Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0706

Experiment: m.b. benzoic 0.2 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0705 and B158DRAFT_0706 overlap by 14 nucleotidesB158DRAFT_0706 and B158DRAFT_0707 are separated by 172 nucleotides B158DRAFT_0705: B158DRAFT_0705 - Membrane-bound metallopeptidase, at 705,752 to 706,927 _0705 B158DRAFT_0706: B158DRAFT_0706 - phosphoglycerate mutase (EC 5.4.2.1), at 706,914 to 708,449 _0706 B158DRAFT_0707: B158DRAFT_0707 - Membrane protease subunits, stomatin/prohibitin homologs, at 708,622 to 709,545 _0707 Position (kb) 706 707 708 709Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 705.921 kb on + strand, within B158DRAFT_0705at 705.934 kb on - strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.958 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.999 kb on + strand, within B158DRAFT_0705at 706.100 kb on + strand, within B158DRAFT_0705at 706.144 kb on - strand, within B158DRAFT_0705at 706.171 kb on + strand, within B158DRAFT_0705at 706.294 kb on + strand, within B158DRAFT_0705at 706.294 kb on + strand, within B158DRAFT_0705at 706.294 kb on + strand, within B158DRAFT_0705at 706.294 kb on + strand, within B158DRAFT_0705at 706.326 kb on - strand, within B158DRAFT_0705at 706.358 kb on + strand, within B158DRAFT_0705at 706.402 kb on + strand, within B158DRAFT_0705at 706.410 kb on - strand, within B158DRAFT_0705at 706.410 kb on - strand, within B158DRAFT_0705at 706.621 kb on - strand, within B158DRAFT_0705at 706.622 kb on - strand, within B158DRAFT_0705at 706.672 kb on + strand, within B158DRAFT_0705at 706.672 kb on + strand, within B158DRAFT_0705at 706.680 kb on - strand, within B158DRAFT_0705at 706.680 kb on - strand, within B158DRAFT_0705at 706.870 kb on + strandat 706.877 kb on + strandat 706.929 kb on + strandat 706.929 kb on + strandat 708.438 kb on - strandat 708.447 kb on - strandat 708.519 kb on + strandat 708.695 kb on + strandat 708.695 kb on - strandat 708.741 kb on - strand, within B158DRAFT_0707at 708.748 kb on + strand, within B158DRAFT_0707at 708.748 kb on + strand, within B158DRAFT_0707at 708.748 kb on + strand, within B158DRAFT_0707at 708.748 kb on + strand, within B158DRAFT_0707at 708.748 kb on + strand, within B158DRAFT_0707at 708.755 kb on + strand, within B158DRAFT_0707at 708.755 kb on + strand, within B158DRAFT_0707at 708.756 kb on - strand, within B158DRAFT_0707at 708.756 kb on - strand, within B158DRAFT_0707at 708.756 kb on - strand, within B158DRAFT_0707at 708.756 kb on - strand, within B158DRAFT_0707at 708.756 kb on - strand, within B158DRAFT_0707at 708.763 kb on - strand, within B158DRAFT_0707at 708.765 kb on + strand, within B158DRAFT_0707at 708.790 kb on - strand, within B158DRAFT_0707at 708.828 kb on + strand, within B158DRAFT_0707at 708.836 kb on - strand, within B158DRAFT_0707at 