Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2216

Experiment: m.b. Phosphomycin 1 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_2215 and B158DRAFT_2216 are separated by 166 nucleotidesB158DRAFT_2216 and B158DRAFT_2217 overlap by 11 nucleotides B158DRAFT_2215: B158DRAFT_2215 - Na+/H+-dicarboxylate symporters, at 362,636 to 363,946 _2215 B158DRAFT_2216: B158DRAFT_2216 - Predicted transcriptional regulator, at 364,113 to 364,490 _2216 B158DRAFT_2217: B158DRAFT_2217 - TonB family C-terminal domain, at 364,480 to 366,510 _2217 Position (kb) 364 365Strain fitness (log2 ratio) -3 -2 -1 0 1at 363.119 kb on + strand, within B158DRAFT_2215at 363.127 kb on - strand, within B158DRAFT_2215at 363.127 kb on - strand, within B158DRAFT_2215at 363.138 kb on + strand, within B158DRAFT_2215at 363.195 kb on - strand, within B158DRAFT_2215at 363.355 kb on - strand, within B158DRAFT_2215at 363.496 kb on + strand, within B158DRAFT_2215at 363.496 kb on + strand, within B158DRAFT_2215at 363.568 kb on + strand, within B158DRAFT_2215at 363.576 kb on - strand, within B158DRAFT_2215at 363.637 kb on + strand, within B158DRAFT_2215at 363.844 kb on - strandat 363.883 kb on + strandat 363.948 kb on + strandat 363.948 kb on + strandat 364.117 kb on + strandat 364.127 kb on + strandat 364.135 kb on - strandat 364.181 kb on - strand, within B158DRAFT_2216at 364.181 kb on - strand, within B158DRAFT_2216at 364.183 kb on + strand, within B158DRAFT_2216at 364.183 kb on + strand, within B158DRAFT_2216at 364.183 kb on + strand, within B158DRAFT_2216at 364.183 kb on + strand, within B158DRAFT_2216at 364.186 kb on - strand, within B158DRAFT_2216at 364.191 kb on - strand, within B158DRAFT_2216at 364.210 kb on - strand, within B158DRAFT_2216at 364.214 kb on + strand, within B158DRAFT_2216at 364.227 kb on - strand, within B158DRAFT_2216at 364.268 kb on + strand, within B158DRAFT_2216at 364.331 kb on + strand, within B158DRAFT_2216at 364.339 kb on - strand, within B158DRAFT_2216at 364.472 kb on + strandat 364.547 kb on + strandat 364.640 kb on + strandat 364.640 kb on + strandat 364.640 kb on + strandat 364.648 kb on - strandat 364.648 kb on - strandat 364.725 kb on + strand, within B158DRAFT_2217at 364.727 kb on - strand, within B158DRAFT_2217at 364.735 kb on + strand, within B158DRAFT_2217at 364.742 kb on - strand, within B158DRAFT_2217at 364.784 kb on + strand, within B158DRAFT_2217at 364.932 kb on + strand, within B158DRAFT_2217at 364.945 kb on + strand, within B158DRAFT_2217at 364.945 kb on + strand, within B158DRAFT_2217at 364.953 kb on - strand, within B158DRAFT_2217at 364.953 kb on - strand, within B158DRAFT_2217at 365.038 kb on + strand, within B158DRAFT_2217at 365.066 kb on + strand, within B158DRAFT_2217at 365.086 kb on + strand, within B158DRAFT_2217at 365.086 kb on + strand, within B158DRAFT_2217at 365.086 kb on + strand, within B158DRAFT_2217at 365.086 kb on + strand, within B158DRAFT_2217at 365.101 kb on + strand, within B158DRAFT_2217at 365.217 kb on - strand, within B158DRAFT_2217at 365.226 kb on + strand, within B158DRAFT_2217at 365.376 kb on - strand, within B158DRAFT_2217

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Phosphomycin 1 mg/ml
remove
363,119 + B158DRAFT_2215 0.37 -0.1
363,127 - B158DRAFT_2215 0.37 -0.3
363,127 - B158DRAFT_2215 0.37 -1.8
363,138 + B158DRAFT_2215 0.38 +0.3
363,195 - B158DRAFT_2215 0.43 -0.9
363,355 - B158DRAFT_2215 0.55 -0.9
363,496 + B158DRAFT_2215 0.66 -1.1
363,496 + B158DRAFT_2215 0.66 -0.2
363,568 + B158DRAFT_2215 0.71 -1.2
363,576 - B158DRAFT_2215 0.72 -2.8
363,637 + B158DRAFT_2215 0.76 -0.6
363,844 - -0.6
363,883 + -0.3
363,948 + -1.2
363,948 + -1.0
364,117 + -0.2
364,127 + +0.5
364,135 - +0.8
364,181 - B158DRAFT_2216 0.18 +0.4
364,181 - B158DRAFT_2216 0.18 +0.5
364,183 + B158DRAFT_2216 0.19 +0.3
364,183 + B158DRAFT_2216 0.19 +0.1
364,183 + B158DRAFT_2216 0.19 +0.6
364,183 + B158DRAFT_2216 0.19 -0.5
364,186 - B158DRAFT_2216 0.19 +0.3
364,191 - B158DRAFT_2216 0.21 +0.5
364,210 - B158DRAFT_2216 0.26 +0.7
364,214 + B158DRAFT_2216 0.27 -0.0
364,227 - B158DRAFT_2216 0.30 +0.2
364,268 + B158DRAFT_2216 0.41 -0.4
364,331 + B158DRAFT_2216 0.58 +0.3
364,339 - B158DRAFT_2216 0.60 +0.7
364,472 + -1.0
364,547 + -0.2
364,640 + -0.1
364,640 + +0.3
364,640 + +0.1
364,648 - -0.1
364,648 - -0.4
364,725 + B158DRAFT_2217 0.12 -0.5
364,727 - B158DRAFT_2217 0.12 -0.4
364,735 + B158DRAFT_2217 0.13 -0.5
364,742 - B158DRAFT_2217 0.13 -0.1
364,784 + B158DRAFT_2217 0.15 -0.5
364,932 + B158DRAFT_2217 0.22 -0.1
364,945 + B158DRAFT_2217 0.23 -0.4
364,945 + B158DRAFT_2217 0.23 +0.0
364,953 - B158DRAFT_2217 0.23 -2.0
364,953 - B158DRAFT_2217 0.23 -0.4
365,038 + B158DRAFT_2217 0.27 +0.1
365,066 + B158DRAFT_2217 0.29 -0.1
365,086 + B158DRAFT_2217 0.30 +0.3
365,086 + B158DRAFT_2217 0.30 +1.0
365,086 + B158DRAFT_2217 0.30 -0.0
365,086 + B158DRAFT_2217 0.30 -0.3
365,101 + B158DRAFT_2217 0.31 -0.5
365,217 - B158DRAFT_2217 0.36 +0.1
365,226 + B158DRAFT_2217 0.37 -0.1
365,376 - B158DRAFT_2217 0.44 +0.4

Or see this region's nucleotide sequence