Experiment: m.b. benzoic 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1701 and B158DRAFT_1702 are separated by 20 nucleotides B158DRAFT_1702 and B158DRAFT_1703 are separated by 20 nucleotides B158DRAFT_1703 and B158DRAFT_1704 overlap by 8 nucleotides B158DRAFT_1704 and B158DRAFT_1705 are separated by 67 nucleotides
B158DRAFT_1701: B158DRAFT_1701 - hypothetical protein, at 1,777,414 to 1,778,196
_1701
B158DRAFT_1702: B158DRAFT_1702 - probable methyltransferase, at 1,778,217 to 1,779,164
_1702
B158DRAFT_1703: B158DRAFT_1703 - TIGR03440 family protein, at 1,779,185 to 1,780,522
_1703
B158DRAFT_1704: B158DRAFT_1704 - Predicted epimerase, PhzC/PhzF homolog, at 1,780,515 to 1,781,354
_1704
B158DRAFT_1705: B158DRAFT_1705 - amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3), at 1,781,422 to 1,782,747
_1705
Position (kb)
1779
1780
1781 Strain fitness (log2 ratio)
-1
0
1 at 1778.223 kb on - strand at 1778.320 kb on + strand, within B158DRAFT_1702 at 1778.320 kb on + strand, within B158DRAFT_1702 at 1778.328 kb on - strand, within B158DRAFT_1702 at 1778.419 kb on - strand, within B158DRAFT_1702 at 1778.536 kb on + strand, within B158DRAFT_1702 at 1778.543 kb on + strand, within B158DRAFT_1702 at 1778.551 kb on + strand, within B158DRAFT_1702 at 1778.551 kb on + strand, within B158DRAFT_1702 at 1778.551 kb on + strand, within B158DRAFT_1702 at 1778.568 kb on + strand, within B158DRAFT_1702 at 1778.576 kb on - strand, within B158DRAFT_1702 at 1778.710 kb on + strand, within B158DRAFT_1702 at 1778.718 kb on - strand, within B158DRAFT_1702 at 1778.787 kb on - strand, within B158DRAFT_1702 at 1778.799 kb on - strand, within B158DRAFT_1702 at 1778.856 kb on + strand, within B158DRAFT_1702 at 1778.864 kb on - strand, within B158DRAFT_1702 at 1778.970 kb on + strand, within B158DRAFT_1702 at 1778.978 kb on - strand, within B158DRAFT_1702 at 1779.050 kb on + strand, within B158DRAFT_1702 at 1779.050 kb on + strand, within B158DRAFT_1702 at 1779.268 kb on + strand at 1779.291 kb on - strand at 1779.302 kb on - strand at 1779.365 kb on + strand, within B158DRAFT_1703 at 1779.406 kb on - strand, within B158DRAFT_1703 at 1779.462 kb on + strand, within B158DRAFT_1703 at 1779.470 kb on - strand, within B158DRAFT_1703 at 1779.491 kb on + strand, within B158DRAFT_1703 at 1779.499 kb on - strand, within B158DRAFT_1703 at 1779.501 kb on + strand, within B158DRAFT_1703 at 1779.630 kb on + strand, within B158DRAFT_1703 at 1779.651 kb on - strand, within B158DRAFT_1703 at 1779.728 kb on + strand, within B158DRAFT_1703 at 1779.751 kb on - strand, within B158DRAFT_1703 at 1779.833 kb on - strand, within B158DRAFT_1703 at 1779.970 kb on - strand, within B158DRAFT_1703 at 1780.049 kb on - strand, within B158DRAFT_1703 at 1780.051 kb on + strand, within B158DRAFT_1703 at 1780.051 kb on + strand, within B158DRAFT_1703 