0.59 -0.7
730,367 + B158DRAFT_2539 0.60 -2.5
730,377 - B158DRAFT_2539 0.61 -0.3
730,377 - B158DRAFT_2539 0.61 +0.1
730,398 + B158DRAFT_2539 0.65 +0.2
730,442 - B158DRAFT_2539 0.73 +0.1
730,442 - B158DRAFT_2539 0.73 +0.1
730,515 + B158DRAFT_2539 0.86 +0.4
730,541 + -0.4
730,555 + -0.5
730,719 + B158DRAFT_2540 0.13 -0.3
730,719 + B158DRAFT_2540 0.13 -0.0
730,727 - B158DRAFT_2540 0.15 +0.1
730,898 + B158DRAFT_2540 0.51 -0.4
730,914 - B158DRAFT_2540 0.54 +0.2
730,939 + B158DRAFT_2540 0.59 -0.2

Or see this region's nucleotide sequence