Experiment: m.b. benzoic 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0856 and B158DRAFT_0857 are separated by 144 nucleotides B158DRAFT_0857 and B158DRAFT_0858 are separated by 169 nucleotides B158DRAFT_0858 and B158DRAFT_0859 overlap by 4 nucleotides
B158DRAFT_0856: B158DRAFT_0856 - hypothetical protein, at 875,421 to 875,960
_0856
B158DRAFT_0857: B158DRAFT_0857 - Acetyltransferase (GNAT) family., at 876,105 to 876,578
_0857
B158DRAFT_0858: B158DRAFT_0858 - Na+/H+ antiporter, at 876,748 to 878,130
_0858
B158DRAFT_0859: B158DRAFT_0859 - putative efflux protein, MATE family, at 878,127 to 879,455
_0859
Position (kb) 876
877
878
879 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 875.780 kb on + strand, within B158DRAFT_0856 at 875.780 kb on + strand, within B158DRAFT_0856 at 875.788 kb on - strand, within B158DRAFT_0856 at 875.818 kb on - strand, within B158DRAFT_0856 at 875.846 kb on + strand, within B158DRAFT_0856 at 875.846 kb on + strand, within B158DRAFT_0856 at 875.851 kb on + strand, within B158DRAFT_0856 at 875.854 kb on - strand, within B158DRAFT_0856 at 875.854 kb on - strand, within B158DRAFT_0856 at 875.854 kb on - strand, within B158DRAFT_0856 at 875.854 kb on - strand, within B158DRAFT_0856 at 875.856 kb on - strand, within B158DRAFT_0856 at 875.918 kb on + strand at 875.918 kb on + strand at 875.918 kb on + strand at 875.921 kb on - strand at 875.926 kb on + strand at 875.926 kb on - strand at 875.934 kb on - strand at 875.934 kb on - strand at 875.934 kb on - strand at 875.934 kb on - strand at 875.936 kb on + strand at 875.936 kb on + strand at 875.936 kb on + strand at 875.936 kb on + strand at 875.944 kb on - strand at 875.944 kb on - strand at 875.944 kb on - strand at 875.944 kb on - strand at 875.944 kb on - strand at 875.989 kb on - strand at 876.010 kb on + strand at 876.018 kb on - strand at 876.151 kb on - strand at 876.151 kb on - strand at 876.151 kb on - strand at 876.153 kb on + strand, within B158DRAFT_0857 at 876.178 kb on + strand, within B158DRAFT_0857 at 876.187 kb on + strand, within B158DRAFT_0857 at 876.187 kb on + strand, within B158DRAFT_0857 at 876.276 kb on - strand, within B158DRAFT_0857 at 876.276 kb on - strand, within B158DRAFT_0857 at 876.291 kb on - strand, within B158DRAFT_0857 at 876.293 kb on + strand, within B158DRAFT_0857 at 876.293 kb on + strand, within B158DRAFT_0857 at 876.293 kb on + strand, within B158DRAFT_0857 at 876.293 kb on + strand, within B158DRAFT_0857 at 876.293 kb on + strand, within B158DRAFT_0857 at 876.301 kb on - strand, within B158DRAFT_0857 at 876.301 kb on - strand, within B158DRAFT_0857 at 876.301 kb on - strand, within B158DRAFT_0857 at 876.301 kb on - strand, within B158DRAFT_0857 at 876.301 kb on - strand, within B158DRAFT_0857 at 876.301 kb on - strand, within B158DRAFT_0857 at 876.301 kb on - strand, within B158DRAFT_0857 at 876.312 kb on + strand, within B158DRAFT_0857 at 876.313 kb on + strand, within B158DRAFT_0857 at 