Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1236

Experiment: m.b. Bacitracin 1.5 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1235 and B158DRAFT_1236 are separated by 316 nucleotidesB158DRAFT_1236 and B158DRAFT_1237 are separated by 11 nucleotidesB158DRAFT_1237 and B158DRAFT_1238 are separated by 29 nucleotides B158DRAFT_1235: B158DRAFT_1235 - Peroxiredoxin, at 1,273,013 to 1,273,618 _1235 B158DRAFT_1236: B158DRAFT_1236 - hypothetical protein, at 1,273,935 to 1,275,020 _1236 B158DRAFT_1237: B158DRAFT_1237 - hypothetical protein, at 1,275,032 to 1,275,466 _1237 B158DRAFT_1238: B158DRAFT_1238 - Asparaginase, at 1,275,496 to 1,276,518 _1238 Position (kb) 1273 1274 1275 1276Strain fitness (log2 ratio) -2 -1 0 1at 1273.061 kb on + strandat 1273.061 kb on + strandat 1273.061 kb on + strandat 1273.061 kb on + strandat 1273.069 kb on - strandat 1273.069 kb on - strandat 1273.069 kb on - strandat 1273.069 kb on - strandat 1273.088 kb on + strand, within B158DRAFT_1235at 1273.142 kb on + strand, within B158DRAFT_1235at 1273.142 kb on + strand, within B158DRAFT_1235at 1273.142 kb on + strand, within B158DRAFT_1235at 1273.150 kb on - strand, within B158DRAFT_1235at 1273.150 kb on - strand, within B158DRAFT_1235at 1273.202 kb on - strand, within B158DRAFT_1235at 1273.218 kb on + strand, within B158DRAFT_1235at 1273.218 kb on + strand, within B158DRAFT_1235at 1273.218 kb on + strand, within B158DRAFT_1235at 1273.221 kb on - strand, within B158DRAFT_1235at 1273.226 kb on - strandat 1273.270 kb on + strand, within B158DRAFT_1235at 1273.270 kb on + strand, within B158DRAFT_1235at 1273.270 kb on + strand, within B158DRAFT_1235at 1273.270 kb on + strand, within B158DRAFT_1235at 1273.270 kb on + strand, within B158DRAFT_1235at 1273.270 kb on + strand, within B158DRAFT_1235at 1273.278 kb on - strand, within B158DRAFT_1235at 1273.278 kb on - strand, within B158DRAFT_1235at 1273.278 kb on - strand, within B158DRAFT_1235at 1273.308 kb on - strand, within B158DRAFT_1235at 1273.310 kb on + strand, within B158DRAFT_1235at 1273.446 kb on - strand, within B158DRAFT_1235at 1273.496 kb on + strand, within B158DRAFT_1235at 1273.496 kb on + strand, within B158DRAFT_1235at 1273.496 kb on + strand, within B158DRAFT_1235at 1273.496 kb on + strand, within B158DRAFT_1235at 1273.588 kb on + strandat 1273.588 kb on + strandat 1273.588 kb on + strandat 1273.596 kb on - strandat 1273.596 kb on - strandat 1273.596 kb on - strandat 1273.596 kb on - strandat 1273.668 kb on + strandat 1273.717 kb on + strandat 1273.834 kb on - strandat 1273.834 kb on - strandat 1273.916 kb on - strandat 1273.916 kb on - strandat 1274.083 kb on + strand, within B158DRAFT_1236at 1274.244 kb on + strand, within B158DRAFT_1236at 1274.420 kb on + strand, within B158DRAFT_1236at 1274.433 kb on - strand, within B158DRAFT_1236at 1274.594 kb on + strand, within B158DRAFT_1236at 1274.602 kb on - strand, within B158DRAFT_1236at 1274.711 kb on + strand, within B158DRAFT_1236at 1274.727 kb on - strand, within B158DRAFT_1236at 1274.727 kb on - strand, within B158DRAFT_1236at 1274.745 kb on - strand, within B158DRAFT_1236at 1274.872 kb on + strand, within B158DRAFT_1236at 1274.878 kb on + strand, within B158DRAFT_1236at 1275.015 kb on + strandat 1275.244 kb on + strand, within B158DRAFT_1237at 1275.244 kb on + strand, within B158DRAFT_1237at 1275.244 kb on + strand, within B158DRAFT_1237at 1275.252 kb on - strand, within B158DRAFT_1237at 1275.252 kb on - strand, within B158DRAFT_1237at 1275.310 kb on - strand, within B158DRAFT_1237at 1275.337 kb on + strand, within B158DRAFT_1237at 1275.337 kb on + strand, within B158DRAFT_1237at 1275.344 kb on - strand, within B158DRAFT_1237at 1275.386 kb on - strand, within B158DRAFT_1237at 1275.526 kb on - strandat 1275.548 kb on + strandat 1275.548 kb on + strandat 1275.566 kb on + strandat 1275.568 kb on + strandat 1275.634 kb on - strand, within B158DRAFT_1238at 1275.640 kb on - strand, within B158DRAFT_1238at 1275.676 kb on + strand, within B158DRAFT_1238at 1275.684 kb on - strand, within B158DRAFT_1238at 1275.684 kb on - strand, within B158DRAFT_1238at 1275.684 kb on - strand, within B158DRAFT_1238at 1275.723 kb on - strand, within B158DRAFT_1238at 1275.774 kb on + strand, within B158DRAFT_1238at 1275.848 kb on + strand, within B158DRAFT_1238at 1275.854 kb on - strand, within B158DRAFT_1238at 1275.888 kb on + strand, within B158DRAFT_1238at 1275.888 kb on + strand, within B158DRAFT_1238at 1275.896 kb on - strand, within B158DRAFT_1238at 1275.948 kb on + strand, within B158DRAFT_1238at 1275.994 kb on - strand, within B158DRAFT_1238

