Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2297

Experiment: m.b. Phosphomycin 1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2295 and B158DRAFT_2296 are separated by 12 nucleotidesB158DRAFT_2296 and B158DRAFT_2297 are separated by 69 nucleotidesB158DRAFT_2297 and B158DRAFT_2298 overlap by 4 nucleotidesB158DRAFT_2298 and B158DRAFT_2299 are separated by 49 nucleotides B158DRAFT_2295: B158DRAFT_2295 - Uncharacterized conserved protein, at 459,515 to 460,579 _2295 B158DRAFT_2296: B158DRAFT_2296 - 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11), at 460,592 to 461,362 _2296 B158DRAFT_2297: B158DRAFT_2297 - protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 461,432 to 462,100 _2297 B158DRAFT_2298: B158DRAFT_2298 - Predicted membrane protein, at 462,097 to 462,681 _2298 B158DRAFT_2299: B158DRAFT_2299 - Membrane proteins related to metalloendopeptidases, at 462,731 to 463,735 _2299 Position (kb) 461 462 463Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 460.478 kb on + strandat 460.498 kb on + strandat 460.498 kb on + strandat 460.661 kb on - strandat 460.675 kb on + strand, within B158DRAFT_2296at 460.683 kb on - strand, within B158DRAFT_2296at 460.683 kb on - strand, within B158DRAFT_2296at 460.736 kb on - strand, within B158DRAFT_2296at 460.736 kb on - strand, within B158DRAFT_2296at 460.740 kb on - strand, within B158DRAFT_2296at 460.740 kb on - strand, within B158DRAFT_2296at 460.740 kb on - strand, within B158DRAFT_2296at 460.788 kb on + strand, within B158DRAFT_2296at 460.800 kb on + strand, within B158DRAFT_2296at 460.807 kb on + strand, within B158DRAFT_2296at 460.808 kb on - strand, within B158DRAFT_2296at 460.815 kb on - strand, within B158DRAFT_2296at 460.815 kb on - strand, within B158DRAFT_2296at 460.858 kb on + strand, within B158DRAFT_2296at 460.869 kb on + strand, within B158DRAFT_2296at 460.899 kb on - strand, within B158DRAFT_2296at 460.911 kb on + strand, within B158DRAFT_2296at 460.924 kb on - strand, within B158DRAFT_2296at 460.924 kb on - strand, within B158DRAFT_2296at 460.926 kb on + strand, within B158DRAFT_2296at 461.023 kb on + strand, within B158DRAFT_2296at 461.025 kb on + strand, within B158DRAFT_2296at 461.025 kb on + strand, within B158DRAFT_2296at 461.031 kb on - strand, within B158DRAFT_2296at 461.033 kb on - strand, within B158DRAFT_2296at 461.033 kb on - strand, within B158DRAFT_2296at 461.038 kb on + strand, within B158DRAFT_2296at 461.038 kb on + strand, within B158DRAFT_2296at 461.045 kb on + strand, within B158DRAFT_2296at 461.045 kb on + strand, within B158DRAFT_2296at 461.050 kb on + strand, within B158DRAFT_2296at 461.050 kb on + strandat 461.050 kb on + strand, within B158DRAFT_2296at 461.050 kb on + strand, within B158DRAFT_2296at 461.053 kb on - strand, within B158DRAFT_2296at 