876.321 kb on - strand, within B158DRAFT_0857 at 876.321 kb on - strand, within B158DRAFT_0857 at 876.384 kb on + strand, within B158DRAFT_0857 at 876.419 kb on - strand, within B158DRAFT_0857 at 876.447 kb on - strand, within B158DRAFT_0857 at 876.454 kb on + strand, within B158DRAFT_0857 at 876.454 kb on + strand, within B158DRAFT_0857 at 876.454 kb on + strand, within B158DRAFT_0857 at 876.455 kb on - strand, within B158DRAFT_0857 at 876.462 kb on - strand, within B158DRAFT_0857 at 876.462 kb on - strand, within B158DRAFT_0857 at 876.462 kb on - strand, within B158DRAFT_0857 at 876.464 kb on + strand, within B158DRAFT_0857 at 876.482 kb on + strand, within B158DRAFT_0857 at 876.530 kb on - strand, within B158DRAFT_0857 at 876.546 kb on + strand at 876.546 kb on + strand at 876.638 kb on + strand at 876.638 kb on + strand at 876.646 kb on - strand at 876.648 kb on + strand at 876.653 kb on + strand at 876.653 kb on + strand at 876.653 kb on + strand at 876.653 kb on + strand at 876.653 kb on + strand at 876.653 kb on + strand at 876.653 kb on + strand at 876.653 kb on + strand at 876.661 kb on - strand at 876.661 kb on - strand at 876.661 kb on - strand at 876.661 kb on - strand at 876.661 kb on - strand at 876.661 kb on - strand at 876.661 kb on - strand at 876.661 kb on - strand at 876.661 kb on - strand at 876.671 kb on - strand at 876.780 kb on + strand at 876.821 kb on + strand at 876.821 kb on + strand at 876.821 kb on + strand at 876.821 kb on + strand at 876.821 kb on + strand at 876.821 kb on + strand at 876.829 kb on - strand at 876.829 kb on - strand at 876.829 kb on - strand at 876.829 kb on - strand at 876.829 kb on - strand at 876.829 kb on - strand at 876.829 kb on - strand at 876.829 kb on - strand at 876.847 kb on + strand at 876.907 kb on - strand, within B158DRAFT_0858 at 877.051 kb on - strand, within B158DRAFT_0858 at 877.061 kb on - strand, within B158DRAFT_0858 at 877.145 kb on + strand, within B158DRAFT_0858 at 877.145 kb on + strand, within B158DRAFT_0858 at 877.145 kb on + strand, within B158DRAFT_0858 at 877.148 kb on - strand, within B158DRAFT_0858 at 877.153 kb on - strand, within B158DRAFT_0858 at 877.153 kb on - strand, within B158DRAFT_0858 at 877.153 kb on - strand, within B158DRAFT_0858 at 877.154 kb on - strand, within B158DRAFT_0858 at 877.172 kb on + strand, within B158DRAFT_0858 at 877.219 kb on + strand, within B158DRAFT_0858 at 877.233 kb on + strand, within B158DRAFT_0858 at 877.275 kb on + strand, within B158DRAFT_0858 at 877.298 kb on - strand, within B158DRAFT_0858 at 877.298 kb on - strand, within B158DRAFT_0858 at 877.298 kb on - strand, within B158DRAFT_0858 at 877.340 kb on + strand, within B158DRAFT_0858 at 877.394 kb on + strand, within B158DRAFT_0858 at 877.484 kb on - strand, within B158DRAFT_0858 at 877.484 kb on - strand, within B158DRAFT_0858 at 877.486 kb on - strand, within B158DRAFT_0858 at 877.491 kb on + strand, within B158DRAFT_0858 at 877.528 kb on - strand, within B158DRAFT_0858 at 877.616 kb on + strand, within B158DRAFT_0858 at 877.616 kb on + strand, within B158DRAFT_0858 at 877.621 kb on + strand, within B158DRAFT_0858 at 877.621 kb on + strand, within B158DRAFT_0858 at 877.623 kb on + strand, within B158DRAFT_0858 at 877.624 kb on - strand, within B158DRAFT_0858 at 877.624 kb on - strand, within B158DRAFT_0858 at 877.624 kb on - strand, within B158DRAFT_0858 at 877.629 kb on - strand, within B158DRAFT_0858 at 877.645 kb on + strand, within B158DRAFT_0858 at 877.645 kb on + strand, within B158DRAFT_0858 at 877.645 kb on - strand, within B158DRAFT_0858 at 877.653 kb on - strand, within B158DRAFT_0858 at 877.660 kb on + strand, within B158DRAFT_0858 at 877.722 kb on - strand, within B158DRAFT_0858 at 877.805 kb on + strand, within B158DRAFT_0858 at 877.805 kb on + strand, within B158DRAFT_0858 at 877.805 kb on + strand, within B158DRAFT_0858 at 877.831 kb on + strand, within B158DRAFT_0858 at 877.839 kb on - strand, within B158DRAFT_0858 at 877.839 kb on - strand, within B158DRAFT_0858 at 877.841 kb on + strand, within B158DRAFT_0858 at 877.841 kb on - strand, within B158DRAFT_0858 at 877.883 kb on + strand, within B158DRAFT_0858 at 877.883 kb on + strand, within B158DRAFT_0858 at 877.931 kb on + strand, within B158DRAFT_0858 at 877.949 kb on + strand, within B158DRAFT_0858 at 877.957 kb on - strand, within B158DRAFT_0858 at 877.957 kb on - strand, within B158DRAFT_0858 at 877.962 kb on - strand, within B158DRAFT_0858 at 877.976 kb on + strand, within B158DRAFT_0858 at 877.976 kb on + strand, within B158DRAFT_0858 at 877.976 kb on + strand, within B158DRAFT_0858 at 877.976 kb on + strand, within B158DRAFT_0858 at 877.981 kb on + strand, within B158DRAFT_0858 at 877.984 kb on - strand, within B158DRAFT_0858 at 877.984 kb on - strand, within B158DRAFT_0858 at 877.984 kb on - strand, within B158DRAFT_0858 at 878.012 kb on + strand at 878.064 kb on - strand at 878.095 kb on + strand at 878.095 kb on + strand at 878.095 kb on + strand at 878.097 kb on + strand at 878.104 kb on + strand at 878.154 kb on - strand at 878.162 kb on + strand at 878.189 kb on + strand at 878.206 kb on + strand at 878.310 kb on - strand, within B158DRAFT_0859 at 878.327 kb on - strand, within B158DRAFT_0859 at 878.529 kb on - strand, within B158DRAFT_0859 at 878.554 kb on + strand, within B158DRAFT_0859 at 878.564 kb on + strand, within B158DRAFT_0859 at 878.595 kb on + strand, within B158DRAFT_0859 at 878.600 kb on + strand, within B158DRAFT_0859 at 878.605 kb on + strand, within B158DRAFT_0859 at 878.668 kb on + strand, within B158DRAFT_0859 at 878.676 kb on - strand, within B158DRAFT_0859 at 878.699 kb on - strand, within B158DRAFT_0859 at 878.887 kb on + strand, within B158DRAFT_0859 at 878.927 kb on + strand, within B158DRAFT_0859 at 878.927 kb on + strand, within B158DRAFT_0859 at 878.935 kb on - strand, within B158DRAFT_0859 at 878.953 kb on + strand, within B158DRAFT_0859 at 878.963 kb on - strand, within B158DRAFT_0859 at 878.963 kb on - strand, within B158DRAFT_0859 at 879.002 kb on - strand, within B158DRAFT_0859
