Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0139

Experiment: m.b. A22 0.0109375 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0137 and B158DRAFT_0138 are separated by 196 nucleotidesB158DRAFT_0138 and B158DRAFT_0139 overlap by 4 nucleotidesB158DRAFT_0139 and B158DRAFT_0140 are separated by 26 nucleotides B158DRAFT_0137: B158DRAFT_0137 - cytochrome c oxidase, subunit II, at 135,075 to 136,244 _0137 B158DRAFT_0138: B158DRAFT_0138 - hypothetical protein, at 136,441 to 137,190 _0138 B158DRAFT_0139: B158DRAFT_0139 - RNA polymerase sigma factor, sigma-70 family, at 137,187 to 137,876 _0139 B158DRAFT_0140: B158DRAFT_0140 - Uncharacterized protein containing a von Willebrand factor type A (vWA) domain, at 137,903 to 139,648 _0140 Position (kb) 137 138Strain fitness (log2 ratio) -3 -2 -1 0 1at 136.191 kb on + strandat 136.193 kb on - strandat 136.255 kb on + strandat 136.298 kb on + strandat 136.511 kb on + strandat 136.568 kb on + strand, within B158DRAFT_0138at 136.570 kb on - strand, within B158DRAFT_0138at 136.592 kb on + strand, within B158DRAFT_0138at 136.623 kb on - strand, within B158DRAFT_0138at 136.625 kb on + strand, within B158DRAFT_0138at 136.630 kb on + strand, within B158DRAFT_0138at 136.630 kb on + strand, within B158DRAFT_0138at 136.633 kb on - strand, within B158DRAFT_0138at 136.633 kb on - strand, within B158DRAFT_0138at 136.691 kb on + strand, within B158DRAFT_0138at 136.699 kb on - strand, within B158DRAFT_0138at 136.699 kb on - strand, within B158DRAFT_0138at 136.699 kb on - strand, within B158DRAFT_0138at 136.699 kb on - strand, within B158DRAFT_0138at 136.753 kb on + strand, within B158DRAFT_0138at 136.768 kb on + strand, within B158DRAFT_0138at 136.790 kb on - strand, within B158DRAFT_0138at 136.797 kb on - strand, within B158DRAFT_0138at 136.837 kb on + strand, within B158DRAFT_0138at 136.845 kb on - strand, within B158DRAFT_0138at 136.877 kb on - strand, within B158DRAFT_0138at 136.909 kb on + strand, within B158DRAFT_0138at 137.008 kb on - strand, within B158DRAFT_0138at 137.010 kb on + strand, within B158DRAFT_0138at 137.028 kb on + strand, within B158DRAFT_0138at 137.042 kb on - strand, within B158DRAFT_0138at 137.109 kb on + strand, within B158DRAFT_0138at 137.240 kb on + strandat 137.245 kb on - strandat 137.272 kb on + strand, within B158DRAFT_0139at 137.272 kb on + strand, within B158DRAFT_0139at 137.272 kb on + strand, within B158DRAFT_0139at 137.272 kb on + strand, within B158DRAFT_0139at 137.272 kb on + strand, within B158DRAFT_0139at 137.272 kb on + strand, within B158DRAFT_0139at 137.272 kb on + strand, within B158DRAFT_0139at 137.279 kb on + strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.298 kb on + strand, within B158DRAFT_0139at 137.351 kb on - strand, within B158DRAFT_0139at 137.482 kb on + strand, within B158DRAFT_0139at 137.482 kb on + strand, within B158DRAFT_0139at 137.482 kb on + strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.550 kb on - strand, within B158DRAFT_0139at 137.567 kb on - strand, within B158DRAFT_0139at 137.567 kb on - strand, within B158DRAFT_0139at 137.578 kb on + strand, within B158DRAFT_0139at 137.596 kb on - strand, within B158DRAFT_0139at 137.690 kb on + strand, within B158DRAFT_0139at 137.711 