708.858 kb on + strand, within B158DRAFT_0707at 708.866 kb on - strand, within B158DRAFT_0707at 708.866 kb on - strand, within B158DRAFT_0707at 708.866 kb on - strand, within B158DRAFT_0707at 708.871 kb on - strand, within B158DRAFT_0707at 708.931 kb on - strand, within B158DRAFT_0707at 708.985 kb on + strand, within B158DRAFT_0707at 708.985 kb on + strand, within B158DRAFT_0707at 708.985 kb on + strand, within B158DRAFT_0707at 708.985 kb on + strand, within B158DRAFT_0707at 708.985 kb on + strand, within B158DRAFT_0707at 708.985 kb on + strand, within B158DRAFT_0707at 708.985 kb on + strand, within B158DRAFT_0707at 708.985 kb on + strand, within B158DRAFT_0707at 708.993 kb on - strand, within B158DRAFT_0707at 708.993 kb on - strand, within B158DRAFT_0707at 708.993 kb on - strand, within B158DRAFT_0707at 708.993 kb on - strand, within B158DRAFT_0707at 708.995 kb on + strand, within B158DRAFT_0707at 709.003 kb on - strand, within B158DRAFT_0707at 709.008 kb on - strand, within B158DRAFT_0707at 709.017 kb on + strand, within B158DRAFT_0707at 709.017 kb on + strand, within B158DRAFT_0707at 709.025 kb on - strand, within B158DRAFT_0707at 709.068 kb on + strand, within B158DRAFT_0707at 709.068 kb on + strand, within B158DRAFT_0707at 709.068 kb on + strand, within B158DRAFT_0707at 709.068 kb on + strand, within B158DRAFT_0707at 709.068 kb on + strand, within B158DRAFT_0707at 709.074 kb on + strand, within B158DRAFT_0707at 709.074 kb on + strand, within B158DRAFT_0707at 709.074 kb on + strand, within B158DRAFT_0707at 709.074 kb on + strand, within B158DRAFT_0707at 709.076 kb on - strand, within B158DRAFT_0707at 709.082 kb on - strand, within B158DRAFT_0707at 709.082 kb on - strand, within B158DRAFT_0707at 709.084 kb on - strand, within B158DRAFT_0707at 709.090 kb on - strand, within B158DRAFT_0707at 709.096 kb on - strand, within B158DRAFT_0707at 709.104 kb on + strand, within B158DRAFT_0707at 709.155 kb on + strand, within B158DRAFT_0707at 709.155 kb on + strand, within B158DRAFT_0707at 709.155 kb on + strand, within B158DRAFT_0707at 709.155 kb on + strand, within B158DRAFT_0707at 709.155 kb on + strand, within B158DRAFT_0707at 709.155 kb on + strand, within B158DRAFT_0707at 709.161 kb on + strand, within B158DRAFT_0707at 709.163 kb on - strand, within B158DRAFT_0707at 709.163 kb on - strand, within B158DRAFT_0707at 709.163 kb on - strand, within B158DRAFT_0707at 709.163 kb on - strand, within B158DRAFT_0707at 709.163 kb on - strand, within B158DRAFT_0707at 709.163 kb on - strand, within B158DRAFT_0707at 709.163 kb on - strand, within B158DRAFT_0707at 709.202 kb on + strand, within B158DRAFT_0707at 709.202 kb on + strand, within B158DRAFT_0707at 709.202 kb on + strand, within B158DRAFT_0707at 709.202 kb on + strand, within B158DRAFT_0707at 709.202 kb on + strand, within B158DRAFT_0707at 