Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1642

Experiment: m.b. Bacitracin 1.5 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1641 and B158DRAFT_1642 overlap by 8 nucleotidesB158DRAFT_1642 and B158DRAFT_1643 are separated by 18 nucleotides B158DRAFT_1641: B158DRAFT_1641 - type I site-specific deoxyribonuclease, HsdR family, at 1,705,652 to 1,708,894 _1641 B158DRAFT_1642: B158DRAFT_1642 - hypothetical protein, at 1,708,887 to 1,712,168 _1642 B158DRAFT_1643: B158DRAFT_1643 - Restriction endonuclease S subunits, at 1,712,187 to 1,713,545 _1643 Position (kb) 1708 1709 1710 1711 1712 1713Strain fitness (log2 ratio) -1 0 1at 1707.909 kb on + strand, within B158DRAFT_1641at 1707.958 kb on - strand, within B158DRAFT_1641at 1708.011 kb on + strand, within B158DRAFT_1641at 1708.011 kb on + strand, within B158DRAFT_1641at 1708.011 kb on + strand, within B158DRAFT_1641at 1708.011 kb on + strand, within B158DRAFT_1641at 1708.011 kb on + strand, within B158DRAFT_1641at 1708.011 kb on + strand, within B158DRAFT_1641at 1708.019 kb on - strand, within B158DRAFT_1641at 1708.019 kb on - strand, within B158DRAFT_1641at 1708.019 kb on - strand, within B158DRAFT_1641at 1708.019 kb on - strand, within B158DRAFT_1641at 1708.142 kb on + strand, within B158DRAFT_1641at 1708.156 kb on + strand, within B158DRAFT_1641at 1708.234 kb on + strand, within B158DRAFT_1641at 1708.240 kb on - strand, within B158DRAFT_1641at 1708.382 kb on - strand, within B158DRAFT_1641at 1708.664 kb on + strandat 1708.739 kb on - strandat 1708.803 kb on + strandat 1708.812 kb on - strandat 1708.827 kb on + strandat 1708.832 kb on + strandat 1708.835 kb on - strandat 1708.835 kb on - strandat 1708.840 kb on - strandat 1708.864 kb on + strandat 1709.062 kb on - strandat 1709.096 kb on + strandat 1709.104 kb on - strandat 1709.126 kb on + strandat 1709.177 kb on + strandat 1709.813 kb on + strand, within B158DRAFT_1642at 1709.813 kb on - strand, within B158DRAFT_1642at 1709.821 kb on - strand, within B158DRAFT_1642at 1709.869 kb on + strand, within B158DRAFT_1642at 1709.944 kb on - strand, within B158DRAFT_1642at 1709.975 kb on - strand, within B158DRAFT_1642at 1710.016 kb on - strand, within B158DRAFT_1642at 1710.129 kb on + strand, within B158DRAFT_1642at 1710.129 kb on + strand, within B158DRAFT_1642at 1710.137 kb on - strand, within B158DRAFT_1642at 1710.147 kb on - strand, within B158DRAFT_1642at 1710.182 kb on + strand, within B158DRAFT_1642at 1710.476 kb on - strand, within B158DRAFT_1642at 1710.494 kb on - strand, within B158DRAFT_1642at 1710.539 kb on + strand, within B158DRAFT_1642at 1710.539 kb on + strand, within B158DRAFT_1642at 1710.714 kb on + strand, within B158DRAFT_1642at 1710.881 kb on + strand, within B158DRAFT_1642at 1711.033 kb on - strand, within B158DRAFT_1642at 1711.073 kb on - strand, within B158DRAFT_1642at 1711.148 kb on + strand, within B158DRAFT_1642at 1711.233 kb on - strand, within B158DRAFT_1642at 1711.682 kb on + strand, within B158DRAFT_1642at 1712.018 kb on + strandat 1712.046 kb on + strandat 1712.054 kb on - strandat 1712.072 kb on - strandat 1712.137 kb on - strandat 1712.393 kb on - strand, within B158DRAFT_1643at 1712.421 kb on + strand, within B158DRAFT_1643at 1712.429 kb on - strand, within B158DRAFT_1643at 1712.429 kb on - strand, within B158DRAFT_1643at 1712.435 kb on - strand, within B158DRAFT_1643at 1712.435 kb on - strand, within B158DRAFT_1643at 1712.485 kb on + strand, within B158DRAFT_1643at 1712.485 kb on + strand, within B158DRAFT_1643at 1712.488 kb on - strand, within B158DRAFT_1643at 1712.567 kb on + strand, within B158DRAFT_1643at 1712.575 kb on - strand, within B158DRAFT_1643at 1712.575 kb on - strand, within B158DRAFT_1643at 1712.619 kb on + strand, within B158DRAFT_1643at 1712.682 kb on + strand, within B158DRAFT_1643at 1712.733 kb on - strand, within B158DRAFT_1643at 1712.791 kb on + strand, within B158DRAFT_1643at 1712.818 kb on - strand, within B158DRAFT_1643at 1712.846 kb on + strand, within B158DRAFT_1643at 1712.854 kb on - strand, within B158DRAFT_1643at 1712.854 kb on - strand, within B158DRAFT_1643at 1712.854 kb on - strand, within B158DRAFT_1643at 1712.903 kb on - strand, within B158DRAFT_1643at 1713.017 kb on + strand, within B158DRAFT_1643at 1713.025 kb on - strand, within B158DRAFT_1643at 1713.025 kb on - strand, within B158DRAFT_1643at 1713.159 kb on + strand, within B158DRAFT_1643at 1713.159 kb on + strand, within B158DRAFT_1643