kb on - strand, within B158DRAFT_0139at 137.726 kb on + strand, within B158DRAFT_0139at 137.743 kb on - strand, within B158DRAFT_0139at 137.772 kb on - strand, within B158DRAFT_0139at 137.800 kb on + strand, within B158DRAFT_0139at 137.800 kb on + strand, within B158DRAFT_0139at 137.800 kb on + strand, within B158DRAFT_0139at 137.808 kb on - strandat 137.808 kb on - strandat 137.808 kb on - strandat 137.810 kb on + strandat 137.905 kb on + strandat 137.910 kb on + strandat 137.910 kb on + strandat 137.910 kb on + strandat 137.918 kb on - strandat 137.923 kb on - strandat 137.923 kb on - strandat 137.931 kb on + strandat 137.939 kb on - strandat 137.942 kb on - strandat 137.942 kb on - strandat 138.009 kb on + strandat 138.009 kb on + strandat 138.017 kb on + strandat 138.017 kb on - strandat 138.025 kb on - strandat 138.035 kb on + strandat 138.069 kb on - strandat 138.069 kb on - strandat 138.094 kb on + strand, within B158DRAFT_0140at 138.102 kb on - strand, within B158DRAFT_0140at 138.102 kb on - strand, within B158DRAFT_0140at 138.123 kb on - strand, within B158DRAFT_0140at 138.141 kb on + strand, within B158DRAFT_0140at 138.168 kb on - strand, within B158DRAFT_0140at 138.262 kb on + strand, within B158DRAFT_0140at 138.270 kb on + strand, within B158DRAFT_0140at 138.295 kb on + strand, within B158DRAFT_0140at 138.313 kb on - strand, within B158DRAFT_0140at 138.323 kb on - strand, within B158DRAFT_0140at 138.323 kb on - strand, within B158DRAFT_0140at 138.333 kb on - strand, within B158DRAFT_0140at 138.368 kb on - strand, within B158DRAFT_0140at 138.566 kb on - strand, within B158DRAFT_0140at 138.571 kb on - strand, within B158DRAFT_0140at 138.602 kb on - strand, within B158DRAFT_0140at 138.633 kb on - strand, within B158DRAFT_0140at 138.741 kb on + strand, within B158DRAFT_0140at 138.747 kb on + strand, within B158DRAFT_0140at 138.747 kb on + strand, within B158DRAFT_0140at 138.749 kb on - strand, within B158DRAFT_0140at 138.835 kb on + strand, within B158DRAFT_0140at 138.835 kb on + strand, within B158DRAFT_0140at 138.843 kb on - strand, within B158DRAFT_0140at 138.843 kb on - strand, within B158DRAFT_0140at 138.866 kb on - strand, within B158DRAFT_0140

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. A22 0.0109375 mg/ml
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136,191 + +0.1
136,193 - +0.4
136,255 + -1.4
136,298 + -0.3
136,511 + -2.5
136,568 + B158DRAFT_0138 0.17 -0.6
136,570 - B158DRAFT_0138 0.17 -1.0
136,592 + B158DRAFT_0138 0.20 -0.1
136,623 - B158DRAFT_0138 0.24 -1.3
136,625 + B158DRAFT_0138 0.25 +0.9
136,630 + B158DRAFT_0138 0.25 +0.1
136,630 + B158DRAFT_0138 0.25 +0.3
136,633 - B158DRAFT_0138 0.26 -1.6
136,633 - B158DRAFT_0138 0.26 -1.6
136,691 + B158DRAFT_0138 0.33 -1.4
136,699 - B158DRAFT_0138 0.34 -1.4
136,699 - B158DRAFT_0138 0.34 -1.6
136,699 - B158DRAFT_0138 0.34 -2.8
136,699 - B158DRAFT_0138 0.34 -1.9
136,753 + B158DRAFT_0138 0.42 -3.2
136,768 + B158DRAFT_0138 0.44 -1.3
136,790 - B158DRAFT_0138 0.47 -2.0
136,797 - B158DRAFT_0138 0.47 -1.4
136,837 + B158DRAFT_0138 0.53 -0.9
136,845 - B158DRAFT_0138 0.54 -1.4
136,877 - B158DRAFT_0138 0.58 -2.2
136,909 + B158DRAFT_0138 0.62 -1.3
137,008 - B158DRAFT_0138 0.76 -2.5
137,010 + B158DRAFT_0138 0.76 -0.2