461.053 kb on - strand, within B158DRAFT_2296at 461.053 kb on - strand, within B158DRAFT_2296at 461.058 kb on - strand, within B158DRAFT_2296at 461.058 kb on - strand, within B158DRAFT_2296at 461.058 kb on - strand, within B158DRAFT_2296at 461.058 kb on - strand, within B158DRAFT_2296at 461.281 kb on + strand, within B158DRAFT_2296at 461.301 kb on + strandat 461.331 kb on + strandat 461.342 kb on + strandat 461.411 kb on + strandat 461.430 kb on + strandat 461.579 kb on + strand, within B158DRAFT_2297at 461.587 kb on - strand, within B158DRAFT_2297at 461.627 kb on + strand, within B158DRAFT_2297at 461.627 kb on + strand, within B158DRAFT_2297at 461.627 kb on + strand, within B158DRAFT_2297at 461.627 kb on + strand, within B158DRAFT_2297at 461.630 kb on - strand, within B158DRAFT_2297at 461.644 kb on + strand, within B158DRAFT_2297at 461.644 kb on + strand, within B158DRAFT_2297at 461.677 kb on + strand, within B158DRAFT_2297at 461.685 kb on - strand, within B158DRAFT_2297at 461.898 kb on + strand, within B158DRAFT_2297at 461.989 kb on + strand, within B158DRAFT_2297at 461.989 kb on + strand, within B158DRAFT_2297at 461.997 kb on + strand, within B158DRAFT_2297at 462.022 kb on + strand, within B158DRAFT_2297at 462.022 kb on + strand, within B158DRAFT_2297at 462.074 kb on + strandat 462.761 kb on - strandat 462.761 kb on - strandat 462.771 kb on + strandat 462.808 kb on + strandat 462.854 kb on - strand, within B158DRAFT_2299at 462.883 kb on + strand, within B158DRAFT_2299at 462.883 kb on + strand, within B158DRAFT_2299at 462.891 kb on - strand, within B158DRAFT_2299at 462.892 kb on + strand, within B158DRAFT_2299at 462.921 kb on - strand, within B158DRAFT_2299at 462.923 kb on + strand, within B158DRAFT_2299at 462.947 kb on + strand, within B158DRAFT_2299at 462.947 kb on + strand, within B158DRAFT_2299at 462.953 kb on + strand, within B158DRAFT_2299at 462.954 kb on + strand, within B158DRAFT_2299at 462.961 kb on - strand, within B158DRAFT_2299at 462.962 kb on - strand, within B158DRAFT_2299at 462.989 kb on - strand, within B158DRAFT_2299at 462.994 kb on - strand, within B158DRAFT_2299at 463.040 kb on - strand, within B158DRAFT_2299at 463.055 kb on + strand, within B158DRAFT_2299at 463.058 kb on - strand, within B158DRAFT_2299at 463.063 kb on - strand, within B158DRAFT_2299at 463.074 kb on + strand, within B158DRAFT_2299at 463.100 kb on - strand, within B158DRAFT_2299

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Phosphomycin 1 mg/ml
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460,478 + -0.3
460,498 + -0.6
460,498 + +0.4
460,661 - -0.4
460,675 + B158DRAFT_2296 0.11 -0.7
460,683 - B158DRAFT_2296 0.12 -1.2
460,683 - B158DRAFT_2296 0.12 +0.0
460,736 - B158DRAFT_2296 0.19 -1.5
460,736 - B158DRAFT_2296 0.19 -0.6
460,740 - B158DRAFT_2296 0.19 -1.4
