Experiment: m.b. benzoic 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1512 and B158DRAFT_1513 are separated by 7 nucleotides B158DRAFT_1513 and B158DRAFT_1514 are separated by 165 nucleotides B158DRAFT_1514 and B158DRAFT_1515 overlap by 1 nucleotides B158DRAFT_1515 and B158DRAFT_1516 are separated by 16 nucleotides B158DRAFT_1516 and B158DRAFT_1517 are separated by 114 nucleotides
B158DRAFT_1512: B158DRAFT_1512 - Protein of unknown function (DUF2489)., at 1,566,697 to 1,567,170
_1512
B158DRAFT_1513: B158DRAFT_1513 - tRNA_Arg_CCG, at 1,567,178 to 1,567,254
_1513
B158DRAFT_1514: B158DRAFT_1514 - Pseudouridylate synthases, 23S RNA-specific, at 1,567,420 to 1,568,088
_1514
B158DRAFT_1515: B158DRAFT_1515 - methyltransferase, putative, at 1,568,088 to 1,569,089
_1515
B158DRAFT_1516: B158DRAFT_1516 - methyltransferase, putative, at 1,569,106 to 1,569,834
_1516
B158DRAFT_1517: B158DRAFT_1517 - chorismate mutase (EC 5.4.99.5), at 1,569,949 to 1,570,215
_1517
Position (kb)
1568
1569
1570 Strain fitness (log2 ratio)
-2
-1
0
1 at 1567.091 kb on - strand, within B158DRAFT_1512 at 1567.114 kb on - strand, within B158DRAFT_1512 at 1567.140 kb on + strand at 1567.148 kb on + strand at 1567.293 kb on - strand at 1567.305 kb on + strand at 1567.313 kb on - strand at 1567.358 kb on - strand at 1567.358 kb on - strand at 1567.372 kb on + strand at 1567.452 kb on - strand at 1567.475 kb on - strand at 1567.477 kb on + strand at 1567.482 kb on + strand at 1567.482 kb on + strand at 1567.482 kb on + strand at 1567.482 kb on + strand at 1567.490 kb on + strand, within B158DRAFT_1514 at 1567.490 kb on - strand, within B158DRAFT_1514 at 1567.490 kb on - strand, within B158DRAFT_1514 at 1567.490 kb on - strand, within B158DRAFT_1514 at 1567.562 kb on - strand, within B158DRAFT_1514 at 1567.562 kb on - strand, within B158DRAFT_1514 at 1567.562 kb on - strand, within B158DRAFT_1514 at 1567.562 kb on - strand, within B158DRAFT_1514 at 1567.562 kb on - strand, within B158DRAFT_1514 at 1567.569 kb on + strand, within B158DRAFT_1514 at 1567.572 kb on - strand, within B158DRAFT_1514 at 1567.572 kb on - strand, within B158DRAFT_1514 at 1567.598 kb on - strand, within B158DRAFT_1514 at 1567.626 kb on + strand, within B158DRAFT_1514 at 1567.723 kb on - strand, within B158DRAFT_1514 at 1567.793 kb on + strand, within B158DRAFT_1514 at 1567.793 kb on + strand, within B158DRAFT_1514 at 1567.798 kb on + strand, within B158DRAFT_1514 at 1567.798 kb on + strand, within B158DRAFT_1514 at 1567.803 kb on - strand, within B158DRAFT_1514 at 1567.835 kb on - strand, within B158DRAFT_1514 at 1567.916 kb on + strand, within B158DRAFT_1514 at 1567.916 kb on + strand, within B158DRAFT_1514 at 1567.916 kb on + strand, within B158DRAFT_1514 at 1567.924 kb on - strand, within B158DRAFT_1514 at 1567.924 kb on - strand, within B158DRAFT_1514 at 1567.990 kb on + strand, within B158DRAFT_1514 