Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1296 and B158DRAFT_1297 overlap by 4 nucleotides B158DRAFT_1297 and B158DRAFT_1298 are separated by 13 nucleotides B158DRAFT_1298 and B158DRAFT_1299 overlap by 13 nucleotides
B158DRAFT_1296: B158DRAFT_1296 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 1,342,582 to 1,343,367
_1296
B158DRAFT_1297: B158DRAFT_1297 - [LSU ribosomal protein L3P]-glutamine N5-methyltransferase (EC 2.1.1.-), at 1,343,364 to 1,344,278
_1297
B158DRAFT_1298: B158DRAFT_1298 - Uncharacterized protein conserved in bacteria, at 1,344,292 to 1,344,837
_1298
B158DRAFT_1299: B158DRAFT_1299 - Uncharacterized conserved protein, at 1,344,825 to 1,345,946
_1299
Position (kb)
1344
1345 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1343.303 kb on + strand at 1343.311 kb on - strand at 1343.389 kb on + strand at 1343.394 kb on + strand at 1343.397 kb on - strand at 1343.457 kb on + strand, within B158DRAFT_1297 at 1343.465 kb on - strand, within B158DRAFT_1297 at 1343.465 kb on - strand, within B158DRAFT_1297 at 1343.465 kb on - strand, within B158DRAFT_1297 at 1343.481 kb on + strand, within B158DRAFT_1297 at 1343.487 kb on + strand, within B158DRAFT_1297 at 1343.495 kb on - strand, within B158DRAFT_1297 at 1343.500 kb on - strand, within B158DRAFT_1297 at 1343.514 kb on - strand, within B158DRAFT_1297 at 1343.537 kb on + strand, within B158DRAFT_1297 at 1343.537 kb on + strand, within B158DRAFT_1297 at 1343.537 kb on + strand, within B158DRAFT_1297 at 1343.537 kb on + strand, within B158DRAFT_1297 at 1343.537 kb on + strand, within B158DRAFT_1297 at 1343.537 kb on + strand, within B158DRAFT_1297 at 1343.545 kb on - strand, within B158DRAFT_1297 at 1343.545 kb on - strand, within B158DRAFT_1297 at 1343.614 kb on + strand, within B158DRAFT_1297 at 1343.622 kb on - strand, within B158DRAFT_1297 at 1343.624 kb on + strand, within B158DRAFT_1297 at 1343.624 kb on + strand, within B158DRAFT_1297 at 1343.624 kb on + strand, within B158DRAFT_1297 at 1343.632 kb on - strand, within B158DRAFT_1297 at 1343.632 kb on - strand, within B158DRAFT_1297 at 1343.724 kb on - strand, within B158DRAFT_1297 at 1343.800 kb on + strand, within B158DRAFT_1297 at 1343.800 kb on + strand, within B158DRAFT_1297 at 1343.805 kb on + strand, within B158DRAFT_1297 at 1343.805 kb on + strand, within B158DRAFT_1297 at 1343.805 kb on + strand, within B158DRAFT_1297 at 1343.813 kb on - strand, within B158DRAFT_1297 at 1343.832 kb on - strand, within B158DRAFT_1297 at 1343.834 kb on + strand, within B158DRAFT_1297 at 1343.869 kb on + strand, within