Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1617

Experiment: m.b. Bacitracin 1.5 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1616 and B158DRAFT_1617 are separated by 16 nucleotidesB158DRAFT_1617 and B158DRAFT_1618 are separated by 256 nucleotides B158DRAFT_1616: B158DRAFT_1616 - copper-(or silver)-translocating P-type ATPase, at 1,675,449 to 1,677,701 _1616 B158DRAFT_1617: B158DRAFT_1617 - hypothetical protein, at 1,677,718 to 1,678,080 _1617 B158DRAFT_1618: B158DRAFT_1618 - sodium/proton antiporter, NhaD family (TC 2.A.62), at 1,678,337 to 1,679,740 _1618 Position (kb) 1677 1678 1679Strain fitness (log2 ratio) -1 0 1at 1676.880 kb on + strand, within B158DRAFT_1616at 1677.085 kb on - strand, within B158DRAFT_1616at 1677.248 kb on - strand, within B158DRAFT_1616at 1677.279 kb on - strand, within B158DRAFT_1616at 1677.339 kb on + strand, within B158DRAFT_1616at 1677.340 kb on - strand, within B158DRAFT_1616at 1677.383 kb on + strand, within B158DRAFT_1616at 1677.446 kb on - strand, within B158DRAFT_1616at 1677.446 kb on - strand, within B158DRAFT_1616at 1677.457 kb on + strand, within B158DRAFT_1616at 1677.457 kb on + strand, within B158DRAFT_1616at 1677.465 kb on - strand, within B158DRAFT_1616at 1677.470 kb on - strand, within B158DRAFT_1616at 1677.477 kb on - strandat 1677.490 kb on + strandat 1677.517 kb on + strandat 1677.519 kb on - strandat 1677.573 kb on + strandat 1677.581 kb on - strandat 1677.581 kb on - strandat 1677.581 kb on - strandat 1677.581 kb on - strandat 1677.602 kb on + strandat 1677.605 kb on - strandat 1677.648 kb on - strandat 1677.651 kb on + strandat 1677.651 kb on + strandat 1677.651 kb on + strandat 1677.656 kb on + strandat 1677.659 kb on - strandat 1677.695 kb on + strandat 1677.703 kb on - strandat 1677.746 kb on + strandat 1677.746 kb on + strandat 1677.754 kb on - strandat 1677.754 kb on - strandat 1677.754 kb on - strandat 1677.754 kb on - strandat 1677.802 kb on - strand, within B158DRAFT_1617at 1677.814 kb on + strand, within B158DRAFT_1617at 1677.814 kb on + strand, within B158DRAFT_1617at 1677.856 kb on - strand, within B158DRAFT_1617at 1677.870 kb on - strand, within B158DRAFT_1617at 1677.870 kb on - strand, within B158DRAFT_1617at 1678.053 kb on + strandat 1678.053 kb on + strandat 1678.114 kb on + strandat 1678.120 kb on + strandat 1678.127 kb on + strandat 1678.128 kb on - strandat 1678.128 kb on - strandat 1678.154 kb on + strandat 1678.201 kb on + strandat 1678.209 kb on - strandat 1678.221 kb on - strandat 1678.277 kb on + strandat 1678.285 kb on - strandat 1678.293 kb on + strandat 1678.322 kb on + strandat 1678.480 kb on - strand, within B158DRAFT_1618at 1678.516 kb on + strand, within B158DRAFT_1618at 1678.547 kb on + strand, within B158DRAFT_1618at 1678.547 kb on + strand, within B158DRAFT_1618at 1678.555 kb on - strand, within B158DRAFT_1618at 1678.555 kb on - strand, within B158DRAFT_1618at 1678.555 kb on - strand, within B158DRAFT_1618at 1678.674 kb on + strand, within B158DRAFT_1618at 1678.713 kb on - strand, within B158DRAFT_1618at 1678.739 kb on + strand, within B158DRAFT_1618at 1678.754 kb on + strand, within B158DRAFT_1618at 1678.767 kb on - strand, within B158DRAFT_1618at 1678.767 kb on - strand, within B158DRAFT_1618at 1678.770 kb on + strand, within B158DRAFT_1618at 1678.808 kb on + strand, within B158DRAFT_1618at 1678.808 kb on + strand, within B158DRAFT_1618at 1678.808 kb on + strand, within B158DRAFT_1618at 1678.816 kb on - strand, within B158DRAFT_1618at 1678.816 kb on - strand, within B158DRAFT_1618at 1678.816 kb on - strand, within B158DRAFT_1618at 1678.816 kb on - strand, within B158DRAFT_1618at 1678.818 kb on - strand, within B158DRAFT_1618at 1678.818 kb on - strand, within B158DRAFT_1618at 1678.820 kb on + strand, within B158DRAFT_1618at 1678.877 kb on + strand, within B158DRAFT_1618at 1678.885 kb on - strand, within B158DRAFT_1618at 1678.885 kb on - strand, within B158DRAFT_1618at 1678.895 kb on - strand, within B158DRAFT_1618at 1679.002 kb on + strand, within B158DRAFT_1618at 1679.071 kb on + strand, within B158DRAFT_1618at 1679.079 kb on + strand, within B158DRAFT_1618