at 1780.220 kb on + strand, within B158DRAFT_1703 at 1780.220 kb on + strand, within B158DRAFT_1703 at 1780.228 kb on - strand, within B158DRAFT_1703 at 1780.228 kb on - strand, within B158DRAFT_1703 at 1780.228 kb on - strand, within B158DRAFT_1703 at 1780.263 kb on + strand, within B158DRAFT_1703 at 1780.271 kb on - strand, within B158DRAFT_1703 at 1780.324 kb on + strand, within B158DRAFT_1703 at 1780.413 kb on + strand at 1780.485 kb on - strand at 1780.503 kb on + strand at 1780.503 kb on - strand at 1780.511 kb on - strand at 1780.511 kb on - strand at 1780.524 kb on + strand at 1780.524 kb on + strand at 1780.525 kb on + strand at 1780.525 kb on + strand at 1780.525 kb on + strand at 1780.550 kb on + strand at 1780.575 kb on - strand at 1780.615 kb on + strand, within B158DRAFT_1704 at 1780.671 kb on + strand, within B158DRAFT_1704 at 1780.699 kb on + strand, within B158DRAFT_1704 at 1780.707 kb on - strand, within B158DRAFT_1704 at 1780.707 kb on - strand, within B158DRAFT_1704 at 1780.709 kb on + strand, within B158DRAFT_1704 at 1780.717 kb on - strand, within B158DRAFT_1704 at 1780.849 kb on - strand, within B158DRAFT_1704 at 1780.857 kb on - strand, within B158DRAFT_1704 at 1780.876 kb on + strand, within B158DRAFT_1704 at 1780.876 kb on + strand, within B158DRAFT_1704 at 1780.884 kb on - strand, within B158DRAFT_1704 at 1780.884 kb on - strand, within B158DRAFT_1704 at 1781.060 kb on + strand, within B158DRAFT_1704 at 1781.060 kb on + strand, within B158DRAFT_1704 at 1781.153 kb on + strand, within B158DRAFT_1704 at 1781.174 kb on - strand, within B158DRAFT_1704 at 1781.174 kb on - strand, within B158DRAFT_1704 at 1781.211 kb on - strand, within B158DRAFT_1704 at 1781.213 kb on + strand, within B158DRAFT_1704 at 1781.215 kb on + strand, within B158DRAFT_1704 at 1781.223 kb on - strand, within B158DRAFT_1704 at 1781.223 kb on - strand, within B158DRAFT_1704 at 1781.223 kb on - strand, within B158DRAFT_1704 at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.281 kb on + strand at 1781.289 kb on - strand at 1781.289 kb on - strand at 1781.289 kb on - strand at 1781.289 kb on - strand at 1781.289 kb on - strand at 1781.289 kb on - strand at 1781.289 kb on - strand at 1781.289 kb on - strand at 1781.289 kb on - strand at 1781.289 kb on - strand at 1781.305 kb on + strand at 1781.350 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.2 mg/ml remove 1,778,223 - -0.2 1,778,320 + B158DRAFT_1702 0.11 +0.1 1,778,320 + B158DRAFT_1702 0.11 -1.0 1,778,328 - B158DRAFT_1702 0.12 +0.0 1,778,419 - B158DRAFT_1702 0.21 -0.1 1,778,536 + B158DRAFT_1702 0.34 +0.3 1,778,543 + B158DRAFT_1702 0.34 +0.5 1,778,551 + B158DRAFT_1702 0.35 -0.2 1,778,551 + B158DRAFT_1702 0.35 -0.8 1,778,551 + B158DRAFT_1702 0.35 +0.3 1,778,568 + B158DRAFT_1702 0.37 -0.0 1,778,576 - B158DRAFT_1702 0.38 -0.5 1,778,710 + B158DRAFT_1702 0.52 -0.4 1,778,718 - B158DRAFT_1702 0.53 -0.6 1,778,787 - B158DRAFT_1702 0.60 +0.0 1,778,799 - B158DRAFT_1702 0.61 +0.5 1,778,856 + B158DRAFT_1702 0.67 -0.1 1,778,864 - B158DRAFT_1702 0.68 -0.1 1,778,970 + B158DRAFT_1702 0.79 -0.2 1,778,978 - B158DRAFT_1702 0.80 +0.0 1,779,050 + B158DRAFT_1702 0.88 +0.1 1,779,050 + B158DRAFT_1702 0.88 -0.2 1,779,268 + +0.6 1,779,291 - +0.3 1,779,302 - +0.2 1,779,365 + B158DRAFT_1703 0.13 +0.9 1,779,406 - B158DRAFT_1703 0.17 +0.2 1,779,462 + B158DRAFT_1703 0.21 +0.6 1,779,470 - B158DRAFT_1703 0.21 -0.7 1,779,491 + B158DRAFT_1703 0.23 -0.7 1,779,499 - B158DRAFT_1703 0.23 +0.4 1,779,501 + B158DRAFT_1703 0.24 +0.3 1,779,630 + B158DRAFT_1703 0.33 +0.4 1,779,651 - B158DRAFT_1703 0.35 +0.0 1,779,728 + B158DRAFT_1703 0.41 -0.4 1,779,751 - B158DRAFT_1703 0.42 +0.0 1,779,833 - B158DRAFT_1703 0.48 -0.0 1,779,970 - B158DRAFT_1703 0.59 +0.6 1,780,049 - B158DRAFT_1703 0.65 +1.5 1,780,051 + B158DRAFT_1703 0.65 -0.6 1,780,051 + B158DRAFT_1703 0.65 -0.4 1,780,220 + B158DRAFT_1703 0.77 +1.0 1,780,220 + B158DRAFT_1703 0.77 +0.0 1,780,228 - B158DRAFT_1703 0.78 -0.2 1,780,228 - B158DRAFT_1703 0.78 -0.6 1,780,228 - B158DRAFT_1703 0.78 -0.2 1,780,263 + B158DRAFT_1703 0.81 -0.1 1,780,271 - B158DRAFT_1703 0.81 +0.6 1,780,324 + B158DRAFT_1703 0.85 +0.1 1,780,413 + +0.1 1,780,485 - -0.4 1,780,503 + -0.6 1,780,503 - +0.6 1,780,511 - +0.3 1,780,511 - +0.2 1,780,524 + -0.2 1,780,524 + -0.4 1,780,525 + -0.1 1,780,525 + -0.4 1,780,525 + -0.1 1,780,550 + -0.1 1,780,575 - -0.2 1,780,615 + B158DRAFT_1704 0.12 +0.9 1,780,671 + B158DRAFT_1704 0.19 -0.2 1,780,699 + B158DRAFT_1704 0.22 +0.4 1,780,707 - B158DRAFT_1704 0.23 +0.0 1,780,707 - B158DRAFT_1704 0.23 -1.0 1,780,709 + B158DRAFT_1704 0.23 -0.6 1,780,717 - B158DRAFT_1704 0.24 +0.1 1,780,849 - B158DRAFT_1704 0.40 -0.3 1,780,857 - B158DRAFT_1704 0.41 -0.5 1,780,876 + B158DRAFT_1704 0.43 -0.4 1,780,876 + B158DRAFT_1704 0.43 -0.4 1,780,884 - B158DRAFT_1704 0.44 -1.1 1,780,884 - B158DRAFT_1704 0.44 +0.4 1,781,060 + B158DRAFT_1704 0.65 -0.3 1,781,060 + B158DRAFT_1704 0.65 -0.2 1,781,153 + B158DRAFT_1704 0.76 -0.7 1,781,174 - B158DRAFT_1704 0.78 +0.5 1,781,174 - B158DRAFT_1704 0.78 +0.6 1,781,211 - B158DRAFT_1704 0.83 +0.5 1,781,213 + B158DRAFT_1704 0.83 -0.1 1,781,215 + B158DRAFT_1704 0.83 -0.3 1,781,223 - B158DRAFT_1704 0.84 +0.1 1,781,223 - B158DRAFT_1704 0.84 -0.2 1,781,223 - B158DRAFT_1704 0.84 +0.1 1,781,281 + +0.3 1,781,281 + +0.1 1,781,281 + -0.2 1,781,281 + +0.6 1,781,281 + -0.1 1,781,281 + +0.1 1,781,281 + +0.0 1,781,281 + +0.0 1,781,281 + +0.2 1,781,281 + +0.3 1,781,281 + -0.4 1,781,289 - -0.7 1,781,289 - +0.0 1,781,289 - +1.1 1,781,289 - +0.6 1,781,289 - -0.1 1,781,289 - +0.1 1,781,289 - +0.4 1,781,289 - -0.8 1,781,289 - +0.2 1,781,289 - +1.0 1,781,305 + -0.2 1,781,350 + -0.2
Or see this region's nucleotide sequence