Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1959

Experiment: m.b. benzoic 0.2 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1957 and B158DRAFT_1958 are separated by 59 nucleotidesB158DRAFT_1958 and B158DRAFT_1959 are separated by 9 nucleotidesB158DRAFT_1959 and B158DRAFT_1960 are separated by 73 nucleotidesB158DRAFT_1960 and B158DRAFT_1961 overlap by 4 nucleotides B158DRAFT_1957: B158DRAFT_1957 - Adenylosuccinate synthetase (EC 6.3.4.4), at 93,423 to 94,724 _1957 B158DRAFT_1958: B158DRAFT_1958 - Protein of unknown function (DUF1653)., at 94,784 to 94,996 _1958 B158DRAFT_1959: B158DRAFT_1959 - Uncharacterized conserved protein, at 95,006 to 95,827 _1959 B158DRAFT_1960: B158DRAFT_1960 - hypothetical protein, at 95,901 to 96,569 _1960 B158DRAFT_1961: B158DRAFT_1961 - hypothetical protein, at 96,566 to 96,970 _1961 Position (kb) 95 96Strain fitness (log2 ratio) -2 -1 0 1 2at 94.741 kb on - strandat 94.830 kb on - strand, within B158DRAFT_1958at 94.862 kb on + strand, within B158DRAFT_1958at 94.862 kb on + strand, within B158DRAFT_1958at 94.868 kb on - strand, within B158DRAFT_1958at 94.919 kb on - strand, within B158DRAFT_1958at 94.927 kb on + strand, within B158DRAFT_1958at 95.044 kb on + strandat 95.072 kb on + strandat 95.103 kb on + strand, within B158DRAFT_1959at 95.114 kb on + strand, within B158DRAFT_1959at 95.125 kb on + strand, within B158DRAFT_1959at 95.133 kb on - strand, within B158DRAFT_1959at 95.133 kb on - strand, within B158DRAFT_1959at 95.194 kb on + strand, within B158DRAFT_1959at 95.194 kb on + strand, within B158DRAFT_1959at 95.202 kb on + strand, within B158DRAFT_1959at 95.210 kb on - strand, within B158DRAFT_1959at 95.210 kb on - strand, within B158DRAFT_1959at 95.210 kb on - strand, within B158DRAFT_1959at 95.347 kb on + strand, within B158DRAFT_1959at 95.355 kb on - strand, within B158DRAFT_1959at 95.362 kb on + strand, within B158DRAFT_1959at 95.362 kb on + strand, within B158DRAFT_1959at 95.377 kb on + strand, within B158DRAFT_1959at 95.385 kb on - strand, within B158DRAFT_1959at 95.385 kb on - strand, within B158DRAFT_1959at 95.385 kb on - strand, within B158DRAFT_1959at 95.437 kb on + strand, within B158DRAFT_1959at 95.453 kb on - strand, within B158DRAFT_1959at 95.638 kb on + strand, within B158DRAFT_1959at 95.646 kb on - strand, within B158DRAFT_1959at 95.646 kb on - strand, within B158DRAFT_1959at 95.683 kb on - strand, within B158DRAFT_1959at 95.715 kb on + strand, within B158DRAFT_1959at 95.726 kb on + strand, within B158DRAFT_1959at 95.805 kb on + strandat 95.831 kb on + strandat 95.873 kb on - strandat 95.988 kb on - strand, within B158DRAFT_1960at 96.034 kb on + strand, within B158DRAFT_1960at 96.040 kb on + strand, within B158DRAFT_1960at 96.062 kb on + strand, within B158DRAFT_1960at 96.062 kb on + strand, within B158DRAFT_1960at 96.068 kb on - strand, within B158DRAFT_1960at 96.096 kb on + strand, within B158DRAFT_1960at 96.158 kb on - strand, within B158DRAFT_1960at 96.158 kb on - strand, within B158DRAFT_1960at 96.370 kb on + strand, within B158DRAFT_1960at 96.514 kb on - strandat 96.647 kb on + strand, within B158DRAFT_1961at 96.677 kb on - strand, within B158DRAFT_1961at 96.765 kb on + strand, within B158DRAFT_1961at 96.785 kb on + strand, within B158DRAFT_1961

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. benzoic 0.2 mg/ml
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94,741 - +0.4
94,830 - B158DRAFT_1958 0.22 -0.7
94,862 + B158DRAFT_1958 0.37 +0.3
94,862 + B158DRAFT_1958 0.37 -0.6
94,868 - B158DRAFT_1958 0.39 -0.0
94,919 - B158DRAFT_1958 0.63 -0.4
94,927 + B158DRAFT_1958 0.67 +0.2
95,044 + +0.2
95,072 + -0.4
95,103 + B158DRAFT_1959 0.12 -0.1
95,114 + B158DRAFT_1959 0.13 +1.6
95,125 + B158DRAFT_1959 0.14 -2.3
95,133 - B158DRAFT_1959 0.15 -0.2
95,133 - B158DRAFT_1959 0.15 -0.8
95,194 + B158DRAFT_1959 0.23 -0.1
95,194 + B158DRAFT_1959 0.23 -0.1
95,202 + B158DRAFT_1959 0.24 -0.4
95,210 - B158DRAFT_1959 0.25 -0.2
95,210 - B158DRAFT_1959 0.25 -0.4
95,210 - B158DRAFT_1959 0.25 +0.5
95,347 + B158DRAFT_1959 0.41 +0.3
95,355 - B158DRAFT_1959 0.42 -0.3
95,362 + B158DRAFT_1959 0.43 +0.1
95,362 + B158DRAFT_1959 0.43 -0.1
95,377 + B158DRAFT_1959 0.45 -0.0
95,385 - B158DRAFT_1959 0.46 -0.0
95,385 - B158DRAFT_1959 0.46 +0.1
95,385 - B158DRAFT_1959 0.46 +0.3
95,437 + B158DRAFT_1959 0.52 -0.4
95,453 - B158DRAFT_1959 0.54 +0.3
95,638 + B158DRAFT_1959 0.77 -0.1
95,646 - B158DRAFT_1959 0.78 +0.4
95,646 - B158DRAFT_1959 0.78 +0.3
95,683 - B158DRAFT_1959 0.82 +0.4
95,715 + B158DRAFT_1959 0.86 +0.4
95,726 + B158DRAFT_1959 0.88 +1.9
95,805 + -0.2
95,831 + -0.0
95,873 - -0.1
95,988 - B158DRAFT_1960 0.13 +0.1
96,034 + B158DRAFT_1960 0.20 -0.2
96,040 + B158DRAFT_1960 0.21 +0.2
96,062 + B158DRAFT_1960 0.24 +0.2
96,062 + B158DRAFT_1960 0.24 -0.8
96,068 - B158DRAFT_1960 0.25 -0.2
96,096 + B158DRAFT_1960 0.29 +0.2
96,158 - B158DRAFT_1960 0.38 +0.3
96,158 - B158DRAFT_1960 0.38 -1.8
96,370 + B158DRAFT_1960 0.70 -0.5
96,514 - -0.3
96,647 + B158DRAFT_1961 0.20 -1.1
96,677 - B158DRAFT_1961 0.27 -1.0
96,765 + B158DRAFT_1961 0.49 -0.3
96,785 + B158DRAFT_1961 0.54 -0.3

Or see this region's nucleotide sequence