Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1563

Experiment: m.b. A22 0.0109375 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1561 and B158DRAFT_1562 are separated by 50 nucleotidesB158DRAFT_1562 and B158DRAFT_1563 are separated by 105 nucleotidesB158DRAFT_1563 and B158DRAFT_1564 are separated by 77 nucleotides B158DRAFT_1561: B158DRAFT_1561 - Signal transduction histidine kinase, at 1,615,637 to 1,616,998 _1561 B158DRAFT_1562: B158DRAFT_1562 - hypothetical protein, at 1,617,049 to 1,617,771 _1562 B158DRAFT_1563: B158DRAFT_1563 - Nucleotidyltransferase/DNA polymerase involved in DNA repair, at 1,617,877 to 1,618,986 _1563 B158DRAFT_1564: B158DRAFT_1564 - amino acid carrier protein, at 1,619,064 to 1,620,749 _1564 Position (kb) 1617 1618 1619Strain fitness (log2 ratio) -2 -1 0 1 2at 1616.889 kb on + strandat 1616.890 kb on - strandat 1616.959 kb on + strandat 1616.959 kb on + strandat 1616.969 kb on + strandat 1616.969 kb on + strandat 1616.977 kb on - strandat 1617.006 kb on + strandat 1617.006 kb on + strandat 1617.006 kb on + strandat 1617.014 kb on - strandat 1617.014 kb on - strandat 1617.014 kb on - strandat 1617.018 kb on + strandat 1617.026 kb on - strandat 1617.178 kb on + strand, within B158DRAFT_1562at 1617.179 kb on + strand, within B158DRAFT_1562at 1617.194 kb on - strand, within B158DRAFT_1562at 1617.274 kb on - strand, within B158DRAFT_1562at 1617.323 kb on + strand, within B158DRAFT_1562at 1617.373 kb on - strand, within B158DRAFT_1562at 1617.422 kb on + strand, within B158DRAFT_1562at 1617.440 kb on + strand, within B158DRAFT_1562at 1617.556 kb on - strand, within B158DRAFT_1562at 1617.613 kb on - strand, within B158DRAFT_1562at 1617.633 kb on + strand, within B158DRAFT_1562at 1617.633 kb on + strand, within B158DRAFT_1562at 1617.641 kb on - strand, within B158DRAFT_1562at 1617.641 kb on - strand, within B158DRAFT_1562at 1617.651 kb on - strand, within B158DRAFT_1562at 1617.664 kb on + strand, within B158DRAFT_1562at 1617.677 kb on + strand, within B158DRAFT_1562at 1617.873 kb on + strandat 1617.881 kb on - strandat 1618.005 kb on - strand, within B158DRAFT_1563at 1618.020 kb on - strand, within B158DRAFT_1563at 1618.078 kb on + strand, within B158DRAFT_1563at 1618.078 kb on + strand, within B158DRAFT_1563at 1618.085 kb on - strand, within B158DRAFT_1563at 1618.098 kb on + strand, within B158DRAFT_1563at 1618.103 kb on + strand, within B158DRAFT_1563at 1618.103 kb on + strand, within B158DRAFT_1563at 1618.113 kb on + strand, within B158DRAFT_1563at 1618.113 kb on + strand, within B158DRAFT_1563at 1618.113 kb on + strand, within B158DRAFT_1563at 1618.113 kb on + strand, within B158DRAFT_1563at 1618.113 kb on + strand, within B158DRAFT_1563at 1618.121 kb on - strand, within B158DRAFT_1563at 1618.121 kb on - strand, within B158DRAFT_1563at 1618.121 kb on - strand, within B158DRAFT_1563at 1618.121 kb on - strand, within B158DRAFT_1563at 1618.122 kb on - strand, within