Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0162

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0160 and B158DRAFT_0161 overlap by 26 nucleotidesB158DRAFT_0161 and B158DRAFT_0162 are separated by 168 nucleotidesB158DRAFT_0162 and B158DRAFT_0163 are separated by 57 nucleotides B158DRAFT_0160: B158DRAFT_0160 - hypothetical protein, at 157,712 to 158,449 _0160 B158DRAFT_0161: B158DRAFT_0161 - hypothetical protein, at 158,424 to 159,074 _0161 B158DRAFT_0162: B158DRAFT_0162 - ribosomal protein L11 methyltransferase, at 159,243 to 160,130 _0162 B158DRAFT_0163: B158DRAFT_0163 - Protein of unknown function (DUF3426)., at 160,188 to 160,949 _0163 Position (kb) 159 160 161Strain fitness (log2 ratio) -2 -1 0 1 2at 158.255 kb on - strand, within B158DRAFT_0160at 158.263 kb on + strand, within B158DRAFT_0160at 158.299 kb on + strand, within B158DRAFT_0160at 158.314 kb on + strand, within B158DRAFT_0160at 158.360 kb on + strand, within B158DRAFT_0160at 158.360 kb on + strand, within B158DRAFT_0160at 158.440 kb on - strandat 158.512 kb on + strand, within B158DRAFT_0161at 158.512 kb on + strand, within B158DRAFT_0161at 158.512 kb on + strand, within B158DRAFT_0161at 158.512 kb on + strand, within B158DRAFT_0161at 158.512 kb on + strand, within B158DRAFT_0161at 158.512 kb on + strand, within B158DRAFT_0161at 158.520 kb on - strand, within B158DRAFT_0161at 158.520 kb on - strand, within B158DRAFT_0161at 158.520 kb on - strand, within B158DRAFT_0161at 158.520 kb on - strand, within B158DRAFT_0161at 158.520 kb on - strand, within B158DRAFT_0161at 158.520 kb on - strand, within B158DRAFT_0161at 158.611 kb on - strand, within B158DRAFT_0161at 158.656 kb on - strand, within B158DRAFT_0161at 158.685 kb on + strand, within B158DRAFT_0161at 158.752 kb on + strand, within B158DRAFT_0161at 158.752 kb on + strand, within B158DRAFT_0161at 158.760 kb on - strand, within B158DRAFT_0161at 158.971 kb on + strand, within B158DRAFT_0161at 159.025 kb on - strandat 159.058 kb on - strandat 159.298 kb on + strandat 159.368 kb on + strand, within B158DRAFT_0162at 159.375 kb on - strand, within B158DRAFT_0162at 159.419 kb on + strand, within B158DRAFT_0162at 159.454 kb on + strand, within B158DRAFT_0162at 159.459 kb on + strand, within B158DRAFT_0162at 159.462 kb on - strand, within B158DRAFT_0162at 159.467 kb on - strand, within B158DRAFT_0162at 159.495 kb on + strand, within B158DRAFT_0162at 159.596 kb on - strand, within B158DRAFT_0162at 159.606 kb on - strand, within B158DRAFT_0162at 159.651 kb on + strand, within B158DRAFT_0162at 159.697 kb on + strand, within B158DRAFT_0162at 159.774 kb on + strand, within B158DRAFT_0162at 159.907 kb on - strand, within B158DRAFT_0162at 159.928 kb on - strand, within B158DRAFT_0162at 159.948 kb on + strand, within B158DRAFT_0162at 160.156 kb on - strandat 160.161 kb on + strandat 160.169 kb on - strandat 160.169 kb on - strandat 160.220 kb on + strandat 160.220 kb on + strandat 