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml
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1,676,880 + B158DRAFT_1616 0.64 -0.3
1,677,085 - B158DRAFT_1616 0.73 +0.5
1,677,248 - B158DRAFT_1616 0.80 -0.2
1,677,279 - B158DRAFT_1616 0.81 -0.2
1,677,339 + B158DRAFT_1616 0.84 +0.0
1,677,340 - B158DRAFT_1616 0.84 -0.5
1,677,383 + B158DRAFT_1616 0.86 -0.5
1,677,446 - B158DRAFT_1616 0.89 +0.1
1,677,446 - B158DRAFT_1616 0.89 +1.1
1,677,457 + B158DRAFT_1616 0.89 +0.1
1,677,457 + B158DRAFT_1616 0.89 +0.1
1,677,465 - B158DRAFT_1616 0.89 -0.5
1,677,470 - B158DRAFT_1616 0.90 -0.2
1,677,477 - +0.2
1,677,490 + -0.4
1,677,517 + +0.6
1,677,519 - -0.2
1,677,573 + -0.3
1,677,581 - -1.0
1,677,581 - -0.5
1,677,581 - -0.1
1,677,581 - -0.7
1,677,602 + -0.1
1,677,605 - +0.3
1,677,648 - -0.3
1,677,651 + -0.7
1,677,651 + +0.0
1,677,651 + +0.9
1,677,656 + +0.3
1,677,659 - +0.4
1,677,695 + +0.2
1,677,703 - -0.1
1,677,746 + -0.1
1,677,746 + +0.2
1,677,754 - +0.9
1,677,754 - +0.2
1,677,754 - -0.1
1,677,754 - -0.2
1,677,802 - B158DRAFT_1617 0.23 -0.0
1,677,814 + B158DRAFT_1617 0.26 -1.3
1,677,814 + B158DRAFT_1617 0.26 +0.3
1,677,856 - B158DRAFT_1617 0.38 +0.2
1,677,870 - B158DRAFT_1617 0.42 -0.2
1,677,870 - B158DRAFT_1617 0.42 +0.3
1,678,053 + -0.5
1,678,053 + +0.4
1,678,114 + -0.2
1,678,120 + +0.3
1,678,127 + +0.8
1,678,128 - -0.3
1,678,128 - +0.6
1,678,154 + +0.1
1,678,201 + -0.3
1,678,209 - +0.5
1,678,221 - -0.2
1,678,277 + +0.4
1,678,285 - +0.9
1,678,293 + +0.3
1,678,322 + +0.2
1,678,480 - B158DRAFT_1618 0.10 +0.6
1,678,516 + B158DRAFT_1618 0.13 +1.7
1,678,547 + B158DRAFT_1618 0.15 +0.3
1,678,547 + B158DRAFT_1618 0.15 +0.7
1,678,555 - B158DRAFT_1618 0.16 -0.1
1,678,555 - B158DRAFT_1618 0.16 +1.0
1,678,555 - B158DRAFT_1618 0.16 +1.4
1,678,674 + B158DRAFT_1618 0.24 +0.5
1,678,713 - B158DRAFT_1618 0.27 +0.3
1,678,739 + B158DRAFT_1618 0.29 +0.8
1,678,754 + B158DRAFT_1618 0.30 +0.2
1,678,767 - B158DRAFT_1618 0.31 +0.9
1,678,767 - B158DRAFT_1618 0.31 +1.1
1,678,770 + B158DRAFT_1618 0.31 +0.9
1,678,808 + B158DRAFT_1618 0.34 +0.3
1,678,808 + B158DRAFT_1618 0.34 -0.5
1,678,808 + B158DRAFT_1618 0.34 +0.5
1,678,816 - B158DRAFT_1618 0.34 +0.6
1,678,816 - B158DRAFT_1618 0.34 +0.3
1,678,816 - B158DRAFT_1618 0.34 +1.0
1,678,816 - B158DRAFT_1618 0.34 +0.9
1,678,818 - B158DRAFT_1618 0.34 +0.6
1,678,818 - B158DRAFT_1618 0.34 +0.2
1,678,820 + B158DRAFT_1618 0.34 -0.9
1,678,877 + B158DRAFT_1618 0.38 +0.6
1,678,885 - B158DRAFT_1618 0.39 +0.4
1,678,885 - B158DRAFT_1618 0.39 -0.1
1,678,895 - B158DRAFT_1618 0.40 +0.8
1,679,002 + B158DRAFT_1618 0.47 +0.5
1,679,071 + B158DRAFT_1618 0.52 +0.9
1,679,079 + B158DRAFT_1618 0.53 +1.3

Or see this region's nucleotide sequence