Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2493

Experiment: m.b. A22 0.0109375 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2492 and B158DRAFT_2493 are separated by 9 nucleotidesB158DRAFT_2493 and B158DRAFT_2494 are separated by 119 nucleotidesB158DRAFT_2494 and B158DRAFT_2495 are separated by 91 nucleotides B158DRAFT_2492: B158DRAFT_2492 - Rad3-related DNA helicases, at 673,627 to 675,588 _2492 B158DRAFT_2493: B158DRAFT_2493 - universal bacterial protein YeaZ, at 675,598 to 676,305 _2493 B158DRAFT_2494: B158DRAFT_2494 - outer membrane lipoprotein, Slp family, at 676,425 to 677,153 _2494 B158DRAFT_2495: B158DRAFT_2495 - putative efflux protein, MATE family, at 677,245 to 678,648 _2495 Position (kb) 675 676 677Strain fitness (log2 ratio) -3 -2 -1 0 1at 674.602 kb on + strand, within B158DRAFT_2492at 674.605 kb on + strand, within B158DRAFT_2492at 674.605 kb on + strand, within B158DRAFT_2492at 674.608 kb on - strand, within B158DRAFT_2492at 674.610 kb on - strand, within B158DRAFT_2492at 674.610 kb on - strand, within B158DRAFT_2492at 674.612 kb on + strand, within B158DRAFT_2492at 674.613 kb on - strand, within B158DRAFT_2492at 674.613 kb on - strand, within B158DRAFT_2492at 674.637 kb on + strand, within B158DRAFT_2492at 674.637 kb on + strand, within B158DRAFT_2492at 674.644 kb on + strand, within B158DRAFT_2492at 674.645 kb on - strand, within B158DRAFT_2492at 674.718 kb on + strand, within B158DRAFT_2492at 674.733 kb on - strand, within B158DRAFT_2492at 674.733 kb on - strand, within B158DRAFT_2492at 674.746 kb on - strand, within B158DRAFT_2492at 674.754 kb on + strand, within B158DRAFT_2492at 674.764 kb on + strand, within B158DRAFT_2492at 674.766 kb on + strand, within B158DRAFT_2492at 674.766 kb on + strand, within B158DRAFT_2492at 674.772 kb on - strand, within B158DRAFT_2492at 674.774 kb on - strand, within B158DRAFT_2492at 674.784 kb on - strand, within B158DRAFT_2492at 674.787 kb on + strand, within B158DRAFT_2492at 674.805 kb on + strand, within B158DRAFT_2492at 674.805 kb on + strand, within B158DRAFT_2492at 674.852 kb on + strand, within B158DRAFT_2492at 674.865 kb on - strand, within B158DRAFT_2492at 674.865 kb on - strand, within B158DRAFT_2492at 674.906 kb on + strand, within B158DRAFT_2492at 674.912 kb on + strand, within B158DRAFT_2492at 674.912 kb on + strand, within B158DRAFT_2492at 674.912 kb on + strand, within B158DRAFT_2492at 674.920 kb on - strand, within B158DRAFT_2492at 674.920 kb on - strand, within B158DRAFT_2492at 674.920 kb on - strand, within B158DRAFT_2492at 674.920 kb on - strand, within B158DRAFT_2492at 674.920 kb on - strand, within B158DRAFT_2492at 674.920 kb on - strand, within B158DRAFT_2492at 674.922 kb on + strand, within B158DRAFT_2492at 674.930 kb on - strand, within B158DRAFT_2492at 674.930 kb on - strand, within B158DRAFT_2492at 674.948 kb on - strand, within B158DRAFT_2492at 674.975 kb on - strand, within B158DRAFT_2492at 674.975 kb on - strand, within B158DRAFT_2492at 675.036 kb on + strand, within B158DRAFT_2492at 675.103 kb on - strand, within B158DRAFT_2492at 675.120 kb on - strand, within B158DRAFT_2492at 675.141 kb on + strand, within B158DRAFT_2492at 675.149 kb on - strand, within B158DRAFT_2492at 675.151 kb on + strand, within B158DRAFT_2492at 675.207 kb on + strand, within B158DRAFT_2492at 675.215 kb on - strand, within B158DRAFT_2492at 675.230 kb on + strand, within