160.220 kb on + strandat 160.228 kb on - strandat 160.228 kb on - strandat 160.228 kb on - strandat 160.400 kb on + strand, within B158DRAFT_0163at 160.405 kb on + strand, within B158DRAFT_0163at 160.405 kb on + strand, within B158DRAFT_0163at 160.405 kb on + strand, within B158DRAFT_0163at 160.405 kb on + strand, within B158DRAFT_0163at 160.405 kb on + strand, within B158DRAFT_0163at 160.405 kb on + strand, within B158DRAFT_0163at 160.405 kb on + strand, within B158DRAFT_0163at 160.405 kb on + strand, within B158DRAFT_0163at 160.405 kb on + strand, within B158DRAFT_0163at 160.408 kb on - strand, within B158DRAFT_0163at 160.413 kb on - strand, within B158DRAFT_0163at 160.413 kb on - strand, within B158DRAFT_0163at 160.413 kb on - strand, within B158DRAFT_0163at 160.413 kb on - strand, within B158DRAFT_0163at 160.413 kb on - strand, within B158DRAFT_0163at 160.413 kb on - strand, within B158DRAFT_0163at 160.413 kb on - strandat 160.458 kb on + strand, within B158DRAFT_0163at 160.463 kb on + strand, within B158DRAFT_0163at 160.466 kb on - strand, within B158DRAFT_0163at 160.466 kb on - strand, within B158DRAFT_0163at 160.468 kb on + strand, within B158DRAFT_0163at 160.476 kb on - strand, within B158DRAFT_0163at 160.476 kb on - strand, within B158DRAFT_0163at 160.513 kb on + strand, within B158DRAFT_0163at 160.521 kb on - strand, within B158DRAFT_0163at 160.521 kb on - strand, within B158DRAFT_0163at 160.551 kb on + strand, within B158DRAFT_0163at 160.559 kb on + strand, within B158DRAFT_0163at 160.564 kb on + strand, within B158DRAFT_0163at 160.574 kb on + strand, within B158DRAFT_0163at 160.582 kb on - strand, within B158DRAFT_0163at 160.628 kb on - strand, within B158DRAFT_0163at 160.628 kb on - strand, within B158DRAFT_0163at 160.628 kb on - strand, within B158DRAFT_0163at 160.630 kb on + strand, within B158DRAFT_0163at 160.630 kb on + strand, within B158DRAFT_0163at 160.630 kb on + strand, within B158DRAFT_0163at 160.630 kb on + strand, within B158DRAFT_0163at 160.630 kb on + strand, within B158DRAFT_0163at 160.630 kb on + strand, within B158DRAFT_0163at 160.638 kb on - strand, within B158DRAFT_0163at 160.638 kb on - strand, within B158DRAFT_0163at 160.638 kb on - strand, within B158DRAFT_0163at 160.638 kb on - strand, within B158DRAFT_0163at 160.638 kb on - strand, within B158DRAFT_0163at 160.638 kb on - strand, within B158DRAFT_0163at 160.725 kb on - strand, within B158DRAFT_0163at 160.730 kb on - strand, within B158DRAFT_0163at 160.784 kb on + strand, within B158DRAFT_0163at 160.814 kb on + strand, within B158DRAFT_0163at 160.819 kb on + strand, within B158DRAFT_0163at 160.819 kb on + strand, within B158DRAFT_0163at 160.819 kb on + strand, within B158DRAFT_0163at 160.822 kb on - strand, within B158DRAFT_0163at 160.824 kb on + strand, within B158DRAFT_0163at 160.824 kb on + strand, within B158DRAFT_0163at 160.827 kb on - strand, within B158DRAFT_0163at 160.829 kb on + strand, within