Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1301 and B158DRAFT_1302 are separated by 2 nucleotides B158DRAFT_1302 and B158DRAFT_1303 are separated by 93 nucleotides
B158DRAFT_1301: B158DRAFT_1301 - Kef-type potassium/proton antiporter, CPA2 family (TC 2.A.37.1), at 1,346,970 to 1,348,859
_1301
B158DRAFT_1302: B158DRAFT_1302 - ABC-type uncharacterized transport system, permease component, at 1,348,862 to 1,349,578
_1302
B158DRAFT_1303: B158DRAFT_1303 - Pirin-related protein, at 1,349,672 to 1,350,544
_1303
Position (kb)
1348
1349
1350 Strain fitness (log2 ratio)
-1
0
1 at 1347.996 kb on - strand, within B158DRAFT_1301 at 1348.030 kb on + strand, within B158DRAFT_1301 at 1348.030 kb on + strand, within B158DRAFT_1301 at 1348.035 kb on + strand, within B158DRAFT_1301 at 1348.035 kb on + strand, within B158DRAFT_1301 at 1348.035 kb on + strand, within B158DRAFT_1301 at 1348.038 kb on - strand, within B158DRAFT_1301 at 1348.038 kb on - strand, within B158DRAFT_1301 at 1348.043 kb on - strand, within B158DRAFT_1301 at 1348.084 kb on + strand, within B158DRAFT_1301 at 1348.097 kb on - strand, within B158DRAFT_1301 at 1348.221 kb on + strand, within B158DRAFT_1301 at 1348.254 kb on - strand, within B158DRAFT_1301 at 1348.262 kb on + strand, within B158DRAFT_1301 at 1348.291 kb on + strand, within B158DRAFT_1301 at 1348.314 kb on - strand, within B158DRAFT_1301 at 1348.401 kb on - strand, within B158DRAFT_1301 at 1348.427 kb on + strand, within B158DRAFT_1301 at 1348.435 kb on + strand, within B158DRAFT_1301 at 1348.442 kb on + strand, within B158DRAFT_1301 at 1348.443 kb on - strand, within B158DRAFT_1301 at 1348.443 kb on - strand, within B158DRAFT_1301 at 1348.450 kb on - strand, within B158DRAFT_1301 at 1348.482 kb on + strand, within B158DRAFT_1301 at 1348.490 kb on - strand, within B158DRAFT_1301 at 1348.490 kb on - strand, within B158DRAFT_1301 at 1348.500 kb on - strand, within B158DRAFT_1301 at 1348.508 kb on - strand, within B158DRAFT_1301 at 1348.512 kb on + strand, within B158DRAFT_1301 at 1348.558 kb on + strand, within B158DRAFT_1301 at 1348.577 kb on - strand, within B158DRAFT_1301 at 1348.747 kb on - strand at 1348.756 kb on + strand at 1348.761 kb on + strand at 1348.769 kb on - strand at 1348.777 kb on + strand at 1348.793 kb on + strand at 1348.894 kb on + strand at 1348.944 kb on + strand, within B158DRAFT_1302 at 1348.947 kb on + strand, within B158DRAFT_1302 at 1348.961 kb on + strand, within B158DRAFT_1302 at 1349.020 kb on + strand, within B158DRAFT_1302 at 1349.023 kb on - strand, within B158DRAFT_1302 at 1349.068 kb on - strand, within B158DRAFT_1302 at 1349.108 kb on + strand, within B158DRAFT_1302 at 1349.151 kb on - strand, within B158DRAFT_1302 at 1349.161 kb