460,740 - B158DRAFT_2296 0.19 -1.3
460,740 - B158DRAFT_2296 0.19 -2.6
460,788 + B158DRAFT_2296 0.25 -1.2
460,800 + B158DRAFT_2296 0.27 -3.0
460,807 + B158DRAFT_2296 0.28 -1.7
460,808 - B158DRAFT_2296 0.28 -1.2
460,815 - B158DRAFT_2296 0.29 -1.0
460,815 - B158DRAFT_2296 0.29 -1.6
460,858 + B158DRAFT_2296 0.35 -2.3
460,869 + B158DRAFT_2296 0.36 -1.3
460,899 - B158DRAFT_2296 0.40 -2.4
460,911 + B158DRAFT_2296 0.41 -1.9
460,924 - B158DRAFT_2296 0.43 -0.9
460,924 - B158DRAFT_2296 0.43 -1.0
460,926 + B158DRAFT_2296 0.43 -1.3
461,023 + B158DRAFT_2296 0.56 -0.9
461,025 + B158DRAFT_2296 0.56 -1.0
461,025 + B158DRAFT_2296 0.56 -2.7
461,031 - B158DRAFT_2296 0.57 -0.1
461,033 - B158DRAFT_2296 0.57 -1.5
461,033 - B158DRAFT_2296 0.57 -1.5
461,038 + B158DRAFT_2296 0.58 -0.9
461,038 + B158DRAFT_2296 0.58 -1.3
461,045 + B158DRAFT_2296 0.59 -1.6
461,045 + B158DRAFT_2296 0.59 -2.3
461,050 + B158DRAFT_2296 0.59 -1.5
461,050 + +0.9
461,050 + B158DRAFT_2296 0.59 -1.1
461,050 + B158DRAFT_2296 0.59 -0.8
461,053 - B158DRAFT_2296 0.60 -2.2
461,053 - B158DRAFT_2296 0.60 +1.2
461,053 - B158DRAFT_2296 0.60 -1.6
461,058 - B158DRAFT_2296 0.60 -0.6
461,058 - B158DRAFT_2296 0.60 -1.7
461,058 - B158DRAFT_2296 0.60 -1.4
461,058 - B158DRAFT_2296 0.60 -0.5
461,281 + B158DRAFT_2296 0.89 -0.8
461,301 + -1.8
461,331 + -1.3
461,342 + -1.5
461,411 + -0.2
461,430 + -2.5
461,579 + B158DRAFT_2297 0.22 -4.3
461,587 - B158DRAFT_2297 0.23 -4.4
461,627 + B158DRAFT_2297 0.29 -3.6
461,627 + B158DRAFT_2297 0.29 -4.1
461,627 + B158DRAFT_2297 0.29 -3.7
461,627 + B158DRAFT_2297 0.29 -3.5
461,630 - B158DRAFT_2297 0.30 -3.4
461,644 + B158DRAFT_2297 0.32 -3.3
461,644 + B158DRAFT_2297 0.32 -2.8
461,677 + B158DRAFT_2297 0.37 -4.7
461,685 - B158DRAFT_2297 0.38 -1.9
461,898 + B158DRAFT_2297 0.70 -2.7
461,989 + B158DRAFT_2297 0.83 -1.8
461,989 + B158DRAFT_2297 0.83 -2.7
461,997 + B158DRAFT_2297 0.84 -3.7
462,022 + B158DRAFT_2297 0.88 -0.4
462,022 + B158DRAFT_2297 0.88 -4.0
462,074 + -1.9
462,761 - +0.1
462,761 - +1.8
462,771 + +0.1
462,808 + -0.1
462,854 - B158DRAFT_2299 0.12 +0.1
462,883 + B158DRAFT_2299 0.15 +0.2
462,883 + B158DRAFT_2299 0.15 -0.2
462,891 - B158DRAFT_2299 0.16 -0.5
462,892 + B158DRAFT_2299 0.16 +0.7
462,921 - B158DRAFT_2299 0.19 +0.4
462,923 + B158DRAFT_2299 0.19 +0.5
462,947 + B158DRAFT_2299 0.21 +0.6
462,947 + B158DRAFT_2299 0.21 -0.3
462,953 + B158DRAFT_2299 0.22 +0.8
462,954 + B158DRAFT_2299 0.22 -0.2
462,961 - B158DRAFT_2299 0.23 -0.4
462,962 - B158DRAFT_2299 0.23 +1.7
462,989 - B158DRAFT_2299 0.26 -0.1
462,994 - B158DRAFT_2299 0.26 +0.1
463,040 - B158DRAFT_2299 0.31 -0.0
463,055 + B158DRAFT_2299 0.32 +0.2
463,058 - B158DRAFT_2299 0.33 -0.4
463,063 - B158DRAFT_2299 0.33 +0.0
463,074 + B158DRAFT_2299 0.34 +0.8
463,100 - B158DRAFT_2299 0.37 -0.4

Or see this region's nucleotide sequence