B158DRAFT_0163at 160.832 kb on - strand, within B158DRAFT_0163at 160.854 kb on + strand, within B158DRAFT_0163at 160.854 kb on + strand, within B158DRAFT_0163at 160.862 kb on - strand, within B158DRAFT_0163at 160.862 kb on - strand, within B158DRAFT_0163at 160.862 kb on - strand, within B158DRAFT_0163at 160.881 kb on - strandat 160.906 kb on + strandat 160.906 kb on + strandat 160.906 kb on + strandat 160.906 kb on + strandat 160.906 kb on + strandat 160.906 kb on + strandat 160.906 kb on + strandat 160.914 kb on - strandat 160.914 kb on - strandat 160.914 kb on - strandat 160.914 kb on - strandat 160.914 kb on - strandat 160.914 kb on - strandat 160.914 kb on - strandat 160.914 kb on - strandat 160.916 kb on + strandat 160.924 kb on - strandat 160.985 kb on - strandat 160.990 kb on + strandat 160.996 kb on + strandat 161.017 kb on + strandat 161.044 kb on + strandat 161.044 kb on + strandat 161.044 kb on + strandat 161.044 kb on + strandat 161.044 kb on + strandat 161.044 kb on + strandat 161.052 kb on - strandat 161.052 kb on - strandat 161.052 kb on - strandat 161.052 kb on - strandat 161.052 kb on - strandat 161.052 kb on - strandat 161.052 kb on - strandat 161.088 kb on + strandat 161.093 kb on + strandat 161.096 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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158,255 - B158DRAFT_0160 0.74 +0.0
158,263 + B158DRAFT_0160 0.75 -0.1
158,299 + B158DRAFT_0160 0.80 -0.6
158,314 + B158DRAFT_0160 0.82 +0.3
158,360 + B158DRAFT_0160 0.88 -0.2
158,360 + B158DRAFT_0160 0.88 -0.2
158,440 - -1.1
158,512 + B158DRAFT_0161 0.14 +0.4
158,512 + B158DRAFT_0161 0.14 +1.0
158,512 + B158DRAFT_0161 0.14 -0.4
158,512 + B158DRAFT_0161 0.14 -0.8
158,512 + B158DRAFT_0161 0.14 -0.1
158,512 + B158DRAFT_0161 0.14 -0.5
158,520 - B158DRAFT_0161 0.15 -0.5
158,520 - B158DRAFT_0161 0.15 -0.3
158,520 - B158DRAFT_0161 0.15 -0.2
158,520 - B158DRAFT_0161 0.15 -1.3
158,520 - B158DRAFT_0161 0.15 +0.8
158,520 - B158DRAFT_0161 0.15 -0.4
158,611 - B158DRAFT_0161 0.29 -0.2
158,656 - B158DRAFT_0161 0.36 -0.2
158,685 + B158DRAFT_0161 0.40 -0.3
158,752 + B158DRAFT_0161 0.50 +0.1
158,752 + B158DRAFT_0161 0.50 +0.3
158,760 - B158DRAFT_0161 0.52 +0.6
158,971 + B158DRAFT_0161 0.84 +0.8
159,025 - -0.2
159,058 - -0.4
159,298 + -0.4
159,368 + B158DRAFT_0162 0.14 -1.3
159,375 - B158DRAFT_0162 0.15 +0.3
159,419 + B158DRAFT_0162 0.20 -0.1
159,454 + B158DRAFT_0162 0.24 -0.1
159,459 + B158DRAFT_0162 0.24 +0.0
159,462 - B158DRAFT_0162 0.25 -0.8
159,467 - B158DRAFT_0162 0.25 +0.1
159,495 + B158DRAFT_0162 0.28 +0.1
159,596 - B158DRAFT_0162 0.40 -0.4
159,606 - B158DRAFT_0162 0.41 +0.3
159,651 + B158DRAFT_0162 0.46 -0.3
159,697 + B158DRAFT_0162 0.51 -0.3
159,774 + B158DRAFT_0162 0.60 +2.2
159,907 - B158DRAFT_0162 0.75 -0.2
159,928 - B158DRAFT_0162 0.77 +0.1
159,948 + B158DRAFT_0162 0.79 -1.6
160,156 - -1.2
160,161 + +0.1
160,169 - -0.3
160,169 - -1.0
160,220 + -2.4
160,220 + +0.3
160,220 + -1.2