709.202 kb on + strand, within B158DRAFT_0707at 709.202 kb on + strand, within B158DRAFT_0707at 709.202 kb on + strand, within B158DRAFT_0707at 709.202 kb on + strand, within B158DRAFT_0707at 709.202 kb on + strand, within B158DRAFT_0707at 709.202 kb on + strand, within B158DRAFT_0707at 709.202 kb on + strand, within B158DRAFT_0707at 709.210 kb on - strand, within B158DRAFT_0707at 709.210 kb on - strand, within B158DRAFT_0707at 709.210 kb on - strand, within B158DRAFT_0707at 709.210 kb on - strand, within B158DRAFT_0707at 709.210 kb on - strand, within B158DRAFT_0707at 709.242 kb on - strand, within B158DRAFT_0707at 709.314 kb on + strand, within B158DRAFT_0707at 709.322 kb on - strand, within B158DRAFT_0707at 709.359 kb on + strand, within B158DRAFT_0707at 709.360 kb on + strand, within B158DRAFT_0707at 709.449 kb on - strand, within B158DRAFT_0707

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. benzoic 0.2 mg/ml
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705,921 + B158DRAFT_0705 0.14 -2.6
705,934 - B158DRAFT_0705 0.15 -0.0
705,955 + B158DRAFT_0705 0.17 -1.2
705,955 + B158DRAFT_0705 0.17 -3.0
705,955 + B158DRAFT_0705 0.17 -4.2
705,955 + B158DRAFT_0705 0.17 -1.0
705,955 + B158DRAFT_0705 0.17 -1.7
705,958 - B158DRAFT_0705 0.18 +0.6
705,963 - B158DRAFT_0705 0.18 -0.5
705,963 - B158DRAFT_0705 0.18 -0.2
705,963 - B158DRAFT_0705 0.18 -0.1
705,963 - B158DRAFT_0705 0.18 -0.0
705,963 - B158DRAFT_0705 0.18 +0.3
705,963 - B158DRAFT_0705 0.18 -0.3
705,999 + B158DRAFT_0705 0.21 +0.1
706,100 + B158DRAFT_0705 0.30 +0.1
706,144 - B158DRAFT_0705 0.33 +0.4
706,171 + B158DRAFT_0705 0.36 +0.4
706,294 + B158DRAFT_0705 0.46 -0.2
706,294 + B158DRAFT_0705 0.46 +0.7
706,294 + B158DRAFT_0705 0.46 +1.9
706,294 + B158DRAFT_0705 0.46 +0.4
706,326 - B158DRAFT_0705 0.49 +0.0
706,358 + B158DRAFT_0705 0.52 +1.2
706,402 + B158DRAFT_0705 0.55 +0.4
706,410 - B158DRAFT_0705 0.56 +0.9
706,410 - B158DRAFT_0705 0.56 +0.6
706,621 - B158DRAFT_0705 0.74 +0.5
706,622 - B158DRAFT_0705 0.74 +0.2
706,672 + B158DRAFT_0705 0.78 +0.7
706,672 + B158DRAFT_0705 0.78 +0.1
706,680 - B158DRAFT_0705 0.79 +1.0
706,680 - B158DRAFT_0705 0.79 +0.2
706,870 + +0.5
706,877 + -0.1
706,929 + -2.4
706,929 + +0.3
708,438 - +1.3
708,447 - -1.5
708,519 + -0.4
708,695 + -0.1
708,695 - -0.4
708,741 - B158DRAFT_0707 0.13 -0.2
708,748 + B158DRAFT_0707 0.14 -1.0
708,748 + B158DRAFT_0707 0.14 -0.2
708,748 + B158DRAFT_0707 0.14 +0.0
708,748 + B158DRAFT_0707 0.14 -0.2
708,748 + B158DRAFT_0707 0.14 -0.4
708,755 + B158DRAFT_0707 0.14 +0.5
708,755 + B158DRAFT_0707 0.14 -0.7
708,756 - B158DRAFT_0707 0.15 -0.3
708,756 - B158DRAFT_0707 0.15 +0.1
708,756 - B158DRAFT_0707 0.15 +0.3
708,756 - B158DRAFT_0707 0.15 -0.3
708,756 - B158DRAFT_0707 0.15 -0.2
708,763 - B158DRAFT_0707 0.15 -0.3
708,765 + B158DRAFT_0707 0.15 +0.2