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml
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1,273,061 + +0.8
1,273,061 + +0.7
1,273,061 + -0.9
1,273,061 + -0.1
1,273,069 - +0.0
1,273,069 - -0.6
1,273,069 - -0.6
1,273,069 - -0.6
1,273,088 + B158DRAFT_1235 0.12 -0.9
1,273,142 + B158DRAFT_1235 0.21 +0.3
1,273,142 + B158DRAFT_1235 0.21 +0.3
1,273,142 + B158DRAFT_1235 0.21 +0.5
1,273,150 - B158DRAFT_1235 0.23 -0.5
1,273,150 - B158DRAFT_1235 0.23 -0.4
1,273,202 - B158DRAFT_1235 0.31 -0.5
1,273,218 + B158DRAFT_1235 0.34 +0.2
1,273,218 + B158DRAFT_1235 0.34 +0.2
1,273,218 + B158DRAFT_1235 0.34 -0.9
1,273,221 - B158DRAFT_1235 0.34 -0.9
1,273,226 - -2.1
1,273,270 + B158DRAFT_1235 0.42 -0.2
1,273,270 + B158DRAFT_1235 0.42 -0.1
1,273,270 + B158DRAFT_1235 0.42 -0.1
1,273,270 + B158DRAFT_1235 0.42 -0.1
1,273,270 + B158DRAFT_1235 0.42 -0.3
1,273,270 + B158DRAFT_1235 0.42 +0.1
1,273,278 - B158DRAFT_1235 0.44 -0.0
1,273,278 - B158DRAFT_1235 0.44 +0.0
1,273,278 - B158DRAFT_1235 0.44 -2.6
1,273,308 - B158DRAFT_1235 0.49 -0.8
1,273,310 + B158DRAFT_1235 0.49 -0.6
1,273,446 - B158DRAFT_1235 0.71 -0.1
1,273,496 + B158DRAFT_1235 0.80 -0.1
1,273,496 + B158DRAFT_1235 0.80 -0.2
1,273,496 + B158DRAFT_1235 0.80 -0.1
1,273,496 + B158DRAFT_1235 0.80 +1.5
1,273,588 + -0.5
1,273,588 + -0.3
1,273,588 + +0.1
1,273,596 - +0.1
1,273,596 - -0.5
1,273,596 - -0.1
1,273,596 - +0.4
1,273,668 + -0.0
1,273,717 + +0.2
1,273,834 - -0.1
1,273,834 - -0.6
1,273,916 - -0.2
1,273,916 - -0.2
1,274,083 + B158DRAFT_1236 0.14 -0.1
1,274,244 + B158DRAFT_1236 0.28 -0.0
1,274,420 + B158DRAFT_1236 0.45 +0.3
1,274,433 - B158DRAFT_1236 0.46 +0.2
1,274,594 + B158DRAFT_1236 0.61 -0.0
1,274,602 - B158DRAFT_1236 0.61 +0.1
1,274,711 + B158DRAFT_1236 0.71 -0.0
1,274,727 - B158DRAFT_1236 0.73 +1.0
1,274,727 - B158DRAFT_1236 0.73 -0.3
1,274,745 - B158DRAFT_1236 0.75 -0.2
1,274,872 + B158DRAFT_1236 0.86 -1.0
1,274,878 + B158DRAFT_1236 0.87 -0.0
1,275,015 + -0.2
1,275,244 + B158DRAFT_1237 0.49 +0.4
1,275,244 + B158DRAFT_1237 0.49 -0.2
1,275,244 + B158DRAFT_1237 0.49 +0.0
1,275,252 - B158DRAFT_1237 0.51 +0.5
1,275,252 - B158DRAFT_1237 0.51 +0.4
1,275,310 - B158DRAFT_1237 0.64 +0.2
1,275,337 + B158DRAFT_1237 0.70 -0.5
1,275,337 + B158DRAFT_1237 0.70 -0.1
1,275,344 - B158DRAFT_1237 0.72 +0.7
1,275,386 - B158DRAFT_1237 0.81 +0.4
1,275,526 - -0.8
1,275,548 + +0.3
1,275,548 + -0.3
1,275,566 + -0.2
1,275,568 + -0.3
1,275,634 - B158DRAFT_1238 0.13 -0.4
1,275,640 - B158DRAFT_1238 0.14 -0.9
1,275,676 + B158DRAFT_1238 0.18 +0.4
1,275,684 - B158DRAFT_1238 0.18 +0.3
1,275,684 - B158DRAFT_1238 0.18 +0.0
1,275,684 - B158DRAFT_1238 0.18 -0.3
1,275,723 - B158DRAFT_1238 0.22 -0.3
1,275,774 + B158DRAFT_1238 0.27 +0.2
1,275,848 + B158DRAFT_1238 0.34 +0.2
1,275,854 - B158DRAFT_1238 0.35 -0.3
1,275,888 + B158DRAFT_1238 0.38 +0.3
1,275,888 + B158DRAFT_1238 0.38 +0.2
1,275,896 - B158DRAFT_1238 0.39 -0.7
1,275,948 + B158DRAFT_1238 0.44 +0.2
1,275,994 - B158DRAFT_1238 0.49 -0.9

Or see this region's nucleotide sequence