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.2 mg/ml remove 875,780 + B158DRAFT_0856 0.66 +0.1 875,780 + B158DRAFT_0856 0.66 +0.1 875,788 - B158DRAFT_0856 0.68 -0.4 875,818 - B158DRAFT_0856 0.74 -0.5 875,846 + B158DRAFT_0856 0.79 +0.1 875,846 + B158DRAFT_0856 0.79 -0.6 875,851 + B158DRAFT_0856 0.80 +0.3 875,854 - B158DRAFT_0856 0.80 -0.7 875,854 - B158DRAFT_0856 0.80 +0.1 875,854 - B158DRAFT_0856 0.80 +1.0 875,854 - B158DRAFT_0856 0.80 -0.2 875,856 - B158DRAFT_0856 0.81 +0.3 875,918 + -0.9 875,918 + -0.0 875,918 + +0.9 875,921 - +0.7 875,926 + -0.7 875,926 - +0.1 875,934 - -0.9 875,934 - +0.6 875,934 - +0.2 875,934 - -0.6 875,936 + +0.3 875,936 + -0.3 875,936 + +0.1 875,936 + -0.6 875,944 - +0.2 875,944 - +0.2 875,944 - +0.6 875,944 - +0.3 875,944 - -0.2 875,989 - -0.2 876,010 + -0.6 876,018 - -0.2 876,151 - -0.5 876,151 - -0.7 876,151 - -2.3 876,153 + B158DRAFT_0857 0.10 +0.4 876,178 + B158DRAFT_0857 0.15 -0.8 876,187 + B158DRAFT_0857 0.17 -1.2 876,187 + B158DRAFT_0857 0.17 -0.4 876,276 - B158DRAFT_0857 0.36 -0.4 876,276 - B158DRAFT_0857 0.36 -1.2 876,291 - B158DRAFT_0857 0.39 -0.7 876,293 + B158DRAFT_0857 0.40 -0.9 876,293 + B158DRAFT_0857 0.40 +0.1 876,293 + B158DRAFT_0857 0.40 -0.7 876,293 + B158DRAFT_0857 0.40 -0.4 876,293 + B158DRAFT_0857 0.40 -0.5 876,301 - B158DRAFT_0857 0.41 -0.6 876,301 - B158DRAFT_0857 0.41 +0.1 876,301 - B158DRAFT_0857 0.41 -1.1 876,301 - B158DRAFT_0857 0.41 -1.5 876,301 - B158DRAFT_0857 0.41 -0.8 876,301 - B158DRAFT_0857 0.41 -0.7 876,301 - B158DRAFT_0857 0.41 -0.2 876,312 + B158DRAFT_0857 0.44 -1.0 876,313 + B158DRAFT_0857 0.44 -0.5 876,321 - B158DRAFT_0857 0.46 -1.2 876,321 - B158DRAFT_0857 0.46 -2.1 876,384 + B158DRAFT_0857 0.59 -0.8 876,419 - B158DRAFT_0857 0.66 -0.4 876,447 - B158DRAFT_0857 0.72 -0.3 876,454 + B158DRAFT_0857 0.74 -0.6 876,454 + B158DRAFT_0857 0.74 -0.7 876,454 + B158DRAFT_0857 0.74 +0.7 876,455 - B158DRAFT_0857 0.74 -0.6 876,462 - B158DRAFT_0857 0.75 -0.7 876,462 - B158DRAFT_0857 0.75 -0.7 876,462 - B158DRAFT_0857 0.75 -0.8 876,464 + B158DRAFT_0857 0.76 -0.4 876,482 + B158DRAFT_0857 0.80 -1.0 876,530 - B158DRAFT_0857 0.90 -0.2 876,546 + -0.4 876,546 + +1.5 876,638 + -0.6 876,638 + +0.3 876,646 - -0.1 876,648 + -0.0 876,653 + +0.5 876,653 + -0.4 876,653 + -0.2 876,653 + -0.9 876,653 + -0.2 876,653 + -0.4 876,653 + +0.2 876,653 + +0.6 876,661 - -0.8 876,661 - -1.0 876,661 - -0.1 876,661 - -0.0 876,661 - +0.3 876,661 - -0.0 876,661 - -0.4 876,661 - -0.2 876,661 - +0.5 876,671 - -0.6 876,780 + -0.3 876,821 + +0.4 876,821 + -0.5 876,821 + +2.6 876,821 + -0.5 876,821 + -0.5 876,821 + -0.1 876,829 - -0.3 876,829 - +0.1 876,829 - -0.5 876,829 - -0.2 876,829 - +1.0 876,829 - -1.1 876,829 - -0.1 876,829 - +0.0 876,847 + -0.5 876,907 - B158DRAFT_0858 0.11 +0.3 877,051 - B158DRAFT_0858 0.22 +0.6 877,061 - B158DRAFT_0858 0.23 -0.4 