708,790 - B158DRAFT_0707 0.18 -0.3
708,828 + B158DRAFT_0707 0.22 -0.1
708,836 - B158DRAFT_0707 0.23 -1.1
708,858 + B158DRAFT_0707 0.26 +0.7
708,866 - B158DRAFT_0707 0.26 +0.6
708,866 - B158DRAFT_0707 0.26 -0.3
708,866 - B158DRAFT_0707 0.26 -0.7
708,871 - B158DRAFT_0707 0.27 +0.4
708,931 - B158DRAFT_0707 0.33 -0.2
708,985 + B158DRAFT_0707 0.39 +0.9
708,985 + B158DRAFT_0707 0.39 -1.2
708,985 + B158DRAFT_0707 0.39 +0.3
708,985 + B158DRAFT_0707 0.39 +0.1
708,985 + B158DRAFT_0707 0.39 +1.3
708,985 + B158DRAFT_0707 0.39 +0.2
708,985 + B158DRAFT_0707 0.39 +0.2
708,985 + B158DRAFT_0707 0.39 -0.2
708,993 - B158DRAFT_0707 0.40 -0.3
708,993 - B158DRAFT_0707 0.40 +0.0
708,993 - B158DRAFT_0707 0.40 +0.4
708,993 - B158DRAFT_0707 0.40 -0.0
708,995 + B158DRAFT_0707 0.40 +1.9
709,003 - B158DRAFT_0707 0.41 -0.2
709,008 - B158DRAFT_0707 0.42 +1.3
709,017 + B158DRAFT_0707 0.43 +0.1
709,017 + B158DRAFT_0707 0.43 +0.1
709,025 - B158DRAFT_0707 0.44 -1.0
709,068 + B158DRAFT_0707 0.48 +2.1
709,068 + B158DRAFT_0707 0.48 -0.3
709,068 + B158DRAFT_0707 0.48 +0.9
709,068 + B158DRAFT_0707 0.48 +0.2
709,068 + B158DRAFT_0707 0.48 +0.6
709,074 + B158DRAFT_0707 0.49 +0.6
709,074 + B158DRAFT_0707 0.49 +0.3
709,074 + B158DRAFT_0707 0.49 -0.0
709,074 + B158DRAFT_0707 0.49 -0.2
709,076 - B158DRAFT_0707 0.49 +0.2
709,082 - B158DRAFT_0707 0.50 +0.2
709,082 - B158DRAFT_0707 0.50 +0.2
709,084 - B158DRAFT_0707 0.50 +0.2
709,090 - B158DRAFT_0707 0.51 -0.2
709,096 - B158DRAFT_0707 0.51 +0.2
709,104 + B158DRAFT_0707 0.52 +0.0
709,155 + B158DRAFT_0707 0.58 -1.0
709,155 + B158DRAFT_0707 0.58 +0.3
709,155 + B158DRAFT_0707 0.58 -0.2
709,155 + B158DRAFT_0707 0.58 -0.3
709,155 + B158DRAFT_0707 0.58 -0.0
709,155 + B158DRAFT_0707 0.58 -0.5
709,161 + B158DRAFT_0707 0.58 +0.1
709,163 - B158DRAFT_0707 0.59 +1.2
709,163 - B158DRAFT_0707 0.59 -0.1
709,163 - B158DRAFT_0707 0.59 -0.9
709,163 - B158DRAFT_0707 0.59 +0.3
709,163 - B158DRAFT_0707 0.59 +0.1
709,163 - B158DRAFT_0707 0.59 +0.0
709,163 - B158DRAFT_0707 0.59 -0.3
709,202 + B158DRAFT_0707 0.63 +0.1
709,202 + B158DRAFT_0707 0.63 -0.1
709,202 + B158DRAFT_0707 0.63 -0.1
709,202 + B158DRAFT_0707 0.63 -0.3
709,202 + B158DRAFT_0707 0.63 -0.4
709,202 + B158DRAFT_0707 0.63 +0.8
709,202 + B158DRAFT_0707 0.63 +0.1
709,202 + B158DRAFT_0707 0.63 -0.2
709,202 + B158DRAFT_0707 0.63 +0.2
709,202 + B158DRAFT_0707 0.63 -0.3
709,202 + B158DRAFT_0707 0.63 +0.9
709,202 + B158DRAFT_0707 0.63 -0.4
709,210 - B158DRAFT_0707 0.64 -0.4
709,210 - B158DRAFT_0707 0.64 -0.4
709,210 - B158DRAFT_0707 0.64 -0.1
709,210 - B158DRAFT_0707 0.64 +0.5
709,210 - B158DRAFT_0707 0.64 -0.3
709,242 - B158DRAFT_0707 0.67 -0.3
709,314 + B158DRAFT_0707 0.75 -0.1
709,322 - B158DRAFT_0707 0.76 -0.3
709,359 + B158DRAFT_0707 0.80 -0.7
709,360 + B158DRAFT_0707 0.80 +0.1
709,449 - B158DRAFT_0707 0.90 +0.3

Or see this region's nucleotide sequence