B158DRAFT_1563at 1618.213 kb on + strand, within B158DRAFT_1563at 1618.213 kb on + strand, within B158DRAFT_1563at 1618.223 kb on + strand, within B158DRAFT_1563at 1618.223 kb on + strand, within B158DRAFT_1563at 1618.223 kb on + strand, within B158DRAFT_1563at 1618.231 kb on - strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.278 kb on + strand, within B158DRAFT_1563at 1618.286 kb on - strand, within B158DRAFT_1563at 1618.286 kb on - strand, within B158DRAFT_1563at 1618.286 kb on - strand, within B158DRAFT_1563at 1618.286 kb on - strand, within B158DRAFT_1563at 1618.286 kb on - strand, within B158DRAFT_1563at 1618.286 kb on - strand, within B158DRAFT_1563at 1618.286 kb on - strand, within B158DRAFT_1563at 1618.286 kb on - strand, within B158DRAFT_1563at 1618.286 kb on - strand, within B158DRAFT_1563at 1618.326 kb on - strand, within B158DRAFT_1563at 1618.336 kb on - strand, within B158DRAFT_1563at 1618.336 kb on - strand, within B158DRAFT_1563at 1618.378 kb on - strand, within B158DRAFT_1563at 1618.421 kb on + strand, within B158DRAFT_1563at 1618.503 kb on + strand, within B158DRAFT_1563at 1618.511 kb on - strand, within B158DRAFT_1563at 1618.520 kb on + strand, within B158DRAFT_1563at 1618.528 kb on - strand, within B158DRAFT_1563at 1618.537 kb on - strand, within B158DRAFT_1563at 1618.539 kb on + strand, within B158DRAFT_1563at 1618.629 kb on + strand, within B158DRAFT_1563at 1618.672 kb on + strand, within B158DRAFT_1563at 1618.672 kb on + strand, within B158DRAFT_1563at 1618.672 kb on + strand, within B158DRAFT_1563at 1618.672 kb on + strand, within B158DRAFT_1563at 1618.678 kb on - strand, within B158DRAFT_1563at 1618.678 kb on - strand, within B158DRAFT_1563at 1618.678 kb on - strand, within B158DRAFT_1563at 1618.678 kb on - strand, within B158DRAFT_1563at 1618.678 kb on - strand, within B158DRAFT_1563at 1618.678 kb on - strand, within B158DRAFT_1563at 1618.680 kb on + strand, within B158DRAFT_1563at 1618.680 kb on - strand, within B158DRAFT_1563at 1618.680 kb on - strand, within B158DRAFT_1563at 1618.680 kb on - strand, within B158DRAFT_1563at 1618.680 kb on - strand, within B158DRAFT_1563at 1618.682 kb on + strand, within B158DRAFT_1563at 1618.682 kb on + strand, within B158DRAFT_1563at 1618.690 kb on - strand, within B158DRAFT_1563at 1618.690 kb on - strand, within B158DRAFT_1563at 1618.690 kb on - strand, within B158DRAFT_1563at 1618.712 kb on + strand, within B158DRAFT_1563at 1618.712 kb on + strand, within B158DRAFT_1563at 1618.712 kb on + strand, within B158DRAFT_1563at 1618.712 kb on + strand, within B158DRAFT_1563at 1618.741 kb on - strand, within B158DRAFT_1563at 1618.781 kb on - strand, within B158DRAFT_1563at 1618.825 kb on - strand, within B158DRAFT_1563at 1618.898 kb on + strandat 1618.898 kb on + strandat 1618.898 kb on + strandat 1618.898 kb on + strandat 1618.919 kb on + strandat 1618.949 kb on + strandat 1619.016 kb on + strandat 1619.016 kb on + strandat 1619.096 