Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0793

Experiment: m.b. benzoic 0.2 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0792 and B158DRAFT_0793 overlap by 4 nucleotidesB158DRAFT_0793 and B158DRAFT_0794 are separated by 2 nucleotidesB158DRAFT_0794 and B158DRAFT_0795 are separated by 29 nucleotides B158DRAFT_0792: B158DRAFT_0792 - Predicted phosphotransferase related to Ser/Thr protein kinases, at 797,150 to 798,184 _0792 B158DRAFT_0793: B158DRAFT_0793 - Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon), at 798,181 to 798,885 _0793 B158DRAFT_0794: B158DRAFT_0794 - DnaJ-domain-containing proteins 1, at 798,888 to 799,700 _0794 B158DRAFT_0795: B158DRAFT_0795 - Uncharacterized protein conserved in bacteria, at 799,730 to 800,371 _0795 Position (kb) 798 799Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 797.246 kb on + strandat 797.350 kb on - strand, within B158DRAFT_0792at 797.392 kb on + strand, within B158DRAFT_0792at 797.399 kb on + strand, within B158DRAFT_0792at 797.400 kb on + strand, within B158DRAFT_0792at 797.400 kb on - strand, within B158DRAFT_0792at 797.501 kb on - strand, within B158DRAFT_0792at 797.501 kb on - strand, within B158DRAFT_0792at 797.509 kb on - strand, within B158DRAFT_0792at 797.542 kb on + strand, within B158DRAFT_0792at 797.542 kb on + strand, within B158DRAFT_0792at 797.542 kb on + strand, within B158DRAFT_0792at 797.542 kb on + strand, within B158DRAFT_0792at 797.550 kb on - strand, within B158DRAFT_0792at 797.568 kb on + strand, within B158DRAFT_0792at 797.570 kb on + strand, within B158DRAFT_0792at 797.580 kb on + strand, within B158DRAFT_0792at 797.644 kb on + strand, within B158DRAFT_0792at 797.706 kb on + strand, within B158DRAFT_0792at 797.706 kb on + strand, within B158DRAFT_0792at 797.711 kb on - strand, within B158DRAFT_0792at 797.715 kb on + strand, within B158DRAFT_0792at 797.771 kb on + strand, within B158DRAFT_0792at 797.787 kb on - strand, within B158DRAFT_0792at 797.853 kb on + strand, within B158DRAFT_0792at 797.867 kb on + strand, within B158DRAFT_0792at 797.872 kb on + strand, within B158DRAFT_0792at 797.872 kb on + strand, within B158DRAFT_0792at 797.880 kb on - strand, within B158DRAFT_0792at 797.897 kb on - strand, within B158DRAFT_0792at 797.985 kb on - strand, within B158DRAFT_0792at 798.047 kb on + strand, within B158DRAFT_0792at 798.056 kb on - strand, within B158DRAFT_0792at 798.085 kb on - strandat 798.105 kb on - strandat 798.126 kb on + strandat 798.126 kb on + strandat 798.126 kb on + strandat 798.134 kb on - strandat 798.134 kb on - strandat 798.134 kb on - strandat 798.134 kb on - strandat 798.251 kb on - strandat 798.251 kb on - strandat 798.251 kb on - strandat 798.338 kb on + strand, within B158DRAFT_0793at 798.472 kb on + strand, within B158DRAFT_0793at 798.506 kb on + strand, within B158DRAFT_0793at 798.511 kb on + strand, within B158DRAFT_0793at 798.517 kb on + strand, within B158DRAFT_0793at 798.549 kb on - strand, within B158DRAFT_0793at 798.624 kb on + strand, within B158DRAFT_0793at 798.624 kb on + strand, within B158DRAFT_0793at 798.624 kb on + strand, within B158DRAFT_0793at 798.624 kb on + strand, within B158DRAFT_0793at 798.632 kb on - strand, within B158DRAFT_0793at 798.632 kb on - strand, within B158DRAFT_0793at 798.632 kb on - strand, within B158DRAFT_0793at 798.641 kb on + strand, within B158DRAFT_0793at 798.686 kb on + strand, within B158DRAFT_0793at 798.714 kb on - strand, within B158DRAFT_0793at 798.914 kb on - strandat 798.914 kb on - strandat 798.914 kb on - strandat 798.917 kb on + strandat 798.954 kb on + strandat 798.962 kb on - strandat 798.964 kb on + strandat 798.964 kb on + strandat 798.974 kb on - strand, within B158DRAFT_0794at 798.974 kb on - strand, within B158DRAFT_0794at 799.011 kb on - strand, within B158DRAFT_0794at 799.011 kb on - strand, within B158DRAFT_0794at 799.062 kb on + strand, within B158DRAFT_0794at 799.292 kb on - strand, within B158DRAFT_0794at 799.328 kb on + strand, within B158DRAFT_0794at 799.328 kb on + strand, within B158DRAFT_0794at 799.336 kb on - strand, within B158DRAFT_0794at 799.402 kb on - strand, within B158DRAFT_0794at 799.430 kb on + strand, within B158DRAFT_0794at 799.432 kb on + strand, within B158DRAFT_0794at 799.492 kb on + strand, within B158DRAFT_0794at 799.492 kb on + strand, within B158DRAFT_0794at 799.492 kb on + strand, within B158DRAFT_0794at 799.492 kb on + strand, within B158DRAFT_0794at 799.497 kb on + strand, within B158DRAFT_0794at 799.497 kb on + strand, within B158DRAFT_0794at 799.500 kb on - strand, within B158DRAFT_0794at 799.500 kb on - strand, within B158DRAFT_0794at 799.588 kb on - strand, within B158DRAFT_0794