137,028 + B158DRAFT_0138 0.78 -0.6
137,042 - B158DRAFT_0138 0.80 -0.8
137,109 + B158DRAFT_0138 0.89 -1.4
137,240 + +0.4
137,245 - +0.6
137,272 + B158DRAFT_0139 0.12 -0.5
137,272 + B158DRAFT_0139 0.12 -0.4
137,272 + B158DRAFT_0139 0.12 -0.6
137,272 + B158DRAFT_0139 0.12 -0.7
137,272 + B158DRAFT_0139 0.12 -0.2
137,272 + B158DRAFT_0139 0.12 -0.1
137,272 + B158DRAFT_0139 0.12 +0.1
137,279 + B158DRAFT_0139 0.13 +0.2
137,280 - B158DRAFT_0139 0.13 +0.4
137,280 - B158DRAFT_0139 0.13 -0.1
137,280 - B158DRAFT_0139 0.13 +0.2
137,280 - B158DRAFT_0139 0.13 -1.6
137,280 - B158DRAFT_0139 0.13 -0.2
137,280 - B158DRAFT_0139 0.13 -0.3
137,280 - B158DRAFT_0139 0.13 +0.8
137,280 - B158DRAFT_0139 0.13 +1.7
137,280 - B158DRAFT_0139 0.13 +0.0
137,280 - B158DRAFT_0139 0.13 +0.1
137,280 - B158DRAFT_0139 0.13 +0.6
137,280 - B158DRAFT_0139 0.13 -0.5
137,280 - B158DRAFT_0139 0.13 -1.1
137,280 - B158DRAFT_0139 0.13 +0.7
137,280 - B158DRAFT_0139 0.13 -0.0
137,280 - B158DRAFT_0139 0.13 -0.8
137,298 + B158DRAFT_0139 0.16 +0.0
137,351 - B158DRAFT_0139 0.24 -0.9
137,482 + B158DRAFT_0139 0.43 -0.4
137,482 + B158DRAFT_0139 0.43 -0.4
137,482 + B158DRAFT_0139 0.43 -0.1
137,490 - B158DRAFT_0139 0.44 -0.1
137,490 - B158DRAFT_0139 0.44 +0.1
137,490 - B158DRAFT_0139 0.44 +1.3
137,490 - B158DRAFT_0139 0.44 -0.4
137,490 - B158DRAFT_0139 0.44 +0.9
137,490 - B158DRAFT_0139 0.44 +0.1
137,490 - B158DRAFT_0139 0.44 -0.1
137,490 - B158DRAFT_0139 0.44 -0.3
137,490 - B158DRAFT_0139 0.44 +0.4
137,550 - B158DRAFT_0139 0.53 -0.4
137,567 - B158DRAFT_0139 0.55 -0.3
137,567 - B158DRAFT_0139 0.55 -0.3
137,578 + B158DRAFT_0139 0.57 +0.4
137,596 - B158DRAFT_0139 0.59 -0.2
137,690 + B158DRAFT_0139 0.73 -0.8
137,711 - B158DRAFT_0139 0.76 -1.7
137,726 + B158DRAFT_0139 0.78 -0.2
137,743 - B158DRAFT_0139 0.81 -0.1
137,772 - B158DRAFT_0139 0.85 -0.4
137,800 + B158DRAFT_0139 0.89 +0.5
137,800 + B158DRAFT_0139 0.89 -0.4
137,800 + B158DRAFT_0139 0.89 -0.3
137,808 - -0.3
137,808 - -0.3
137,808 - +0.3
137,810 + -0.3
137,905 + -0.6
137,910 + -0.0
137,910 + -0.6
137,910 + +0.1
137,918 - -0.3
137,923 - +0.4
137,923 - -0.7
137,931 + +0.5
137,939 - +0.0
137,942 - -0.0
137,942 - +0.4
138,009 + -0.1
138,009 + -1.4
138,017 + -0.5
138,017 - +0.2
138,025 - +0.1
138,035 + +0.6
138,069 - -0.0
138,069 - -0.5
138,094 + B158DRAFT_0140 0.11 -0.3
138,102 - B158DRAFT_0140 0.11 +0.0
138,102 - B158DRAFT_0140 0.11 +0.2
138,123 - B158DRAFT_0140 0.13 -0.2
138,141 + B158DRAFT_0140 0.14 +1.0
138,168 - B158DRAFT_0140 0.15 +1.3
138,262 + B158DRAFT_0140 0.21 +0.6
138,270 + B158DRAFT_0140 0.21 -0.5
138,295 + B158DRAFT_0140 0.22 +0.7
138,313 - B158DRAFT_0140 0.23 +0.0
138,323 - B158DRAFT_0140 0.24 +0.0
138,323 - B158DRAFT_0140 0.24 -0.5
138,333 - B158DRAFT_0140 0.25 +0.1
138,368 - B158DRAFT_0140 0.27 +0.3
138,566 - B158DRAFT_0140 0.38 +0.1
138,571 - B158DRAFT_0140 0.38 -0.2
138,602 - B158DRAFT_0140 0.40 +0.2
138,633 - B158DRAFT_0140 0.42 +0.4
138,741 + B158DRAFT_0140 0.48 +1.1
138,747 + B158DRAFT_0140 0.48 -0.4
138,747 + B158DRAFT_0140 0.48 +0.8
138,749 - B158DRAFT_0140 0.48 -1.9
138,835 + B158DRAFT_0140 0.53 -0.8
138,835 + B158DRAFT_0140 0.53 -0.1
138,843 - B158DRAFT_0140 0.54 +1.1
138,843 - B158DRAFT_0140 0.54 -1.2
138,866 - B158DRAFT_0140 0.55 +0.0

Or see this region's nucleotide sequence