kb on + strandat 1619.096 kb on + strandat 1619.102 kb on - strandat 1619.215 kb on + strandat 1619.361 kb on + strand, within B158DRAFT_1564at 1619.369 kb on - strand, within B158DRAFT_1564at 1619.385 kb on - strand, within B158DRAFT_1564at 1619.430 kb on + strand, within B158DRAFT_1564at 1619.512 kb on + strand, within B158DRAFT_1564at 1619.524 kb on + strand, within B158DRAFT_1564at 1619.524 kb on + strand, within B158DRAFT_1564at 1619.524 kb on + strand, within B158DRAFT_1564at 1619.532 kb on - strand, within B158DRAFT_1564at 1619.548 kb on + strand, within B158DRAFT_1564at 1619.569 kb on - strand, within B158DRAFT_1564at 1619.592 kb on - strand, within B158DRAFT_1564at 1619.594 kb on + strand, within B158DRAFT_1564at 1619.594 kb on + strand, within B158DRAFT_1564at 1619.603 kb on - strand, within B158DRAFT_1564at 1619.614 kb on + strand, within B158DRAFT_1564at 1619.640 kb on + strand, within B158DRAFT_1564at 1619.640 kb on + strand, within B158DRAFT_1564at 1619.647 kb on - strand, within B158DRAFT_1564at 1619.685 kb on - strand, within B158DRAFT_1564at 1619.729 kb on + strand, within B158DRAFT_1564at 1619.737 kb on - strand, within B158DRAFT_1564at 1619.737 kb on - strand, within B158DRAFT_1564at 1619.737 kb on - strand, within B158DRAFT_1564at 1619.829 kb on + strand, within B158DRAFT_1564at 1619.910 kb on + strand, within B158DRAFT_1564at 1619.910 kb on + strand, within B158DRAFT_1564at 1619.910 kb on + strand, within B158DRAFT_1564at 1619.910 kb on + strand, within B158DRAFT_1564at 1619.910 kb on + strand, within B158DRAFT_1564at 1619.910 kb on + strand, within B158DRAFT_1564at 1619.910 kb on + strand, within B158DRAFT_1564at 1619.910 kb on + strand, within B158DRAFT_1564at 1619.910 kb on + strand, within B158DRAFT_1564at 1619.910 kb on + strand, within B158DRAFT_1564at 1619.918 kb on - strand, within B158DRAFT_1564at 1619.918 kb on - strand, within B158DRAFT_1564at 1619.918 kb on - strand, within B158DRAFT_1564at 1619.918 kb on - strand, within B158DRAFT_1564at 1619.918 kb on - strand, within B158DRAFT_1564at 1619.918 kb on - strand, within B158DRAFT_1564at 1619.918 kb on - strand, within B158DRAFT_1564at 1619.918 kb on - strand, within B158DRAFT_1564at 1619.918 kb on - strand, within B158DRAFT_1564at 1619.918 kb on - strand, within B158DRAFT_1564at 1619.918 kb on - strand, within B158DRAFT_1564at 1619.923 kb on - strand, within B158DRAFT_1564at 1619.923 kb on - strand, within B158DRAFT_1564at 1619.962 kb on + strand, within B158DRAFT_1564at 1619.978 kb on - strand, within B158DRAFT_1564at 1619.978 kb on - strand, within B158DRAFT_1564

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. A22 0.0109375 mg/ml
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1,616,889 + -0.7
1,616,890 - -0.3
1,616,959 + -1.6
1,616,959 + -0.2
1,616,969 + -0.4
1,616,969 + +0.1
1,616,977 - -1.5
1,617,006 + -0.0
1,617,006 + -0.1
1,617,006 + -0.2
1,617,014 - -0.5
1,617,014 - -0.1
1,617,014 - -0.2
