Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0620

Experiment: m.b. Bacitracin 1.5 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0618 and B158DRAFT_0619 are separated by 148 nucleotidesB158DRAFT_0619 and B158DRAFT_0620 are separated by 176 nucleotidesB158DRAFT_0620 and B158DRAFT_0621 are separated by 28 nucleotides B158DRAFT_0618: B158DRAFT_0618 - Predicted transcriptional regulators, at 627,670 to 628,251 _0618 B158DRAFT_0619: B158DRAFT_0619 - hypothetical protein, at 628,400 to 628,909 _0619 B158DRAFT_0620: B158DRAFT_0620 - Uncharacterized conserved protein, at 629,086 to 630,033 _0620 B158DRAFT_0621: B158DRAFT_0621 - Deoxyribodipyrimidine photolyase, at 630,062 to 631,441 _0621 Position (kb) 629 630 631Strain fitness (log2 ratio) -3 -2 -1 0 1at 628.087 kb on + strand, within B158DRAFT_0618at 628.123 kb on + strand, within B158DRAFT_0618at 628.133 kb on + strand, within B158DRAFT_0618at 628.135 kb on - strand, within B158DRAFT_0618at 628.198 kb on - strandat 628.506 kb on - strand, within B158DRAFT_0619at 628.673 kb on - strand, within B158DRAFT_0619at 628.675 kb on + strand, within B158DRAFT_0619at 628.937 kb on - strandat 629.029 kb on + strandat 629.037 kb on - strandat 629.037 kb on - strandat 629.037 kb on - strandat 629.179 kb on - strandat 629.192 kb on + strand, within B158DRAFT_0620at 629.230 kb on + strand, within B158DRAFT_0620at 629.238 kb on - strand, within B158DRAFT_0620at 629.252 kb on + strand, within B158DRAFT_0620at 629.317 kb on - strand, within B158DRAFT_0620at 629.420 kb on + strand, within B158DRAFT_0620at 629.421 kb on + strand, within B158DRAFT_0620at 629.540 kb on + strand, within B158DRAFT_0620at 629.540 kb on + strand, within B158DRAFT_0620at 629.540 kb on + strand, within B158DRAFT_0620at 629.540 kb on + strand, within B158DRAFT_0620at 629.540 kb on + strand, within B158DRAFT_0620at 629.548 kb on - strand, within B158DRAFT_0620at 629.548 kb on - strand, within B158DRAFT_0620at 629.548 kb on - strand, within B158DRAFT_0620at 629.548 kb on - strand, within B158DRAFT_0620at 629.548 kb on - strand, within B158DRAFT_0620at 629.548 kb on - strand, within B158DRAFT_0620at 629.990 kb on - strandat 630.143 kb on - strandat 630.145 kb on + strandat 630.174 kb on + strandat 630.174 kb on + strandat 630.182 kb on - strandat 630.184 kb on + strandat 630.184 kb on + strandat 630.184 kb on + strandat 630.293 kb on - strand, within B158DRAFT_0621at 630.351 kb on - strand, within B158DRAFT_0621at 630.501 kb on - strand, within B158DRAFT_0621at 630.507 kb on - strand, within B158DRAFT_0621at 630.507 kb on - strand, within B158DRAFT_0621at 630.565 kb on - strand, within B158DRAFT_0621at 630.590 kb on + strand, within B158DRAFT_0621at 630.652 kb on + strand, within B158DRAFT_0621at 630.652 kb on + strand, within B158DRAFT_0621at 630.660 kb on - strand, within B158DRAFT_0621at 630.753 kb on - strand, within B158DRAFT_0621at 630.809 kb on + strand, within B158DRAFT_0621at 630.837 kb on - strand, within B158DRAFT_0621

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml
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628,087 + B158DRAFT_0618 0.72 +0.3
628,123 + B158DRAFT_0618 0.78 +0.6
628,133 + B158DRAFT_0618 0.80 -0.0
628,135 - B158DRAFT_0618 0.80 -0.1
628,198 - -0.0
628,506 - B158DRAFT_0619 0.21 +0.8
628,673 - B158DRAFT_0619 0.54 +0.5
628,675 + B158DRAFT_0619 0.54 +1.0
628,937 - -0.3
629,029 + -0.1
629,037 - +0.1
629,037 - -3.0
629,037 - +1.3
629,179 - -0.1
629,192 + B158DRAFT_0620 0.11 -0.1
629,230 + B158DRAFT_0620 0.15 -0.2
629,238 - B158DRAFT_0620 0.16 +0.5
629,252 + B158DRAFT_0620 0.18 -0.4
629,317 - B158DRAFT_0620 0.24 -0.1
629,420 + B158DRAFT_0620 0.35 -0.0
629,421 + B158DRAFT_0620 0.35 +0.6
629,540 + B158DRAFT_0620 0.48 +0.2
629,540 + B158DRAFT_0620 0.48 +0.4
629,540 + B158DRAFT_0620 0.48 -0.4
629,540 + B158DRAFT_0620 0.48 -0.4
629,540 + B158DRAFT_0620 0.48 -0.2
629,548 - B158DRAFT_0620 0.49 -0.6
629,548 - B158DRAFT_0620 0.49 -0.2
629,548 - B158DRAFT_0620 0.49 -0.2
629,548 - B158DRAFT_0620 0.49 +0.4
629,548 - B158DRAFT_0620 0.49 -0.4
629,548 - B158DRAFT_0620 0.49 +0.6
629,990 - +0.6
630,143 - -0.4
630,145 + +0.1
630,174 + -0.1
630,174 + +0.2
630,182 - +0.4
630,184 + -0.9
630,184 + +0.2
630,184 + +0.2
630,293 - B158DRAFT_0621 0.17 +0.1
630,351 - B158DRAFT_0621 0.21 -0.8
630,501 - B158DRAFT_0621 0.32 +0.1
630,507 - B158DRAFT_0621 0.32 +0.0
630,507 - B158DRAFT_0621 0.32 +0.0
630,565 - B158DRAFT_0621 0.36 -0.0
630,590 + B158DRAFT_0621 0.38 -0.4
630,652 + B158DRAFT_0621 0.43 -0.8
630,652 + B158DRAFT_0621 0.43 -0.4
630,660 - B158DRAFT_0621 0.43 -0.2
630,753 - B158DRAFT_0621 0.50 +0.3
630,809 + B158DRAFT_0621 0.54 -0.7
630,837 - B158DRAFT_0621 0.56 -0.0

Or see this region's nucleotide sequence