160,228 - +0.8
160,228 - -0.9
160,228 - -2.0
160,400 + B158DRAFT_0163 0.28 -1.3
160,405 + B158DRAFT_0163 0.28 -0.6
160,405 + B158DRAFT_0163 0.28 -0.3
160,405 + B158DRAFT_0163 0.28 +0.1
160,405 + B158DRAFT_0163 0.28 +0.2
160,405 + B158DRAFT_0163 0.28 -0.4
160,405 + B158DRAFT_0163 0.28 -0.6
160,405 + B158DRAFT_0163 0.28 +0.0
160,405 + B158DRAFT_0163 0.28 -0.5
160,405 + B158DRAFT_0163 0.28 -0.3
160,408 - B158DRAFT_0163 0.29 -0.4
160,413 - B158DRAFT_0163 0.30 -0.2
160,413 - B158DRAFT_0163 0.30 -0.7
160,413 - B158DRAFT_0163 0.30 -0.8
160,413 - B158DRAFT_0163 0.30 -0.5
160,413 - B158DRAFT_0163 0.30 +0.1
160,413 - B158DRAFT_0163 0.30 -1.1
160,413 - -0.8
160,458 + B158DRAFT_0163 0.35 -0.8
160,463 + B158DRAFT_0163 0.36 +0.2
160,466 - B158DRAFT_0163 0.36 -0.7
160,466 - B158DRAFT_0163 0.36 -0.5
160,468 + B158DRAFT_0163 0.37 -1.9
160,476 - B158DRAFT_0163 0.38 -0.1
160,476 - B158DRAFT_0163 0.38 -0.8
160,513 + B158DRAFT_0163 0.43 -0.2
160,521 - B158DRAFT_0163 0.44 -0.5
160,521 - B158DRAFT_0163 0.44 -0.7
160,551 + B158DRAFT_0163 0.48 +0.2
160,559 + B158DRAFT_0163 0.49 +0.6
160,564 + B158DRAFT_0163 0.49 -0.6
160,574 + B158DRAFT_0163 0.51 -0.7
160,582 - B158DRAFT_0163 0.52 +0.6
160,628 - B158DRAFT_0163 0.58 -0.4
160,628 - B158DRAFT_0163 0.58 -0.5
160,628 - B158DRAFT_0163 0.58 -0.2
160,630 + B158DRAFT_0163 0.58 -0.1
160,630 + B158DRAFT_0163 0.58 +0.2
160,630 + B158DRAFT_0163 0.58 -1.0
160,630 + B158DRAFT_0163 0.58 -0.2
160,630 + B158DRAFT_0163 0.58 -0.0
160,630 + B158DRAFT_0163 0.58 -0.6
160,638 - B158DRAFT_0163 0.59 +0.0
160,638 - B158DRAFT_0163 0.59 -0.7
160,638 - B158DRAFT_0163 0.59 -1.2
160,638 - B158DRAFT_0163 0.59 -0.4
160,638 - B158DRAFT_0163 0.59 -0.7
160,638 - B158DRAFT_0163 0.59 -0.4
160,725 - B158DRAFT_0163 0.70 -0.6
160,730 - B158DRAFT_0163 0.71 -0.8
160,784 + B158DRAFT_0163 0.78 -0.3
160,814 + B158DRAFT_0163 0.82 -0.4
160,819 + B158DRAFT_0163 0.83 -2.3
160,819 + B158DRAFT_0163 0.83 -0.9
160,819 + B158DRAFT_0163 0.83 +0.1
160,822 - B158DRAFT_0163 0.83 -0.3
160,824 + B158DRAFT_0163 0.83 -0.5
160,824 + B158DRAFT_0163 0.83 -0.5
160,827 - B158DRAFT_0163 0.84 -0.7
160,829 + B158DRAFT_0163 0.84 -0.6
160,832 - B158DRAFT_0163 0.85 -0.3
160,854 + B158DRAFT_0163 0.87 -0.3
160,854 + B158DRAFT_0163 0.87 -0.8
160,862 - B158DRAFT_0163 0.88 -1.0
160,862 - B158DRAFT_0163 0.88 -0.1
160,862 - B158DRAFT_0163 0.88 -1.1
160,881 - -0.5
160,906 + -0.3
160,906 + -0.6
160,906 + -0.5
160,906 + -0.8
160,906 + -0.3
160,906 + -0.1
160,906 + -2.0
160,914 - +0.1
160,914 - -0.2
160,914 - -0.8
160,914 - +0.0
160,914 - -0.5
160,914 - +0.3
160,914 - -0.7
160,914 - -0.9
160,916 + -0.0
160,924 - -0.1
160,985 - -0.5
160,990 + -0.9
160,996 + -0.0
161,017 + -0.4
161,044 + -0.5
161,044 + +0.2
161,044 + -0.0
161,044 + +0.3
161,044 + -0.2
161,044 + -0.1
161,052 - +0.2
161,052 - +0.7
161,052 - -0.4
161,052 - +0.1
161,052 - -0.1
161,052 - -0.2
161,052 - +1.2
161,088 + +0.1
161,093 + -1.1
161,096 - -0.2

Or see this region's nucleotide sequence