1,617,018 + -0.4
1,617,026 - +0.1
1,617,178 + B158DRAFT_1562 0.18 -0.4
1,617,179 + B158DRAFT_1562 0.18 -1.0
1,617,194 - B158DRAFT_1562 0.20 -0.4
1,617,274 - B158DRAFT_1562 0.31 -1.5
1,617,323 + B158DRAFT_1562 0.38 +0.1
1,617,373 - B158DRAFT_1562 0.45 -0.4
1,617,422 + B158DRAFT_1562 0.52 +0.2
1,617,440 + B158DRAFT_1562 0.54 -2.0
1,617,556 - B158DRAFT_1562 0.70 +0.0
1,617,613 - B158DRAFT_1562 0.78 -0.3
1,617,633 + B158DRAFT_1562 0.81 +0.4
1,617,633 + B158DRAFT_1562 0.81 -0.4
1,617,641 - B158DRAFT_1562 0.82 -0.9
1,617,641 - B158DRAFT_1562 0.82 -0.7
1,617,651 - B158DRAFT_1562 0.83 -0.4
1,617,664 + B158DRAFT_1562 0.85 +0.1
1,617,677 + B158DRAFT_1562 0.87 +0.2
1,617,873 + +0.1
1,617,881 - -0.0
1,618,005 - B158DRAFT_1563 0.12 +0.2
1,618,020 - B158DRAFT_1563 0.13 +0.3
1,618,078 + B158DRAFT_1563 0.18 -0.5
1,618,078 + B158DRAFT_1563 0.18 +0.1
1,618,085 - B158DRAFT_1563 0.19 +0.8
1,618,098 + B158DRAFT_1563 0.20 -0.6
1,618,103 + B158DRAFT_1563 0.20 -0.0
1,618,103 + B158DRAFT_1563 0.20 -0.4
1,618,113 + B158DRAFT_1563 0.21 +0.3
1,618,113 + B158DRAFT_1563 0.21 -0.0
1,618,113 + B158DRAFT_1563 0.21 -0.1
1,618,113 + B158DRAFT_1563 0.21 -0.0
1,618,113 + B158DRAFT_1563 0.21 -0.2
1,618,121 - B158DRAFT_1563 0.22 -0.9
1,618,121 - B158DRAFT_1563 0.22 +0.1
1,618,121 - B158DRAFT_1563 0.22 -0.4
1,618,121 - B158DRAFT_1563 0.22 -0.2
1,618,122 - B158DRAFT_1563 0.22 +0.6
1,618,213 + B158DRAFT_1563 0.30 -1.0
1,618,213 + B158DRAFT_1563 0.30 +0.1
1,618,223 + B158DRAFT_1563 0.31 -0.2
1,618,223 + B158DRAFT_1563 0.31 -0.2
1,618,223 + B158DRAFT_1563 0.31 +0.0
1,618,231 - B158DRAFT_1563 0.32 -0.3
1,618,278 + B158DRAFT_1563 0.36 -0.3
1,618,278 + B158DRAFT_1563 0.36 +0.4
1,618,278 + B158DRAFT_1563 0.36 -0.7
1,618,278 + B158DRAFT_1563 0.36 -0.7
1,618,278 + B158DRAFT_1563 0.36 +0.1
1,618,278 + B158DRAFT_1563 0.36 -0.2
1,618,278 + B158DRAFT_1563 0.36 -0.9
1,618,278 + B158DRAFT_1563 0.36 -0.0
1,618,278 + B158DRAFT_1563 0.36 +0.2
1,618,278 + B158DRAFT_1563 0.36 +0.3
1,618,278 + B158DRAFT_1563 0.36 +0.3
1,618,286 - B158DRAFT_1563 0.37 +0.2
1,618,286 - B158DRAFT_1563 0.37 +0.6
1,618,286 - B158DRAFT_1563 0.37 -0.4
1,618,286 - B158DRAFT_1563 0.37 -0.3
1,618,286 - B158DRAFT_1563 0.37 -0.3
1,618,286 - B158DRAFT_1563 0.37 -0.2
1,618,286 - B158DRAFT_1563 0.37 +0.4
1,618,286 - B158DRAFT_1563 0.37 +0.0
1,618,286 - B158DRAFT_1563 0.37 +0.3
1,618,326 - B158DRAFT_1563 0.40 +0.7
1,618,336 - B158DRAFT_1563 0.41 -0.2
1,618,336 - B158DRAFT_1563 0.41 -0.3
1,618,378 - B158DRAFT_1563 0.45 +0.1
1,618,421 + B158DRAFT_1563 0.49 +1.5
1,618,503 + B158DRAFT_1563 0.56 +0.5
1,618,511 - B158DRAFT_1563 0.57 +0.5
1,618,520 + B158DRAFT_1563 0.58 -0.1
1,618,528 - B158DRAFT_1563 0.59 -0.3
1,618,537 - B158DRAFT_1563 0.59 -0.0
1,618,539 + B158DRAFT_1563 0.60 +0.1
1,618,629 + B158DRAFT_1563 0.68 +0.4
1,618,672 + B158DRAFT_1563 0.72 -0.3
1,618,672 + B158DRAFT_1563 0.72 -0.0
1,618,672 + B158DRAFT_1563 0.72 +0.3
1,618,672 + B158DRAFT_1563 0.72 -0.1
1,618,678 - B158DRAFT_1563 0.72 -0.1