877,145 + B158DRAFT_0858 0.29 -0.0 877,145 + B158DRAFT_0858 0.29 -0.1 877,145 + B158DRAFT_0858 0.29 +0.3 877,148 - B158DRAFT_0858 0.29 -0.2 877,153 - B158DRAFT_0858 0.29 -0.1 877,153 - B158DRAFT_0858 0.29 -0.0 877,153 - B158DRAFT_0858 0.29 -0.0 877,154 - B158DRAFT_0858 0.29 +0.2 877,172 + B158DRAFT_0858 0.31 -0.9 877,219 + B158DRAFT_0858 0.34 -0.2 877,233 + B158DRAFT_0858 0.35 -0.4 877,275 + B158DRAFT_0858 0.38 -0.2 877,298 - B158DRAFT_0858 0.40 -0.4 877,298 - B158DRAFT_0858 0.40 +0.1 877,298 - B158DRAFT_0858 0.40 -0.3 877,340 + B158DRAFT_0858 0.43 -0.1 877,394 + B158DRAFT_0858 0.47 -0.2 877,484 - B158DRAFT_0858 0.53 -1.3 877,484 - B158DRAFT_0858 0.53 +0.2 877,486 - B158DRAFT_0858 0.53 +0.7 877,491 + B158DRAFT_0858 0.54 -0.3 877,528 - B158DRAFT_0858 0.56 +0.3 877,616 + B158DRAFT_0858 0.63 +0.6 877,616 + B158DRAFT_0858 0.63 -0.6 877,621 + B158DRAFT_0858 0.63 -0.2 877,621 + B158DRAFT_0858 0.63 +0.0 877,623 + B158DRAFT_0858 0.63 -0.1 877,624 - B158DRAFT_0858 0.63 -0.4 877,624 - B158DRAFT_0858 0.63 +0.1 877,624 - B158DRAFT_0858 0.63 -0.2 877,629 - B158DRAFT_0858 0.64 +0.2 877,645 + B158DRAFT_0858 0.65 -0.8 877,645 + B158DRAFT_0858 0.65 +0.6 877,645 - B158DRAFT_0858 0.65 -0.5 877,653 - B158DRAFT_0858 0.65 +0.0 877,660 + B158DRAFT_0858 0.66 -0.1 877,722 - B158DRAFT_0858 0.70 -0.6 877,805 + B158DRAFT_0858 0.76 -0.1 877,805 + B158DRAFT_0858 0.76 -0.5 877,805 + B158DRAFT_0858 0.76 +0.5 877,831 + B158DRAFT_0858 0.78 -0.2 877,839 - B158DRAFT_0858 0.79 -1.1 877,839 - B158DRAFT_0858 0.79 -2.0 877,841 + B158DRAFT_0858 0.79 -0.9 877,841 - B158DRAFT_0858 0.79 -0.8 877,883 + B158DRAFT_0858 0.82 +0.5 877,883 + B158DRAFT_0858 0.82 -0.9 877,931 + B158DRAFT_0858 0.86 -0.2 877,949 + B158DRAFT_0858 0.87 +0.4 877,957 - B158DRAFT_0858 0.87 +0.5 877,957 - B158DRAFT_0858 0.87 -0.4 877,962 - B158DRAFT_0858 0.88 -0.1 877,976 + B158DRAFT_0858 0.89 -0.4 877,976 + B158DRAFT_0858 0.89 -0.9 877,976 + B158DRAFT_0858 0.89 -0.3 877,976 + B158DRAFT_0858 0.89 -0.2 877,981 + B158DRAFT_0858 0.89 -0.1 877,984 - B158DRAFT_0858 0.89 -0.3 877,984 - B158DRAFT_0858 0.89 -0.2 877,984 - B158DRAFT_0858 0.89 +0.3 878,012 + -0.2 878,064 - -0.5 878,095 + +0.7 878,095 + -0.1 878,095 + -0.3 878,097 + -0.4 878,104 + -0.4 878,154 - -1.5 878,162 + -2.1 878,189 + -1.3 878,206 + -2.0 878,310 - B158DRAFT_0859 0.14 +0.3 878,327 - B158DRAFT_0859 0.15 -2.0 878,529 - B158DRAFT_0859 0.30 -1.0 878,554 + B158DRAFT_0859 0.32 -0.7 878,564 + B158DRAFT_0859 0.33 -1.5 878,595 + B158DRAFT_0859 0.35 -0.3 878,600 + B158DRAFT_0859 0.36 -3.1 878,605 + B158DRAFT_0859 0.36 -2.3 878,668 + B158DRAFT_0859 0.41 -1.5 878,676 - B158DRAFT_0859 0.41 -2.3 878,699 - B158DRAFT_0859 0.43 -1.0 878,887 + B158DRAFT_0859 0.57 -1.3 878,927 + B158DRAFT_0859 0.60 -0.7 878,927 + B158DRAFT_0859 0.60 -1.5 878,935 - B158DRAFT_0859 0.61 -2.4 878,953 + B158DRAFT_0859 0.62 -1.9 878,963 - B158DRAFT_0859 0.63 -2.4 878,963 - B158DRAFT_0859 0.63 -0.9 879,002 - B158DRAFT_0859 0.66 -1.9
Or see this region's nucleotide sequence