at 1568.051 kb on + strand at 1568.052 kb on + strand at 1568.052 kb on + strand at 1568.070 kb on - strand at 1568.142 kb on + strand at 1568.152 kb on + strand at 1568.166 kb on + strand at 1568.174 kb on - strand at 1568.230 kb on - strand, within B158DRAFT_1515 at 1568.243 kb on - strand, within B158DRAFT_1515 at 1568.254 kb on - strand, within B158DRAFT_1515 at 1568.302 kb on - strand, within B158DRAFT_1515 at 1568.327 kb on + strand, within B158DRAFT_1515 at 1568.335 kb on - strand, within B158DRAFT_1515 at 1568.525 kb on - strand, within B158DRAFT_1515 at 1568.554 kb on - strand, within B158DRAFT_1515 at 1568.565 kb on + strand, within B158DRAFT_1515 at 1568.633 kb on + strand, within B158DRAFT_1515 at 1568.633 kb on + strand, within B158DRAFT_1515 at 1568.641 kb on - strand, within B158DRAFT_1515 at 1568.641 kb on - strand, within B158DRAFT_1515 at 1568.668 kb on + strand, within B158DRAFT_1515 at 1568.729 kb on - strand, within B158DRAFT_1515 at 1568.744 kb on + strand, within B158DRAFT_1515 at 1568.782 kb on + strand, within B158DRAFT_1515 at 1568.783 kb on - strand, within B158DRAFT_1515 at 1568.790 kb on - strand, within B158DRAFT_1515 at 1568.823 kb on - strand, within B158DRAFT_1515 at 1568.948 kb on + strand, within B158DRAFT_1515 at 1568.955 kb on - strand, within B158DRAFT_1515 at 1568.955 kb on - strand, within B158DRAFT_1515 at 1568.957 kb on + strand, within B158DRAFT_1515 at 1568.957 kb on + strand, within B158DRAFT_1515 at 1568.957 kb on + strand, within B158DRAFT_1515 at 1568.957 kb on + strand, within B158DRAFT_1515 at 1568.957 kb on + strand, within B158DRAFT_1515 at 1568.957 kb on + strand, within B158DRAFT_1515 at 1568.957 kb on + strand, within B158DRAFT_1515 at 1568.965 kb on - strand, within B158DRAFT_1515 at 1568.965 kb on - strand, within B158DRAFT_1515 at 1568.965 kb on - strand, within B158DRAFT_1515 at 1568.965 kb on - strand, within B158DRAFT_1515 at 1568.965 kb on - strand, within B158DRAFT_1515 at 1568.965 kb on - strand, within B158DRAFT_1515 at 1568.965 kb on - strand, within B158DRAFT_1515 at 1568.965 kb on - strand, within B158DRAFT_1515 at 1568.965 kb on - strand, within B158DRAFT_1515 at 1568.995 kb on + strand at 1569.013 kb on - strand at 1569.051 kb on + strand at 1569.062 kb on + strand at 1569.069 kb on - strand at 1569.163 kb on + strand at 1569.163 kb on + strand at 1569.309 kb on - strand, within B158DRAFT_1516 at 1569.351 kb on + strand, within B158DRAFT_1516 at 1569.466 kb on + strand, within B158DRAFT_1516 at 1569.498 kb on + strand, within B158DRAFT_1516 at 1569.546 kb on + strand, within B158DRAFT_1516 at 1569.553 kb on - strand, within B158DRAFT_1516 at 1569.625 kb on - strand, within B158DRAFT_1516 at 1569.625 kb on - strand, within B158DRAFT_1516 at 1569.625 kb on - strand, within B158DRAFT_1516 at 1569.632 kb on - strand, within B158DRAFT_1516 at 1569.667 kb on - strand, within