Experiment: m.b. A22 0.0109375 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1585 and B158DRAFT_1586 are separated by 33 nucleotides B158DRAFT_1586 and B158DRAFT_1587 are separated by 75 nucleotides B158DRAFT_1587 and B158DRAFT_1588 are separated by 157 nucleotides
B158DRAFT_1585: B158DRAFT_1585 - Beta-glucosidase-related glycosidases, at 1,647,130 to 1,648,140
_1585
B158DRAFT_1586: B158DRAFT_1586 - Uncharacterized conserved small protein, at 1,648,174 to 1,648,530
_1586
B158DRAFT_1587: B158DRAFT_1587 - hypothetical protein, at 1,648,606 to 1,648,896
_1587
B158DRAFT_1588: B158DRAFT_1588 - lipoprotein releasing system, transmembrane protein, LolC/E family, at 1,649,054 to 1,650,298
_1588
Position (kb)
1648
1649 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1647.260 kb on + strand, within B158DRAFT_1585 at 1647.329 kb on - strand, within B158DRAFT_1585 at 1647.378 kb on + strand, within B158DRAFT_1585 at 1647.505 kb on - strand, within B158DRAFT_1585 at 1647.525 kb on + strand, within B158DRAFT_1585 at 1647.525 kb on + strand, within B158DRAFT_1585 at 1647.578 kb on + strand, within B158DRAFT_1585 at 1647.615 kb on + strand, within B158DRAFT_1585 at 1647.647 kb on + strand, within B158DRAFT_1585 at 1647.655 kb on - strand, within B158DRAFT_1585 at 1647.655 kb on - strand, within B158DRAFT_1585 at 1647.718 kb on + strand, within B158DRAFT_1585 at 1647.750 kb on - strand at 1647.772 kb on + strand, within B158DRAFT_1585 at 1647.772 kb on + strand, within B158DRAFT_1585 at 1647.780 kb on - strand, within B158DRAFT_1585 at 1647.857 kb on - strand, within B158DRAFT_1585 at 1647.896 kb on + strand, within B158DRAFT_1585 at 1647.896 kb on + strand, within B158DRAFT_1585 at 1647.904 kb on - strand, within B158DRAFT_1585 at 1647.922 kb on - strand, within B158DRAFT_1585 at 1647.922 kb on - strand, within B158DRAFT_1585 at 1647.966 kb on + strand, within B158DRAFT_1585 at 1647.978 kb on + strand, within B158DRAFT_1585 at 1647.986 kb on - strand, within B158DRAFT_1585 at 1647.986 kb on - strand, within B158DRAFT_1585 at 1648.026 kb on + strand, within B158DRAFT_1585 at 1648.034 kb on - strand, within B158DRAFT_1585 at 1648.066 kb on + strand at 1648.066 kb on + strand at 1648.066 kb on + strand at 1648.071 kb on + strand at 1648.074 kb on - strand at 1648.079 kb on - strand at 1648.090 kb on + strand at 1648.090 kb on + strand at 1648.090 kb on + strand at 1648.090 kb on + strand at 1648.097 kb on + strand at 1648.098 kb on - strand at 1648.098 kb on - strand at 1648.109 kb on + strand at 1648.109 kb on + strand at 1648.109 kb on + strand at 1648.166 kb on + strand at 1648.166 kb on + strand at 1648.166 kb on + strand at 1648.166 kb on + strand at 1648.172 kb on + strand at 1648.174 kb on - strand at 1648.174 kb on - strand at 1648.174 kb on - strand at 1648.174 kb on - strand at 1648.174 kb on - strand at 1648.190 kb on + strand at 1648.190 kb on + strand at 1648.198 kb on - strand at 1648.198 kb on - strand at 1648.198 kb on - strand at 1648.198 kb on - strand at 1648.198 kb on - strand at 1648.208 kb on - strand at 1648.244 kb on - strand, within B158DRAFT_1586 at 1648.282 kb on + strand, within B158DRAFT_1586 at 1648.290 kb on - strand, within B158DRAFT_1586 at 1648.300 kb on + strand, within B158DRAFT_1586 at 1648.300 kb on + strand, within B158DRAFT_1586 at 1648.349 kb on + strand, within B158DRAFT_1586 at 1648.349 kb on + strand, within B158DRAFT_1586 at 1648.357 kb on - strand, within B158DRAFT_1586 at 1648.357 kb on - strand, within B158DRAFT_1586 at 1648.359 kb on + strand, within B158DRAFT_1586 at 1648.416 kb on - strand, within B158DRAFT_1586 at 1648.487 kb on + strand, within B158DRAFT_1586 at 1648.487 kb on + strand, within B158DRAFT_1586 at 1648.490 kb on - strand, within B158DRAFT_1586 at 1648.495 kb on - strand at 1648.495 kb on - strand at 1648.593 kb on + strand at 1648.593 