on + strand, within B158DRAFT_1302 at 1349.161 kb on - strand, within B158DRAFT_1302 at 1349.169 kb on - strand, within B158DRAFT_1302 at 1349.288 kb on - strand, within B158DRAFT_1302 at 1349.300 kb on + strand, within B158DRAFT_1302 at 1349.300 kb on + strand, within B158DRAFT_1302 at 1349.300 kb on + strand, within B158DRAFT_1302 at 1349.300 kb on + strand, within B158DRAFT_1302 at 1349.308 kb on - strand, within B158DRAFT_1302 at 1349.308 kb on - strand, within B158DRAFT_1302 at 1349.347 kb on + strand, within B158DRAFT_1302 at 1349.356 kb on + strand, within B158DRAFT_1302 at 1349.388 kb on - strand, within B158DRAFT_1302 at 1349.558 kb on - strand at 1349.565 kb on - strand at 1349.567 kb on + strand at 1349.572 kb on + strand at 1349.580 kb on - strand at 1349.590 kb on - strand at 1349.646 kb on + strand at 1349.653 kb on + strand at 1349.654 kb on - strand at 1349.654 kb on - strand at 1349.661 kb on - strand at 1349.661 kb on - strand at 1349.730 kb on + strand at 1349.738 kb on + strand at 1349.842 kb on - strand, within B158DRAFT_1303 at 1349.888 kb on - strand, within B158DRAFT_1303 at 1349.946 kb on + strand, within B158DRAFT_1303 at 1349.946 kb on + strand, within B158DRAFT_1303 at 1349.946 kb on + strand, within B158DRAFT_1303 at 1349.949 kb on + strand, within B158DRAFT_1303 at 1349.956 kb on + strand, within B158DRAFT_1303 at 1349.956 kb on + strand, within B158DRAFT_1303 at 1349.956 kb on - strand, within B158DRAFT_1303 at 1349.956 kb on - strand, within B158DRAFT_1303 at 1349.964 kb on - strand, within B158DRAFT_1303 at 1349.964 kb on - strand, within B158DRAFT_1303 at 1350.027 kb on - strand, within B158DRAFT_1303 at 1350.036 kb on + strand, within B158DRAFT_1303 at 1350.056 kb on - strand, within B158DRAFT_1303 at 1350.075 kb on - strand, within B158DRAFT_1303 at 1350.112 kb on + strand, within B158DRAFT_1303 at 1350.146 kb on - strand, within B158DRAFT_1303 at 1350.190 kb on + strand, within B158DRAFT_1303 at 1350.252 kb on - strand, within B158DRAFT_1303 at 1350.272 kb on - strand, within B158DRAFT_1303 at 1350.338 kb on + strand, within B158DRAFT_1303 at 1350.384 kb on - strand, within B158DRAFT_1303 at 1350.403 kb on - strand, within B158DRAFT_1303
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 1,347,996 - B158DRAFT_1301 0.54 -0.3 1,348,030 + B158DRAFT_1301 0.56 -0.3 1,348,030 + B158DRAFT_1301 0.56 +0.1 1,348,035 + B158DRAFT_1301 0.56 +0.8 1,348,035 + B158DRAFT_1301 0.56 +0.1 1,348,035 + B158DRAFT_1301 0.56 -0.5 1,348,038 - B158DRAFT_1301 0.57 +0.0 1,348,038 - B158DRAFT_1301 0.57 -0.5 1,348,043 - B158DRAFT_1301 0.57 -0.5 1,348,084 + B158DRAFT_1301 0.59 +0.1 1,348,097 - B158DRAFT_1301 0.60 -0.5 1,348,221 + B158DRAFT_1301 0.66 +0.2 1,348,254 - B158DRAFT_1301 