Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0243

Experiment: m.b. Bacitracin 1.5 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0242 and B158DRAFT_0243 are separated by 137 nucleotidesB158DRAFT_0243 and B158DRAFT_0244 are separated by 3 nucleotidesB158DRAFT_0244 and B158DRAFT_0245 are separated by 14 nucleotides B158DRAFT_0242: B158DRAFT_0242 - hypothetical protein, at 250,841 to 251,404 _0242 B158DRAFT_0243: B158DRAFT_0243 - haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E, at 251,542 to 252,207 _0243 B158DRAFT_0244: B158DRAFT_0244 - tyrosine recombinase XerC subunit, at 252,211 to 253,110 _0244 B158DRAFT_0245: B158DRAFT_0245 - Uncharacterized protein conserved in bacteria, at 253,125 to 253,802 _0245 Position (kb) 251 252 253Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 250.896 kb on + strandat 250.896 kb on + strandat 250.896 kb on + strandat 250.904 kb on - strand, within B158DRAFT_0242at 250.904 kb on - strand, within B158DRAFT_0242at 250.925 kb on - strand, within B158DRAFT_0242at 250.982 kb on - strand, within B158DRAFT_0242at 251.053 kb on - strand, within B158DRAFT_0242at 251.102 kb on + strand, within B158DRAFT_0242at 251.110 kb on - strand, within B158DRAFT_0242at 251.110 kb on - strand, within B158DRAFT_0242at 251.110 kb on - strand, within B158DRAFT_0242at 251.110 kb on - strand, within B158DRAFT_0242at 251.110 kb on - strand, within B158DRAFT_0242at 251.120 kb on - strand, within B158DRAFT_0242at 251.362 kb on + strandat 251.377 kb on - strandat 251.465 kb on - strandat 251.465 kb on - strandat 251.888 kb on + strand, within B158DRAFT_0243at 251.888 kb on + strand, within B158DRAFT_0243at 251.888 kb on + strand, within B158DRAFT_0243at 251.888 kb on + strand, within B158DRAFT_0243at 251.888 kb on + strand, within B158DRAFT_0243at 251.909 kb on + strand, within B158DRAFT_0243at 251.909 kb on + strand, within B158DRAFT_0243at 252.105 kb on - strand, within B158DRAFT_0243at 252.325 kb on + strand, within B158DRAFT_0244at 252.335 kb on + strand, within B158DRAFT_0244at 252.379 kb on - strand, within B158DRAFT_0244at 252.379 kb on - strand, within B158DRAFT_0244at 252.648 kb on + strand, within B158DRAFT_0244at 252.827 kb on - strand, within B158DRAFT_0244at 252.885 kb on - strand, within B158DRAFT_0244at 252.887 kb on + strand, within B158DRAFT_0244at 252.887 kb on + strand, within B158DRAFT_0244at 252.897 kb on + strand, within B158DRAFT_0244at 252.963 kb on - strand, within B158DRAFT_0244at 253.188 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml
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250,896 + -0.4
250,896 + -0.1
250,896 + -1.7
250,904 - B158DRAFT_0242 0.11 -0.3
250,904 - B158DRAFT_0242 0.11 -0.8
250,925 - B158DRAFT_0242 0.15 -0.2
250,982 - B158DRAFT_0242 0.25 -1.0
251,053 - B158DRAFT_0242 0.38 -0.8
251,102 + B158DRAFT_0242 0.46 -0.2
251,110 - B158DRAFT_0242 0.48 +1.1
251,110 - B158DRAFT_0242 0.48 -0.9
251,110 - B158DRAFT_0242 0.48 -0.8
251,110 - B158DRAFT_0242 0.48 +0.2
251,110 - B158DRAFT_0242 0.48 +0.7
251,120 - B158DRAFT_0242 0.49 -0.3
251,362 + -0.1
251,377 - +0.1
251,465 - +0.4
251,465 - -0.2
251,888 + B158DRAFT_0243 0.52 -2.2
251,888 + B158DRAFT_0243 0.52 -0.8
251,888 + B158DRAFT_0243 0.52 -3.3
251,888 + B158DRAFT_0243 0.52 -0.9
251,888 + B158DRAFT_0243 0.52 -1.2
251,909 + B158DRAFT_0243 0.55 -3.2
251,909 + B158DRAFT_0243 0.55 -2.5
252,105 - B158DRAFT_0243 0.85 -2.9
252,325 + B158DRAFT_0244 0.13 -4.9
252,335 + B158DRAFT_0244 0.14 -2.0
252,379 - B158DRAFT_0244 0.19 -1.7
252,379 - B158DRAFT_0244 0.19 -1.7
252,648 + B158DRAFT_0244 0.49 -1.0
252,827 - B158DRAFT_0244 0.68 -1.1
252,885 - B158DRAFT_0244 0.75 -0.7
252,887 + B158DRAFT_0244 0.75 -4.1
252,887 + B158DRAFT_0244 0.75 -2.4
252,897 + B158DRAFT_0244 0.76 -2.6
252,963 - B158DRAFT_0244 0.84 -0.9
253,188 + -2.3

Or see this region's nucleotide sequence