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. benzoic 0.2 mg/ml
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797,246 + -2.6
797,350 - B158DRAFT_0792 0.19 -3.1
797,392 + B158DRAFT_0792 0.23 -1.8
797,399 + B158DRAFT_0792 0.24 +0.3
797,400 + B158DRAFT_0792 0.24 -2.0
797,400 - B158DRAFT_0792 0.24 -1.5
797,501 - B158DRAFT_0792 0.34 -5.0
797,501 - B158DRAFT_0792 0.34 -2.2
797,509 - B158DRAFT_0792 0.35 -2.6
797,542 + B158DRAFT_0792 0.38 -1.6
797,542 + B158DRAFT_0792 0.38 -3.5
797,542 + B158DRAFT_0792 0.38 -2.8
797,542 + B158DRAFT_0792 0.38 -2.7
797,550 - B158DRAFT_0792 0.39 -1.7
797,568 + B158DRAFT_0792 0.40 -2.7
797,570 + B158DRAFT_0792 0.41 -2.0
797,580 + B158DRAFT_0792 0.42 -1.5
797,644 + B158DRAFT_0792 0.48 -3.8
797,706 + B158DRAFT_0792 0.54 -0.8
797,706 + B158DRAFT_0792 0.54 -1.2
797,711 - B158DRAFT_0792 0.54 -3.1
797,715 + B158DRAFT_0792 0.55 -1.8
797,771 + B158DRAFT_0792 0.60 -3.5
797,787 - B158DRAFT_0792 0.62 -3.2
797,853 + B158DRAFT_0792 0.68 -0.5
797,867 + B158DRAFT_0792 0.69 -0.2
797,872 + B158DRAFT_0792 0.70 -3.6
797,872 + B158DRAFT_0792 0.70 -2.7
797,880 - B158DRAFT_0792 0.71 -2.2
797,897 - B158DRAFT_0792 0.72 -3.9
797,985 - B158DRAFT_0792 0.81 -3.6
798,047 + B158DRAFT_0792 0.87 -0.2
798,056 - B158DRAFT_0792 0.88 -1.2
798,085 - -2.6
798,105 - -2.3
798,126 + -0.7
798,126 + +0.1
798,126 + -1.0
798,134 - -1.0
798,134 - -2.2
798,134 - -1.2
798,134 - -2.2
798,251 - -3.4
798,251 - -1.2
798,251 - -3.2
798,338 + B158DRAFT_0793 0.22 -2.5
798,472 + B158DRAFT_0793 0.41 -2.8
798,506 + B158DRAFT_0793 0.46 -2.7
798,511 + B158DRAFT_0793 0.47 -2.9
798,517 + B158DRAFT_0793 0.48 -3.1
798,549 - B158DRAFT_0793 0.52 -2.6
798,624 + B158DRAFT_0793 0.63 -2.9
798,624 + B158DRAFT_0793 0.63 -2.0
798,624 + B158DRAFT_0793 0.63 -3.0
798,624 + B158DRAFT_0793 0.63 -4.4
798,632 - B158DRAFT_0793 0.64 -3.2
798,632 - B158DRAFT_0793 0.64 -4.1
798,632 - B158DRAFT_0793 0.64 -2.5
798,641 + B158DRAFT_0793 0.65 -4.1
798,686 + B158DRAFT_0793 0.72 -3.2
798,714 - B158DRAFT_0793 0.76 -3.6
798,914 - +0.0
798,914 - +0.2
798,914 - -0.1
798,917 + +0.4
798,954 + -0.3
798,962 - -1.3
798,964 + -0.5
798,964 + +0.3
798,974 - B158DRAFT_0794 0.11 -0.2
798,974 - B158DRAFT_0794 0.11 +0.9
799,011 - B158DRAFT_0794 0.15 -0.3
799,011 - B158DRAFT_0794 0.15 +0.0
799,062 + B158DRAFT_0794 0.21 -0.0
799,292 - B158DRAFT_0794 0.50 -0.6
799,328 + B158DRAFT_0794 0.54 -0.2
799,328 + B158DRAFT_0794 0.54 -1.3
799,336 - B158DRAFT_0794 0.55 -0.6
799,402 - B158DRAFT_0794 0.63 +0.4
799,430 + B158DRAFT_0794 0.67 -0.0
799,432 + B158DRAFT_0794 0.67 -0.6
799,492 + B158DRAFT_0794 0.74 +0.0
799,492 + B158DRAFT_0794 0.74 +0.1
799,492 + B158DRAFT_0794 0.74 +0.1
799,492 + B158DRAFT_0794 0.74 -0.4
799,497 + B158DRAFT_0794 0.75 -0.4
799,497 + B158DRAFT_0794 0.75 -0.1
799,500 - B158DRAFT_0794 0.75 +1.1
799,500 - B158DRAFT_0794 0.75 -0.2
799,588 - B158DRAFT_0794 0.86 +0.8

Or see this region's nucleotide sequence