B158DRAFT_1297 at 1343.926 kb on - strand, within B158DRAFT_1297 at 1343.942 kb on + strand, within B158DRAFT_1297 at 1343.964 kb on - strand, within B158DRAFT_1297 at 1343.964 kb on - strand, within B158DRAFT_1297 at 1343.964 kb on - strand, within B158DRAFT_1297 at 1344.066 kb on + strand, within B158DRAFT_1297 at 1344.074 kb on - strand, within B158DRAFT_1297 at 1344.088 kb on - strand, within B158DRAFT_1297 at 1344.111 kb on + strand, within B158DRAFT_1297 at 1344.111 kb on + strand, within B158DRAFT_1297 at 1344.111 kb on + strand, within B158DRAFT_1297 at 1344.119 kb on - strand, within B158DRAFT_1297 at 1344.119 kb on - strand, within B158DRAFT_1297 at 1344.119 kb on - strand, within B158DRAFT_1297 at 1344.126 kb on + strand, within B158DRAFT_1297 at 1344.126 kb on + strand, within B158DRAFT_1297 at 1344.126 kb on + strand, within B158DRAFT_1297 at 1344.134 kb on - strand, within B158DRAFT_1297 at 1344.134 kb on - strand, within B158DRAFT_1297 at 1344.134 kb on - strand, within B158DRAFT_1297 at 1344.134 kb on - strand, within B158DRAFT_1297 at 1344.139 kb on - strand, within B158DRAFT_1297 at 1344.144 kb on - strand, within B158DRAFT_1297 at 1344.158 kb on + strand, within B158DRAFT_1297 at 1344.166 kb on - strand, within B158DRAFT_1297 at 1344.181 kb on - strand, within B158DRAFT_1297 at 1344.187 kb on - strand at 1344.269 kb on - strand at 1344.360 kb on + strand, within B158DRAFT_1298 at 1344.360 kb on + strand, within B158DRAFT_1298 at 1344.362 kb on + strand, within B158DRAFT_1298 at 1344.363 kb on + strand, within B158DRAFT_1298 at 1344.371 kb on - strand, within B158DRAFT_1298 at 1344.425 kb on - strand, within B158DRAFT_1298 at 1344.426 kb on - strand, within B158DRAFT_1298 at 1344.432 kb on + strand, within B158DRAFT_1298 at 1344.466 kb on + strand, within B158DRAFT_1298 at 1344.466 kb on + strand, within B158DRAFT_1298 at 1344.466 kb on + strand, within B158DRAFT_1298 at 1344.468 kb on + strand, within B158DRAFT_1298 at 1344.485 kb on + strand, within B158DRAFT_1298 at 1344.486 kb on + strand, within B158DRAFT_1298 at 1344.493 kb on - strand, within B158DRAFT_1298 at 1344.493 kb on - strand, within B158DRAFT_1298 at 1344.493 kb on - strand, within B158DRAFT_1298 at 1344.493 kb on - strand, within B158DRAFT_1298 at 1344.534 kb on + strand, within B158DRAFT_1298 at 1344.541 kb on + strand, within B158DRAFT_1298 at 1344.541 kb on + strand, within B158DRAFT_1298 at 1344.646 kb on - strand, within B158DRAFT_1298 at 1344.725 kb on + strand, within B158DRAFT_1298 at 1344.770 kb on - strand, within B158DRAFT_1298 at 1344.771 