B158DRAFT_2492at 675.344 kb on - strand, within B158DRAFT_2492at 675.350 kb on - strand, within B158DRAFT_2492at 675.404 kb on + strandat 675.419 kb on - strandat 675.489 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.290 kb on + strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.298 kb on - strandat 676.491 kb on - strandat 676.578 kb on - strand, within B158DRAFT_2494at 676.601 kb on - strand, within B158DRAFT_2494at 676.650 kb on + strand, within B158DRAFT_2494at 676.658 kb on - strand, within B158DRAFT_2494at 676.659 kb on + strand, within B158DRAFT_2494at 676.674 kb on + strand, within B158DRAFT_2494at 676.851 kb on - strand, within B158DRAFT_2494at 676.863 kb on + strand, within B158DRAFT_2494at 676.871 kb on - strand, within B158DRAFT_2494at 676.894 kb on - strand, within B158DRAFT_2494at 676.919 kb on + strand, within B158DRAFT_2494at 676.987 kb on + strand, within B158DRAFT_2494at 677.014 kb on - strand, within B158DRAFT_2494at 677.035 kb on + strand, within B158DRAFT_2494at 677.043 kb on - strand, within B158DRAFT_2494at 677.043 kb on - strand, within B158DRAFT_2494at 677.043 kb on - strand, within B158DRAFT_2494at 677.043 kb on - strand, within B158DRAFT_2494at 677.043 kb on - strand, within B158DRAFT_2494at 677.043 kb on - strand, within B158DRAFT_2494at 677.048 kb on - strand, within B158DRAFT_2494at 677.050 kb on + strand, within B158DRAFT_2494at 677.050 kb on + strand, within B158DRAFT_2494at 677.050 kb on + strand, within B158DRAFT_2494at 677.050 kb on + strand, within B158DRAFT_2494at 677.050 kb on + strand, within B158DRAFT_2494at 677.058 kb on - strand, within B158DRAFT_2494at 677.058 kb on - strand, within B158DRAFT_2494at 677.058 kb on - strand, within B158DRAFT_2494at 677.063 kb on + strand, within B158DRAFT_2494at 677.068 kb on + strand, within B158DRAFT_2494at 677.071 kb on - strand, within B158DRAFT_2494at 677.071 kb on - strand, within B158DRAFT_2494at 677.071 kb on - strand, within B158DRAFT_2494at 677.071 kb on - strand, within B158DRAFT_2494at 677.080 kb on + strand, within B158DRAFT_2494at 677.086 kb on + strandat 677.086 kb on + strandat 677.086 kb on + strandat 677.086 kb on + strandat 677.094 kb on - strandat 677.094 kb on - strandat 677.094 kb on - strandat 677.094 kb on - strandat 677.094 kb on - strandat 677.114 kb on - strandat 677.160 kb on + strandat 677.173 kb on + strandat 677.231 kb on - strandat 677.275 kb on + strandat 677.278 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. A22 0.0109375 mg/ml
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674,602 + B158DRAFT_2492 0.50 -0.1
674,605 + B158DRAFT_2492 0.50 -0.0
674,605 + B158DRAFT_2492 0.50 +0.2
674,608 - B158DRAFT_2492 0.50 -0.1
674,610 - B158DRAFT_2492 0.50 -1.5
674,610 - B158DRAFT_2492 0.50 -0.1
674,612 + B158DRAFT_2492 0.50 -0.2
674,613 - B158DRAFT_2492 0.50 +0.2
674,613 - B158DRAFT_2492 0.50 -0.3
674,637 + B158DRAFT_2492 0.51 +0.7
674,637 + B158DRAFT_2492 0.51 +0.4
674,644 + B158DRAFT_2492 0.52 +0.3
674,645 - B158DRAFT_2492 0.52 -0.2
674,718 + B158DRAFT_2492 0.56 -0.6
674,733 - B158DRAFT_2492 0.56 +0.2
674,733 - B158DRAFT_2492 0.56 +0.2
674,746 - B158DRAFT_2492 0.57 +0.4
674,754 + B158DRAFT_2492 0.57 +0.6
674,764 + B158DRAFT_2492 0.58 +0.4
674,766 + B158DRAFT_2492 0.58 -0.3
674,766 + B158DRAFT_2492 0.58 -0.2
674,772 - B158DRAFT_2492 0.58 -0.3
674,774 - B158DRAFT_2492 0.58 -0.1
674,784 - B158DRAFT_2492 0.59 -0.2