0.68 +0.1 1,348,262 + B158DRAFT_1301 0.68 -0.2 1,348,291 + B158DRAFT_1301 0.70 -0.5 1,348,314 - B158DRAFT_1301 0.71 -0.0 1,348,401 - B158DRAFT_1301 0.76 -0.5 1,348,427 + B158DRAFT_1301 0.77 -0.2 1,348,435 + B158DRAFT_1301 0.78 +0.1 1,348,442 + B158DRAFT_1301 0.78 +0.5 1,348,443 - B158DRAFT_1301 0.78 +0.2 1,348,443 - B158DRAFT_1301 0.78 -0.2 1,348,450 - B158DRAFT_1301 0.78 -0.4 1,348,482 + B158DRAFT_1301 0.80 -0.2 1,348,490 - B158DRAFT_1301 0.80 +0.2 1,348,490 - B158DRAFT_1301 0.80 +0.1 1,348,500 - B158DRAFT_1301 0.81 -0.9 1,348,508 - B158DRAFT_1301 0.81 +0.1 1,348,512 + B158DRAFT_1301 0.82 +0.2 1,348,558 + B158DRAFT_1301 0.84 -0.3 1,348,577 - B158DRAFT_1301 0.85 +0.2 1,348,747 - +0.2 1,348,756 + -0.1 1,348,761 + -0.0 1,348,769 - -0.2 1,348,777 + +0.3 1,348,793 + -0.2 1,348,894 + -0.7 1,348,944 + B158DRAFT_1302 0.11 +0.0 1,348,947 + B158DRAFT_1302 0.12 -0.4 1,348,961 + B158DRAFT_1302 0.14 -0.6 1,349,020 + B158DRAFT_1302 0.22 -0.8 1,349,023 - B158DRAFT_1302 0.22 +0.2 1,349,068 - B158DRAFT_1302 0.29 -0.1 1,349,108 + B158DRAFT_1302 0.34 -0.5 1,349,151 - B158DRAFT_1302 0.40 +0.5 1,349,161 + B158DRAFT_1302 0.42 +0.4 1,349,161 - B158DRAFT_1302 0.42 -0.5 1,349,169 - B158DRAFT_1302 0.43 -0.5 1,349,288 - B158DRAFT_1302 0.59 +0.4 1,349,300 + B158DRAFT_1302 0.61 -0.2 1,349,300 + B158DRAFT_1302 0.61 -0.2 1,349,300 + B158DRAFT_1302 0.61 +0.4 1,349,300 + B158DRAFT_1302 0.61 +0.4 1,349,308 - B158DRAFT_1302 0.62 -0.1 1,349,308 - B158DRAFT_1302 0.62 -0.6 1,349,347 + B158DRAFT_1302 0.68 +0.2 1,349,356 + B158DRAFT_1302 0.69 +0.1 1,349,388 - B158DRAFT_1302 0.73 -0.0 1,349,558 - +0.5 1,349,565 - -1.7 1,349,567 + +0.0 1,349,572 + -1.0 1,349,580 - -0.2 1,349,590 - +0.1 1,349,646 + -0.1 1,349,653 + -0.4 1,349,654 - -0.8 1,349,654 - +0.0 1,349,661 - +0.3 1,349,661 - -0.9 1,349,730 + +0.4 1,349,738 + -0.7 1,349,842 - B158DRAFT_1303 0.19 -0.3 1,349,888 - B158DRAFT_1303 0.25 -0.3 1,349,946 + B158DRAFT_1303 0.31 -0.1 1,349,946 + B158DRAFT_1303 0.31 -0.1 1,349,946 + B158DRAFT_1303 0.31 +0.1 1,349,949 + B158DRAFT_1303 0.32 -0.0 1,349,956 + B158DRAFT_1303 0.33 -0.2 1,349,956 + B158DRAFT_1303 0.33 -0.3 1,349,956 - B158DRAFT_1303 0.33 +0.2 1,349,956 - B158DRAFT_1303 0.33 +0.2 1,349,964 - B158DRAFT_1303 0.33 -0.3 1,349,964 - B158DRAFT_1303 0.33 +0.3 1,350,027 - B158DRAFT_1303 0.41 +0.6 1,350,036 + B158DRAFT_1303 0.42 +0.4 1,350,056 - B158DRAFT_1303 0.44 -0.7 1,350,075 - B158DRAFT_1303 0.46 -0.2 1,350,112 + B158DRAFT_1303 0.50 +0.4 1,350,146 - B158DRAFT_1303 0.54 +0.2 1,350,190 + B158DRAFT_1303 0.59 +0.1 1,350,252 - B158DRAFT_1303 0.66 +0.1 1,350,272 - B158DRAFT_1303 0.69 -0.7 1,350,338 + B158DRAFT_1303 0.76 +0.1 1,350,384 - B158DRAFT_1303 0.82 +0.3 1,350,403 - B158DRAFT_1303 0.84 -0.3
Or see this region's nucleotide sequence