kb on + strand, within B158DRAFT_1298 at 1344.779 kb on - strand, within B158DRAFT_1298 at 1344.793 kb on + strand at 1344.793 kb on + strand at 1344.801 kb on - strand at 1344.801 kb on - strand at 1344.926 kb on - strand at 1344.948 kb on - strand, within B158DRAFT_1299 at 1345.018 kb on + strand, within B158DRAFT_1299 at 1345.077 kb on - strand, within B158DRAFT_1299 at 1345.096 kb on - strand, within B158DRAFT_1299 at 1345.103 kb on + strand, within B158DRAFT_1299 at 1345.103 kb on + strand, within B158DRAFT_1299 at 1345.106 kb on - strand, within B158DRAFT_1299 at 1345.106 kb on - strand, within B158DRAFT_1299 at 1345.106 kb on - strand, within B158DRAFT_1299 at 1345.169 kb on + strand, within B158DRAFT_1299 at 1345.209 kb on + strand, within B158DRAFT_1299 at 1345.211 kb on - strand, within B158DRAFT_1299 at 1345.212 kb on - strand, within B158DRAFT_1299 at 1345.218 kb on + strand, within B158DRAFT_1299 at 1345.270 kb on + strand, within B158DRAFT_1299 at 1345.279 kb on - strand, within B158DRAFT_1299 at 1345.319 kb on + strand, within B158DRAFT_1299 at 1345.327 kb on - strand, within B158DRAFT_1299 at 1345.336 kb on - strand, within B158DRAFT_1299 at 1345.431 kb on + strand, within B158DRAFT_1299 at 1345.460 kb on + strand, within B158DRAFT_1299 at 1345.481 kb on + strand, within B158DRAFT_1299 at 1345.489 kb on - strand, within B158DRAFT_1299 at 1345.489 kb on - strand, within B158DRAFT_1299 at 1345.492 kb on + strand, within B158DRAFT_1299 at 1345.503 kb on - strand, within B158DRAFT_1299 at 1345.550 kb on - strand, within B158DRAFT_1299 at 1345.629 kb on - strand, within B158DRAFT_1299 at 1345.630 kb on + strand, within B158DRAFT_1299 at 1345.638 kb on - strand, within B158DRAFT_1299 at 1345.654 kb on + strand, within B158DRAFT_1299 at 1345.662 kb on - strand, within B158DRAFT_1299 at 1345.662 kb on - strand, within B158DRAFT_1299 at 1345.662 kb on - strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.685 kb on + strand, within B158DRAFT_1299 at 1345.693 kb on - strand, within B158DRAFT_1299 at 1345.693 kb on - strand, within B158DRAFT_1299 at 1345.693 kb on - strand, within B158DRAFT_1299 at 1345.693 kb on - strand, within B158DRAFT_1299 at 1345.693 kb on - strand, within B158DRAFT_1299 at 1345.693 kb on - strand, within B158DRAFT_1299 at 1345.695 kb on + strand, within B158DRAFT_1299