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml
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1,707,909 + B158DRAFT_1641 0.70 -0.4
1,707,958 - B158DRAFT_1641 0.71 -0.3
1,708,011 + B158DRAFT_1641 0.73 -1.0
1,708,011 + B158DRAFT_1641 0.73 -0.1
1,708,011 + B158DRAFT_1641 0.73 -0.1
1,708,011 + B158DRAFT_1641 0.73 -0.4
1,708,011 + B158DRAFT_1641 0.73 +1.2
1,708,011 + B158DRAFT_1641 0.73 -0.1
1,708,019 - B158DRAFT_1641 0.73 +0.7
1,708,019 - B158DRAFT_1641 0.73 -1.0
1,708,019 - B158DRAFT_1641 0.73 -0.4
1,708,019 - B158DRAFT_1641 0.73 -0.9
1,708,142 + B158DRAFT_1641 0.77 -0.1
1,708,156 + B158DRAFT_1641 0.77 +0.0
1,708,234 + B158DRAFT_1641 0.80 -0.2
1,708,240 - B158DRAFT_1641 0.80 +0.1
1,708,382 - B158DRAFT_1641 0.84 -0.6
1,708,664 + -0.1
1,708,739 - +0.6
1,708,803 + -0.2
1,708,812 - -0.2
1,708,827 + -0.0
1,708,832 + +0.5
1,708,835 - +0.1
1,708,835 - -0.0
1,708,840 - +0.5
1,708,864 + +0.9
1,709,062 - +0.3
1,709,096 + -0.7
1,709,104 - -0.1
1,709,126 + -0.8
1,709,177 + +0.4
1,709,813 + B158DRAFT_1642 0.28 +1.3
1,709,813 - B158DRAFT_1642 0.28 -0.6
1,709,821 - B158DRAFT_1642 0.28 +0.4
1,709,869 + B158DRAFT_1642 0.30 +0.2
1,709,944 - B158DRAFT_1642 0.32 +0.2
1,709,975 - B158DRAFT_1642 0.33 -0.1
1,710,016 - B158DRAFT_1642 0.34 -0.3
1,710,129 + B158DRAFT_1642 0.38 +0.0
1,710,129 + B158DRAFT_1642 0.38 -0.3
1,710,137 - B158DRAFT_1642 0.38 -0.8
1,710,147 - B158DRAFT_1642 0.38 -0.3
1,710,182 + B158DRAFT_1642 0.39 -0.3
1,710,476 - B158DRAFT_1642 0.48 -1.1
1,710,494 - B158DRAFT_1642 0.49 -0.4
1,710,539 + B158DRAFT_1642 0.50 -0.3
1,710,539 + B158DRAFT_1642 0.50 -0.2
1,710,714 + B158DRAFT_1642 0.56 -0.4
1,710,881 + B158DRAFT_1642 0.61 -0.6
1,711,033 - B158DRAFT_1642 0.65 -1.1
1,711,073 - B158DRAFT_1642 0.67 -0.9
1,711,148 + B158DRAFT_1642 0.69 -0.5
1,711,233 - B158DRAFT_1642 0.71 +0.4
1,711,682 + B158DRAFT_1642 0.85 -0.1
1,712,018 + -0.1
1,712,046 + -0.1
1,712,054 - -0.0
1,712,072 - -0.2
1,712,137 - -0.7
1,712,393 - B158DRAFT_1643 0.15 -0.6
1,712,421 + B158DRAFT_1643 0.17 -0.8
1,712,429 - B158DRAFT_1643 0.18 +0.1
1,712,429 - B158DRAFT_1643 0.18 +0.3
1,712,435 - B158DRAFT_1643 0.18 -0.3
1,712,435 - B158DRAFT_1643 0.18 -1.5
1,712,485 + B158DRAFT_1643 0.22 -0.1
1,712,485 + B158DRAFT_1643 0.22 -0.2
1,712,488 - B158DRAFT_1643 0.22 +0.0
1,712,567 + B158DRAFT_1643 0.28 -0.6
1,712,575 - B158DRAFT_1643 0.29 -0.3
1,712,575 - B158DRAFT_1643 0.29 -0.2
1,712,619 + B158DRAFT_1643 0.32 +0.5
1,712,682 + B158DRAFT_1643 0.36 -0.6
1,712,733 - B158DRAFT_1643 0.40 -0.5
1,712,791 + B158DRAFT_1643 0.44 -0.3
1,712,818 - B158DRAFT_1643 0.46 -0.3
1,712,846 + B158DRAFT_1643 0.48 -0.4
1,712,854 - B158DRAFT_1643 0.49 -0.2
1,712,854 - B158DRAFT_1643 0.49 -0.0
1,712,854 - B158DRAFT_1643 0.49 +0.1
1,712,903 - B158DRAFT_1643 0.53 -0.7
1,713,017 + B158DRAFT_1643 0.61 +0.4
1,713,025 - B158DRAFT_1643 0.62 +0.1
1,713,025 - B158DRAFT_1643 0.62 -0.5
1,713,159 + B158DRAFT_1643 0.72 -0.2
1,713,159 + B158DRAFT_1643 0.72 -0.3

Or see this region's nucleotide sequence