674,787 + B158DRAFT_2492 0.59 +0.8
674,805 + B158DRAFT_2492 0.60 +0.1
674,805 + B158DRAFT_2492 0.60 -0.1
674,852 + B158DRAFT_2492 0.62 +0.1
674,865 - B158DRAFT_2492 0.63 +0.6
674,865 - B158DRAFT_2492 0.63 -0.1
674,906 + B158DRAFT_2492 0.65 -0.4
674,912 + B158DRAFT_2492 0.65 +0.1
674,912 + B158DRAFT_2492 0.65 -0.1
674,912 + B158DRAFT_2492 0.65 -0.4
674,920 - B158DRAFT_2492 0.66 -0.2
674,920 - B158DRAFT_2492 0.66 +0.4
674,920 - B158DRAFT_2492 0.66 +0.3
674,920 - B158DRAFT_2492 0.66 -0.1
674,920 - B158DRAFT_2492 0.66 -0.4
674,920 - B158DRAFT_2492 0.66 -0.6
674,922 + B158DRAFT_2492 0.66 -0.2
674,930 - B158DRAFT_2492 0.66 +0.3
674,930 - B158DRAFT_2492 0.66 -0.2
674,948 - B158DRAFT_2492 0.67 +0.2
674,975 - B158DRAFT_2492 0.69 -0.1
674,975 - B158DRAFT_2492 0.69 +0.4
675,036 + B158DRAFT_2492 0.72 -0.3
675,103 - B158DRAFT_2492 0.75 +0.2
675,120 - B158DRAFT_2492 0.76 -0.2
675,141 + B158DRAFT_2492 0.77 -0.4
675,149 - B158DRAFT_2492 0.78 +0.3
675,151 + B158DRAFT_2492 0.78 -0.0
675,207 + B158DRAFT_2492 0.81 +0.5
675,215 - B158DRAFT_2492 0.81 -0.1
675,230 + B158DRAFT_2492 0.82 -0.3
675,344 - B158DRAFT_2492 0.88 +0.6
675,350 - B158DRAFT_2492 0.88 +0.4
675,404 + +0.3
675,419 - +0.0
675,489 + -0.3
676,290 + +0.1
676,290 + +0.1
676,290 + +0.5
676,290 + -2.3
676,290 + +0.3
676,290 + +0.6
676,290 + -0.1
676,290 + -0.5
676,290 + -0.3
676,290 + +0.5
676,290 + +0.0
676,290 + -0.8
676,290 + +0.5
676,290 + +0.4
676,290 + +0.1
676,290 + +0.3
676,290 + +1.4
676,290 + +0.4
676,290 + +0.4
676,290 + +0.3
676,290 + -0.7
676,298 - -0.7
676,298 - -0.2
676,298 - +0.5
676,298 - -0.5
676,298 - -0.5
676,298 - +0.3
676,298 - +0.3
676,298 - +0.3
676,298 - -0.3
676,298 - +0.5
676,298 - -0.3
676,298 - -0.1
676,298 - -1.1
676,298 - -0.0
676,298 - +0.1
676,298 - -0.4
676,298 - -0.5
676,298 - -0.3
676,298 - -0.4
676,298 - -0.7
676,298 - -0.1
676,298 - -1.5
676,298 - +0.4
676,298 - +0.1
676,491 - -0.6
676,578 - B158DRAFT_2494 0.21 +0.5
676,601 - B158DRAFT_2494 0.24 -0.7
676,650 + B158DRAFT_2494 0.31 -0.0
676,658 - B158DRAFT_2494 0.32 +0.2
676,659 + B158DRAFT_2494 0.32 -0.5
676,674 + B158DRAFT_2494 0.34 +0.1
676,851 - B158DRAFT_2494 0.58 +0.2
676,863 + B158DRAFT_2494 0.60 -1.0
676,871 - B158DRAFT_2494 0.61 +0.6
676,894 - B158DRAFT_2494 0.64 +0.2
676,919 + B158DRAFT_2494 0.68 +0.8
676,987 + B158DRAFT_2494 0.77 +0.2
677,014 - B158DRAFT_2494 0.81 -0.6
677,035 + B158DRAFT_2494 0.84 +0.1
677,043 - B158DRAFT_2494 0.85 -0.2
677,043 - B158DRAFT_2494 0.85 -0.7
677,043 - B158DRAFT_2494 0.85 -0.2
677,043 - B158DRAFT_2494 0.85 +0.4
677,043 - B158DRAFT_2494 0.85 +0.4
677,043 - B158DRAFT_2494 0.85 +0.2
677,048 - B158DRAFT_2494 0.85 +0.5
677,050 + B158DRAFT_2494 0.86 -0.4
677,050 + B158DRAFT_2494 0.86 -0.1
677,050 + B158DRAFT_2494 0.86 -0.2
677,050 + B158DRAFT_2494 0.86 +0.7
677,050 + B158DRAFT_2494 0.86 -0.3
677,058 - B158DRAFT_2494 0.87 +0.5
677,058 - B158DRAFT_2494 0.87 -0.7
677,058 - B158DRAFT_2494 0.87 -0.2
677,063 + B158DRAFT_2494 0.88 +0.0
677,068 + B158DRAFT_2494 0.88 -0.8
677,071 - B158DRAFT_2494 0.89 +0.0
677,071 - B158DRAFT_2494 0.89 +0.8
677,071 - B158DRAFT_2494 0.89 -2.8
677,071 - B158DRAFT_2494 0.89 +0.5
677,080 + B158DRAFT_2494 0.90 -0.0
677,086 + -0.0
677,086 + -0.4
677,086 + +0.1
677,086 + -0.0
677,094 - +0.3
677,094 - +0.2
677,094 - +0.3
677,094 - +0.4
677,094 - -0.2
677,114 - -0.2
677,160 + -0.4
677,173 + -0.3
677,231 - -0.1
677,275 + -0.6
677,278 - -0.7

Or see this region's nucleotide sequence