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 1,343,303 + -0.7 1,343,311 - -1.2 1,343,389 + -1.5 1,343,394 + -2.0 1,343,397 - -1.0 1,343,457 + B158DRAFT_1297 0.10 -1.5 1,343,465 - B158DRAFT_1297 0.11 -2.1 1,343,465 - B158DRAFT_1297 0.11 -1.5 1,343,465 - B158DRAFT_1297 0.11 -0.8 1,343,481 + B158DRAFT_1297 0.13 -1.2 1,343,487 + B158DRAFT_1297 0.13 -1.0 1,343,495 - B158DRAFT_1297 0.14 -2.0 1,343,500 - B158DRAFT_1297 0.15 -1.0 1,343,514 - B158DRAFT_1297 0.16 -2.2 1,343,537 + B158DRAFT_1297 0.19 -0.8 1,343,537 + B158DRAFT_1297 0.19 -0.2 1,343,537 + B158DRAFT_1297 0.19 -0.6 1,343,537 + B158DRAFT_1297 0.19 +0.5 1,343,537 + B158DRAFT_1297 0.19 -0.6 1,343,537 + B158DRAFT_1297 0.19 -1.3 1,343,545 - B158DRAFT_1297 0.20 -1.7 1,343,545 - B158DRAFT_1297 0.20 -1.5 1,343,614 + B158DRAFT_1297 0.27 -0.5 1,343,622 - B158DRAFT_1297 0.28 -1.2 1,343,624 + B158DRAFT_1297 0.28 -1.2 1,343,624 + B158DRAFT_1297 0.28 -1.1 1,343,624 + B158DRAFT_1297 0.28 -1.4 1,343,632 - B158DRAFT_1297 0.29 -0.6 1,343,632 - B158DRAFT_1297 0.29 -0.9 1,343,724 - B158DRAFT_1297 0.39 -1.0 1,343,800 + B158DRAFT_1297 0.48 -1.9 1,343,800 + B158DRAFT_1297 0.48 -0.8 1,343,805 + B158DRAFT_1297 0.48 -1.0 1,343,805 + B158DRAFT_1297 0.48 +0.4 1,343,805 + B158DRAFT_1297 0.48 -0.7 1,343,813 - B158DRAFT_1297 0.49 -1.6 1,343,832 - B158DRAFT_1297 0.51 -1.0 1,343,834 + B158DRAFT_1297 0.51 -1.0 1,343,869 + B158DRAFT_1297 0.55 -1.2 1,343,926 - B158DRAFT_1297 0.61 -2.8 1,343,942 + B158DRAFT_1297 0.63 +0.1 1,343,964 - B158DRAFT_1297 0.66 -1.2 1,343,964 - B158DRAFT_1297 0.66 -0.8 1,343,964 - B158DRAFT_1297 0.66 -0.9 1,344,066 + B158DRAFT_1297 0.77 -0.2 1,344,074 - B158DRAFT_1297 0.78 -1.9 1,344,088 - B158DRAFT_1297 0.79 -1.8 1,344,111 + B158DRAFT_1297 0.82 +1.0 1,344,111 + B158DRAFT_1297 0.82 -1.1 1,344,111 + B158DRAFT_1297 0.82 -0.1 1,344,119 - B158DRAFT_1297 0.83 -1.1 1,344,119 - B158DRAFT_1297 0.83 -1.2 1,344,119 - B158DRAFT_1297 0.83 -0.3 1,344,126 + B158DRAFT_1297 0.83 -0.5 1,344,126 + B158DRAFT_1297 0.83 -0.4 1,344,126 + B158DRAFT_1297 0.83 -0.1 1,344,134 - B158DRAFT_1297 0.84 -1.9 1,344,134 - B158DRAFT_1297 0.84 -0.8 1,344,134 - B158DRAFT_1297 0.84 -1.0 1,344,134 - B158DRAFT_1297 0.84 -1.1 1,344,139 - B158DRAFT_1297 0.85 -1.2 1,344,144 - B158DRAFT_1297 0.85 -1.5 1,344,158 + B158DRAFT_1297 0.87 +0.5 1,344,166 - B158DRAFT_1297 0.88 -0.2 1,344,181 - B158DRAFT_1297 0.89 -1.4 1,344,187 - -0.6 1,344,269 - -0.1 1,344,360 + B158DRAFT_1298 0.12 +0.2 1,344,360 + B158DRAFT_1298 0.12 -0.4 1,344,362 + B158DRAFT_1298 0.13 -0.2 1,344,363 + B158DRAFT_1298 0.13 -0.1 1,344,371 - B158DRAFT_1298 0.14 -1.3 1,344,425 - B158DRAFT_1298 0.24 -1.7 1,344,426 - B158DRAFT_1298 0.25 -0.7 1,344,432 + B158DRAFT_1298 0.26 -0.7 1,344,466 + B158DRAFT_1298 0.32 +0.2 1,344,466 + B158DRAFT_1298 0.32 -0.8 1,344,466 + B158DRAFT_1298 0.32 -0.1 1,344,468 + B158DRAFT_1298 