B158DRAFT_1516 at 1569.667 kb on - strand, within B158DRAFT_1516 at 1569.672 kb on + strand, within B158DRAFT_1516 at 1569.721 kb on + strand, within B158DRAFT_1516 at 1569.729 kb on - strand, within B158DRAFT_1516 at 1569.729 kb on - strand, within B158DRAFT_1516 at 1569.784 kb on - strand at 1569.794 kb on + strand at 1569.794 kb on + strand at 1569.830 kb on + strand at 1569.830 kb on + strand at 1569.846 kb on - strand at 1569.936 kb on + strand at 1569.937 kb on + strand at 1569.964 kb on + strand at 1570.015 kb on - strand, within B158DRAFT_1517 at 1570.071 kb on + strand, within B158DRAFT_1517 at 1570.071 kb on + strand, within B158DRAFT_1517 at 1570.071 kb on + strand, within B158DRAFT_1517 at 1570.079 kb on - strand, within B158DRAFT_1517 at 1570.079 kb on - strand, within B158DRAFT_1517 at 1570.079 kb on - strand, within B158DRAFT_1517 at 1570.081 kb on + strand, within B158DRAFT_1517 at 1570.081 kb on + strand, within B158DRAFT_1517 at 1570.081 kb on - strand, within B158DRAFT_1517 at 1570.083 kb on + strand, within B158DRAFT_1517 at 1570.089 kb on + strand, within B158DRAFT_1517 at 1570.089 kb on + strand, within B158DRAFT_1517 at 1570.089 kb on + strand, within B158DRAFT_1517 at 1570.089 kb on - strand, within B158DRAFT_1517 at 1570.089 kb on - strand, within B158DRAFT_1517
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.2 mg/ml remove 1,567,091 - B158DRAFT_1512 0.83 +0.5 1,567,114 - B158DRAFT_1512 0.88 -0.1 1,567,140 + -0.2 1,567,148 + +0.2 1,567,293 - -0.3 1,567,305 + -2.1 1,567,313 - -0.1 1,567,358 - +0.1 1,567,358 - -0.7 1,567,372 + -0.1 1,567,452 - +0.1 1,567,475 - +0.1 1,567,477 + +0.0 1,567,482 + -0.2 1,567,482 + -0.4 1,567,482 + +0.1 1,567,482 + +0.3 1,567,490 + B158DRAFT_1514 0.10 +0.2 1,567,490 - B158DRAFT_1514 0.10 +0.2 1,567,490 - B158DRAFT_1514 0.10 +0.2 1,567,490 - B158DRAFT_1514 0.10 -0.6 1,567,562 - B158DRAFT_1514 0.21 +0.4 1,567,562 - B158DRAFT_1514 0.21 +0.3 1,567,562 - B158DRAFT_1514 0.21 +0.5 1,567,562 - B158DRAFT_1514 0.21 -0.2 1,567,562 - B158DRAFT_1514 0.21 -1.5 1,567,569 + B158DRAFT_1514 0.22 +0.1 1,567,572 - B158DRAFT_1514 0.23 -0.2 1,567,572 - B158DRAFT_1514 0.23 -0.5 1,567,598 - B158DRAFT_1514 0.27 -0.1 1,567,626 + B158DRAFT_1514 0.31 -0.4 1,567,723 - B158DRAFT_1514 0.45 -0.3 1,567,793 + B158DRAFT_1514 0.56 +0.1 1,567,793 + B158DRAFT_1514 0.56 -0.3 1,567,798 + B158DRAFT_1514 0.57 +1.2 1,567,798 + B158DRAFT_1514 0.57 -0.6 1,567,803 - B158DRAFT_1514 0.57 -0.3 1,567,835 - B158DRAFT_1514 0.62 -0.1 1,567,916 + B158DRAFT_1514 0.74 -0.4 1,567,916 + B158DRAFT_1514 0.74 -0.5 1,567,916 + B158DRAFT_1514 0.74 -0.1 1,567,924 - B158DRAFT_1514 0.75 -0.4 1,567,924 - B158DRAFT_1514 0.75 -0.5 1,567,990 + B158DRAFT_1514 0.85 +0.0 1,568,051 + -0.7 1,568,052 + -0.8 1,568,052 + +0.1 1,568,070 - +0.2 1,568,142 + -1.1 1,568,152 + -0.6 1,568,166 + -0.3 1,568,174 - +0.1 1,568,230 - B158DRAFT_1515 0.14 -0.6 1,568,243 - B158DRAFT_1515 0.15 -0.3 1,568,254 - B158DRAFT_1515 0.17 -0.5 1,568,302 - B158DRAFT_1515 0.21 -0.2 1,568,327 + B158DRAFT_1515 0.24 -0.7 1,568,335 - B158DRAFT_1515 0.25 +0.7 1,568,525 - B158DRAFT_1515 0.44 -0.5 1,568,554 - B158DRAFT_1515 0.47 -0.4 1,568,565 + B158DRAFT_1515 0.48 -0.3 1,568,633 + B158DRAFT_1515 0.54 -0.4 1,568,633 + B158DRAFT_1515 0.54 +0.2 1,568,641 - B158DRAFT_1515 0.55 -0.3 1,568,641 - B158DRAFT_1515 0.55 -0.0 1,568,668 + B158DRAFT_1515 0.58 +0.1 1,568,729 - B158DRAFT_1515 0.64 +0.5 1,568,744 + B158DRAFT_1515 0.65 -0.2 1,568,782 + B158DRAFT_1515 0.69 -0.4 1,568,783 - B158DRAFT_1515 0.69 -1.1 1,568,790 - B158DRAFT_1515 0.70 -0.7 1,568,823 - B158DRAFT_1515 0.73 -0.9 1,568,948 + B158DRAFT_1515 0.86 -0.6 1,568,955 - B158DRAFT_1515 0.87 -0.5 1,568,955 - B158DRAFT_1515 0.87 -0.2 1,568,957 + B158DRAFT_1515 0.87 -0.5 1,568,957 + B158DRAFT_1515 0.87 +0.1 1,568,957 + B158DRAFT_1515 0.87 -0.1 1,568,957 + B158DRAFT_1515 0.87 -0.9 1,568,957 + B158DRAFT_1515 0.87 -0.4 1,568,957 + B158DRAFT_1515 0.87 -1.3 1,568,957 + B158DRAFT_1515 0.87 +0.7 1,568,965 - B158DRAFT_1515 0.88 -0.3 1,568,965 - B158DRAFT_1515 0.88 -1.0 1,568,965 - B158DRAFT_1515 0.88 -0.4 1,568,965 - B158DRAFT_1515 0.88 -1.8 1,568,965 - B158DRAFT_1515 0.88 +0.1 1,568,965 - B158DRAFT_1515 0.88 -1.2 1,568,965 - B158DRAFT_1515 0.88 -0.4 1,568,965 - B158DRAFT_1515 0.88 -0.5 1,568,965 - B158DRAFT_1515 0.88 -0.5 1,568,995 + -0.3 1,569,013 - -0.8 1,569,051 + -0.4 1,569,062 + +0.8 1,569,069 - +0.6 1,569,163 + -0.3 1,569,163 + -0.6 1,569,309 - B158DRAFT_1516 0.28 +1.6 1,569,351 + B158DRAFT_1516 0.34 -1.1 1,569,466 + B158DRAFT_1516 0.49 -0.8 1,569,498 + B158DRAFT_1516 0.54 -0.3 1,569,546 + B158DRAFT_1516 0.60 -0.0 1,569,553 - B158DRAFT_1516 0.61 -0.0 1,569,625 - B158DRAFT_1516 0.71 -0.3 1,569,625 - B158DRAFT_1516 0.71 +0.5 1,569,625 - B158DRAFT_1516 0.71 -0.6 1,569,632 - B158DRAFT_1516 0.72 -0.3 1,569,667 - B158DRAFT_1516 0.77 -0.4 1,569,667 - B158DRAFT_1516 0.77 -0.4 1,569,672 + B158DRAFT_1516 0.78 -0.5 1,569,721 + B158DRAFT_1516 0.84 +0.3 1,569,729 - B158DRAFT_1516 0.85 -0.5 1,569,729 - B158DRAFT_1516 0.85 -0.3 1,569,784 - -0.4 1,569,794 + +1.0 1,569,794 + +0.0 1,569,830 + -0.3 1,569,830 + -0.1 1,569,846 - +0.3 1,569,936 + -0.2 1,569,937 + -0.2 1,569,964 + -0.6 1,570,015 - B158DRAFT_1517 0.25 +0.0 1,570,071 + B158DRAFT_1517 0.46 -0.3 1,570,071 + B158DRAFT_1517 0.46 +0.3 1,570,071 + B158DRAFT_1517 0.46 +0.1 1,570,079 - B158DRAFT_1517 0.49 -0.9 1,570,079 - B158DRAFT_1517 0.49 +0.9 1,570,079 - B158DRAFT_1517 0.49 -0.1 1,570,081 + B158DRAFT_1517 0.49 -1.1 1,570,081 + B158DRAFT_1517 0.49 -0.2 1,570,081 - B158DRAFT_1517 0.49 -0.5 1,570,083 + B158DRAFT_1517 0.50 +0.8 1,570,089 + B158DRAFT_1517 0.52 -0.3 1,570,089 + B158DRAFT_1517 0.52 -0.3 1,570,089 + B158DRAFT_1517 0.52 -1.7 1,570,089 - B158DRAFT_1517 0.52 -0.3 1,570,089 - B158DRAFT_1517 0.52 -1.9
Or see this region's nucleotide sequence