1,618,678 - B158DRAFT_1563 0.72 -0.0
1,618,678 - B158DRAFT_1563 0.72 +0.8
1,618,678 - B158DRAFT_1563 0.72 +0.3
1,618,678 - B158DRAFT_1563 0.72 +0.4
1,618,678 - B158DRAFT_1563 0.72 -0.7
1,618,680 + B158DRAFT_1563 0.72 -0.2
1,618,680 - B158DRAFT_1563 0.72 +0.2
1,618,680 - B158DRAFT_1563 0.72 -0.1
1,618,680 - B158DRAFT_1563 0.72 -2.2
1,618,680 - B158DRAFT_1563 0.72 +0.1
1,618,682 + B158DRAFT_1563 0.73 -0.2
1,618,682 + B158DRAFT_1563 0.73 -0.1
1,618,690 - B158DRAFT_1563 0.73 -0.5
1,618,690 - B158DRAFT_1563 0.73 +0.4
1,618,690 - B158DRAFT_1563 0.73 -0.1
1,618,712 + B158DRAFT_1563 0.75 +0.2
1,618,712 + B158DRAFT_1563 0.75 -1.8
1,618,712 + B158DRAFT_1563 0.75 -0.9
1,618,712 + B158DRAFT_1563 0.75 -0.2
1,618,741 - B158DRAFT_1563 0.78 +0.1
1,618,781 - B158DRAFT_1563 0.81 -0.1
1,618,825 - B158DRAFT_1563 0.85 +0.1
1,618,898 + +0.5
1,618,898 + -0.3
1,618,898 + +0.3
1,618,898 + +0.2
1,618,919 + +0.2
1,618,949 + -0.1
1,619,016 + +0.2
1,619,016 + +0.8
1,619,096 + -0.3
1,619,096 + +0.8
1,619,102 - +0.5
1,619,215 + +0.6
1,619,361 + B158DRAFT_1564 0.18 +0.7
1,619,369 - B158DRAFT_1564 0.18 +1.1
1,619,385 - B158DRAFT_1564 0.19 +0.9
1,619,430 + B158DRAFT_1564 0.22 +0.4
1,619,512 + B158DRAFT_1564 0.27 +0.8
1,619,524 + B158DRAFT_1564 0.27 +0.2
1,619,524 + B158DRAFT_1564 0.27 +0.5
1,619,524 + B158DRAFT_1564 0.27 +0.4
1,619,532 - B158DRAFT_1564 0.28 +0.2
1,619,548 + B158DRAFT_1564 0.29 +0.2
1,619,569 - B158DRAFT_1564 0.30 +0.5
1,619,592 - B158DRAFT_1564 0.31 +0.4
1,619,594 + B158DRAFT_1564 0.31 -0.1
1,619,594 + B158DRAFT_1564 0.31 +0.5
1,619,603 - B158DRAFT_1564 0.32 +1.0
1,619,614 + B158DRAFT_1564 0.33 +0.9
1,619,640 + B158DRAFT_1564 0.34 +0.7
1,619,640 + B158DRAFT_1564 0.34 +0.1
1,619,647 - B158DRAFT_1564 0.35 +0.4
1,619,685 - B158DRAFT_1564 0.37 +0.9
1,619,729 + B158DRAFT_1564 0.39 +0.3
1,619,737 - B158DRAFT_1564 0.40 +0.8
1,619,737 - B158DRAFT_1564 0.40 +0.4
1,619,737 - B158DRAFT_1564 0.40 +1.0
1,619,829 + B158DRAFT_1564 0.45 +0.1
1,619,910 + B158DRAFT_1564 0.50 -0.4
1,619,910 + B158DRAFT_1564 0.50 +0.2
1,619,910 + B158DRAFT_1564 0.50 +0.4
1,619,910 + B158DRAFT_1564 0.50 +2.0
1,619,910 + B158DRAFT_1564 0.50 +0.6
1,619,910 + B158DRAFT_1564 0.50 +0.2
1,619,910 + B158DRAFT_1564 0.50 +0.5
1,619,910 + B158DRAFT_1564 0.50 +0.3
1,619,910 + B158DRAFT_1564 0.50 +0.4
1,619,910 + B158DRAFT_1564 0.50 +0.3
1,619,918 - B158DRAFT_1564 0.51 -0.1
1,619,918 - B158DRAFT_1564 0.51 +1.7
1,619,918 - B158DRAFT_1564 0.51 +0.4
1,619,918 - B158DRAFT_1564 0.51 +0.9
1,619,918 - B158DRAFT_1564 0.51 +0.4
1,619,918 - B158DRAFT_1564 0.51 +0.7
1,619,918 - B158DRAFT_1564 0.51 +0.4
1,619,918 - B158DRAFT_1564 0.51 +0.1
1,619,918 - B158DRAFT_1564 0.51 +0.5
1,619,918 - B158DRAFT_1564 0.51 +0.0
1,619,918 - B158DRAFT_1564 0.51 +0.1
1,619,923 - B158DRAFT_1564 0.51 +0.8
1,619,923 - B158DRAFT_1564 0.51 +1.0
1,619,962 + B158DRAFT_1564 0.53 +1.6
1,619,978 - B158DRAFT_1564 0.54 +0.2
1,619,978 - B158DRAFT_1564 0.54 +0.1

Or see this region's nucleotide sequence