0.32 -0.2 1,344,485 + B158DRAFT_1298 0.35 +0.3 1,344,486 + B158DRAFT_1298 0.36 -0.1 1,344,493 - B158DRAFT_1298 0.37 -1.4 1,344,493 - B158DRAFT_1298 0.37 -2.8 1,344,493 - B158DRAFT_1298 0.37 -0.2 1,344,493 - B158DRAFT_1298 0.37 -0.6 1,344,534 + B158DRAFT_1298 0.44 -0.1 1,344,541 + B158DRAFT_1298 0.46 +0.1 1,344,541 + B158DRAFT_1298 0.46 -1.2 1,344,646 - B158DRAFT_1298 0.65 -3.0 1,344,725 + B158DRAFT_1298 0.79 -0.8 1,344,770 - B158DRAFT_1298 0.88 -2.7 1,344,771 + B158DRAFT_1298 0.88 +0.1 1,344,779 - B158DRAFT_1298 0.89 -1.6 1,344,793 + -0.1 1,344,793 + -0.5 1,344,801 - -3.5 1,344,801 - -1.2 1,344,926 - -1.0 1,344,948 - B158DRAFT_1299 0.11 -1.6 1,345,018 + B158DRAFT_1299 0.17 -1.2 1,345,077 - B158DRAFT_1299 0.22 -2.8 1,345,096 - B158DRAFT_1299 0.24 -0.7 1,345,103 + B158DRAFT_1299 0.25 -1.8 1,345,103 + B158DRAFT_1299 0.25 -2.0 1,345,106 - B158DRAFT_1299 0.25 -0.6 1,345,106 - B158DRAFT_1299 0.25 -1.1 1,345,106 - B158DRAFT_1299 0.25 -1.2 1,345,169 + B158DRAFT_1299 0.31 -1.7 1,345,209 + B158DRAFT_1299 0.34 -1.0 1,345,211 - B158DRAFT_1299 0.34 -1.5 1,345,212 - B158DRAFT_1299 0.34 -4.1 1,345,218 + B158DRAFT_1299 0.35 -1.8 1,345,270 + B158DRAFT_1299 0.40 -1.8 1,345,279 - B158DRAFT_1299 0.40 -1.8 1,345,319 + B158DRAFT_1299 0.44 -1.6 1,345,327 - B158DRAFT_1299 0.45 -1.9 1,345,336 - B158DRAFT_1299 0.46 -2.3 1,345,431 + B158DRAFT_1299 0.54 -3.0 1,345,460 + B158DRAFT_1299 0.57 -2.2 1,345,481 + B158DRAFT_1299 0.58 -0.2 1,345,489 - B158DRAFT_1299 0.59 -1.4 1,345,489 - B158DRAFT_1299 0.59 -1.6 1,345,492 + B158DRAFT_1299 0.59 -2.8 1,345,503 - B158DRAFT_1299 0.60 -2.0 1,345,550 - B158DRAFT_1299 0.65 -3.1 1,345,629 - B158DRAFT_1299 0.72 -1.2 1,345,630 + B158DRAFT_1299 0.72 -2.6 1,345,638 - B158DRAFT_1299 0.72 -1.6 1,345,654 + B158DRAFT_1299 0.74 -1.9 1,345,662 - B158DRAFT_1299 0.75 -1.8 1,345,662 - B158DRAFT_1299 0.75 -1.4 1,345,662 - B158DRAFT_1299 0.75 -0.8 1,345,685 + B158DRAFT_1299 0.77 -1.0 1,345,685 + B158DRAFT_1299 0.77 -2.2 1,345,685 + B158DRAFT_1299 0.77 -2.5 1,345,685 + B158DRAFT_1299 0.77 -1.9 1,345,685 + B158DRAFT_1299 0.77 -2.1 1,345,685 + B158DRAFT_1299 0.77 -2.5 1,345,685 + B158DRAFT_1299 0.77 -3.7 1,345,685 + B158DRAFT_1299 0.77 -4.7 1,345,685 + B158DRAFT_1299 0.77 -0.6 1,345,685 + B158DRAFT_1299 0.77 -2.9 1,345,685 + B158DRAFT_1299 0.77 -2.2 1,345,693 - B158DRAFT_1299 0.77 -2.1 1,345,693 - B158DRAFT_1299 0.77 -2.8 1,345,693 - B158DRAFT_1299 0.77 -2.5 1,345,693 - B158DRAFT_1299 0.77 -2.8 1,345,693 - B158DRAFT_1299 0.77 -1.7 1,345,693 - B158DRAFT_1299 0.77 -2.0 1,345,695 + B158DRAFT_1299 0.78 -2.5
Or see this region's nucleotide sequence