kb on + strand at 1648.593 kb on + strand at 1648.593 kb on + strand at 1648.593 kb on + strand at 1648.601 kb on - strand at 1648.603 kb on + strand at 1648.606 kb on - strand at 1648.662 kb on + strand, within B158DRAFT_1587 at 1648.705 kb on + strand, within B158DRAFT_1587 at 1648.705 kb on + strand, within B158DRAFT_1587 at 1648.705 kb on + strand, within B158DRAFT_1587 at 1648.705 kb on + strand, within B158DRAFT_1587 at 1648.705 kb on + strand, within B158DRAFT_1587 at 1648.705 kb on + strand, within B158DRAFT_1587 at 1648.713 kb on - strand, within B158DRAFT_1587 at 1648.713 kb on - strand, within B158DRAFT_1587 at 1648.713 kb on - strand, within B158DRAFT_1587 at 1648.713 kb on - strand, within B158DRAFT_1587 at 1648.771 kb on - strand, within B158DRAFT_1587 at 1648.873 kb on + strand at 1648.881 kb on - strand at 1648.882 kb on + strand at 1648.889 kb on + strand at 1648.889 kb on + strand at 1648.897 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.0109375 mg/ml remove 1,647,260 + B158DRAFT_1585 0.13 -2.4 1,647,329 - B158DRAFT_1585 0.20 -0.1 1,647,378 + B158DRAFT_1585 0.25 -1.9 1,647,505 - B158DRAFT_1585 0.37 -2.8 1,647,525 + B158DRAFT_1585 0.39 -2.6 1,647,525 + B158DRAFT_1585 0.39 -0.3 1,647,578 + B158DRAFT_1585 0.44 -3.4 1,647,615 + B158DRAFT_1585 0.48 -1.0 1,647,647 + B158DRAFT_1585 0.51 -2.5 1,647,655 - B158DRAFT_1585 0.52 -3.4 1,647,655 - B158DRAFT_1585 0.52 -2.2 1,647,718 + B158DRAFT_1585 0.58 -3.6 1,647,750 - -0.7 1,647,772 + B158DRAFT_1585 0.64 -2.5 1,647,772 + B158DRAFT_1585 0.64 -0.5 1,647,780 - B158DRAFT_1585 0.64 -1.0 1,647,857 - B158DRAFT_1585 0.72 -1.7 1,647,896 + B158DRAFT_1585 0.76 -3.1 1,647,896 + B158DRAFT_1585 0.76 -2.3 1,647,904 - B158DRAFT_1585 0.77 -3.4 1,647,922 - B158DRAFT_1585 0.78 -2.8 1,647,922 - B158DRAFT_1585 0.78 -1.0 1,647,966 + B158DRAFT_1585 0.83 -1.9 1,647,978 + B158DRAFT_1585 0.84 -2.2 1,647,986 - B158DRAFT_1585 0.85 -3.4 1,647,986 - B158DRAFT_1585 0.85 -2.6 1,648,026 + B158DRAFT_1585 0.89 -1.4 1,648,034 - B158DRAFT_1585 0.89 -0.3 1,648,066 + -3.5 1,648,066 + -1.8 1,648,066 + -1.5 1,648,071 + -1.8 1,648,074 - -0.0 1,648,079 - -2.9 1,648,090 + -3.1 1,648,090 + -0.7 1,648,090 + -3.2 1,648,090 + +0.3 1,648,097 + -0.8 1,648,098 - -3.7 1,648,098 - -2.5 1,648,109 + -0.6 1,648,109 + -0.9 1,648,109 + -1.4 1,648,166 + -0.6 1,648,166 + -1.2 1,648,166 + +0.0 1,648,166 + +0.4 1,648,172 + -0.5 1,648,174 - +1.0 1,648,174 - -0.4 1,648,174 - -0.1 1,648,174 - -0.1 1,648,174 - +0.1 1,648,190 + +0.3 1,648,190 + -0.6 1,648,198 - -0.2 1,648,198 - -0.1 1,648,198 - -1.2 1,648,198 - +0.3 1,648,198 - -0.5 1,648,208 - +0.1 1,648,244 - B158DRAFT_1586 0.20 -0.3 1,648,282 + B158DRAFT_1586 0.30 +0.3 1,648,290 - B158DRAFT_1586 0.32 -0.3 1,648,300 + B158DRAFT_1586 0.35 +0.0 1,648,300 + B158DRAFT_1586 0.35 -0.4 1,648,349 + B158DRAFT_1586 0.49 +0.2 1,648,349 + B158DRAFT_1586 0.49 -0.3 1,648,357 - B158DRAFT_1586 0.51 -0.1 1,648,357 - B158DRAFT_1586 0.51 +0.3 1,648,359 + B158DRAFT_1586 0.52 -0.1 1,648,416 - B158DRAFT_1586 0.68 -0.8 1,648,487 + B158DRAFT_1586 0.88 -0.2 1,648,487 + B158DRAFT_1586 0.88 -0.0 1,648,490 - B158DRAFT_1586 0.89 -0.0 1,648,495 - -0.4 1,648,495 - -0.1 1,648,593 + -0.3 1,648,593 + +0.1 1,648,593 + -0.0 1,648,593 + +0.8 1,648,593 + -0.2 1,648,601 - -0.1 1,648,603 + -0.2 1,648,606 - -0.1 1,648,662 + B158DRAFT_1587 0.19 -0.6 1,648,705 + B158DRAFT_1587 0.34 -1.1 1,648,705 + B158DRAFT_1587 0.34 -0.4 1,648,705 + B158DRAFT_1587 0.34 -0.8 1,648,705 + B158DRAFT_1587 0.34 -0.8 1,648,705 + B158DRAFT_1587 0.34 -0.8 1,648,705 + B158DRAFT_1587 0.34 +0.3 1,648,713 - B158DRAFT_1587 0.37 -0.2 1,648,713 - B158DRAFT_1587 0.37 -0.1 1,648,713 - B158DRAFT_1587 0.37 -1.4 1,648,713 - B158DRAFT_1587 0.37 -1.0 1,648,771 - B158DRAFT_1587 0.57 -0.3 1,648,873 + -0.4 1,648,881 - -0.3 1,648,882 + +0.4 1,648,889 + -0.5 1,648,889 + -0.6 1,648,897 - +1.7
Or see this region's nucleotide sequence