Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1815

Experiment: m.b. Phosphomycin 1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1813 and B158DRAFT_1814 are separated by 69 nucleotidesB158DRAFT_1814 and B158DRAFT_1815 are separated by 2 nucleotidesB158DRAFT_1815 and B158DRAFT_1816 are separated by 72 nucleotidesB158DRAFT_1816 and B158DRAFT_1817 are separated by 15 nucleotides B158DRAFT_1813: B158DRAFT_1813 - N-carbamoylputrescine amidase, at 1,913,286 to 1,914,143 _1813 B158DRAFT_1814: B158DRAFT_1814 - Predicted enzyme related to lactoylglutathione lyase, at 1,914,213 to 1,914,590 _1814 B158DRAFT_1815: B158DRAFT_1815 - Rhodanese-related sulfurtransferase, at 1,914,593 to 1,915,273 _1815 B158DRAFT_1816: B158DRAFT_1816 - tRNA_Arg_CCT, at 1,915,346 to 1,915,422 _1816 B158DRAFT_1817: B158DRAFT_1817 - seryl-tRNA synthetase (EC 6.1.1.11), at 1,915,438 to 1,916,706 _1817 Position (kb) 1914 1915 1916Strain fitness (log2 ratio) -2 -1 0 1 2at 1913.594 kb on + strand, within B158DRAFT_1813at 1913.596 kb on - strand, within B158DRAFT_1813at 1913.604 kb on + strand, within B158DRAFT_1813at 1913.695 kb on + strand, within B158DRAFT_1813at 1913.695 kb on + strand, within B158DRAFT_1813at 1913.695 kb on + strand, within B158DRAFT_1813at 1913.703 kb on + strand, within B158DRAFT_1813at 1913.703 kb on - strand, within B158DRAFT_1813at 1913.703 kb on - strand, within B158DRAFT_1813at 1913.711 kb on - strand, within B158DRAFT_1813at 1913.734 kb on - strand, within B158DRAFT_1813at 1913.748 kb on + strand, within B158DRAFT_1813at 1913.748 kb on + strand, within B158DRAFT_1813at 1913.748 kb on + strand, within B158DRAFT_1813at 1913.748 kb on + strand, within B158DRAFT_1813at 1913.756 kb on - strand, within B158DRAFT_1813at 1913.756 kb on - strand, within B158DRAFT_1813at 1913.756 kb on - strand, within B158DRAFT_1813at 1913.756 kb on - strand, within B158DRAFT_1813at 1913.756 kb on - strand, within B158DRAFT_1813at 1913.756 kb on - strand, within B158DRAFT_1813at 1913.791 kb on + strand, within B158DRAFT_1813at 1913.791 kb on + strand, within B158DRAFT_1813at 1913.791 kb on + strand, within B158DRAFT_1813at 1913.791 kb on + strand, within B158DRAFT_1813at 1913.791 kb on - strand, within B158DRAFT_1813at 1913.799 kb on - strand, within B158DRAFT_1813at 1913.799 kb on - strand, within B158DRAFT_1813at 1913.799 kb on - strand, within B158DRAFT_1813at 1913.799 kb on - strand, within B158DRAFT_1813at 1913.824 kb on + strand, within B158DRAFT_1813at 1913.824 kb on + strand, within B158DRAFT_1813at 1913.824 kb on + strand, within B158DRAFT_1813at 1913.832 kb on - strand, within B158DRAFT_1813at 1913.832 kb on - strand, within B158DRAFT_1813at 1913.832 kb on - strand, within B158DRAFT_1813at 1913.837 kb on - strand, within B158DRAFT_1813at 1913.846 kb on - strand, within B158DRAFT_1813at 1913.854 kb on + strand, within B158DRAFT_1813at 1913.856 kb on + strand, within B158DRAFT_1813at 1913.864 kb on - strand, within B158DRAFT_1813at 1913.877 kb on + strand, within B158DRAFT_1813at 1913.883 kb on + strand, within B158DRAFT_1813at 1913.885 kb on - strand, within B158DRAFT_1813at 1913.891 kb on - strand, within B158DRAFT_1813at 1913.932 kb on + strand, within B158DRAFT_1813at 1913.937 kb on + strand, within B158DRAFT_1813at 1913.940 kb on - strand, within B158DRAFT_1813at 1913.940 kb on - strand, within B158DRAFT_1813at 1913.940 kb on - strand, within B158DRAFT_1813at 1914.014 kb on - strand, within B158DRAFT_1813at 1914.034 kb on + strand, within B158DRAFT_1813at 1914.041 kb on - strand, within B158DRAFT_1813at 1914.051 kb on - strand, within B158DRAFT_1813at 1914.095 kb on + strandat 1914.095 kb on + strandat 1914.095 kb on + strandat 1914.095 kb on + strandat 1914.103 kb on - strandat 1914.103 kb on - strandat 1914.103 kb on - strandat 1914.103 kb on - strandat 1914.103 kb on - strandat 1914.104 kb on + strandat 1914.123 kb on - strandat 1914.127 kb on + strandat 1914.135 kb on - strandat 1914.188 kb on - strandat 1914.203 kb on - strandat 1914.254 kb on + strand, within B158DRAFT_1814at 1914.279 kb on + strand, within B158DRAFT_1814at 1914.279 kb on + strand, within B158DRAFT_1814at 1914.287 kb on - strand, within B158DRAFT_1814at 1914.316 kb on + strand, within B158DRAFT_1814at 1914.388 kb on - strand, within B158DRAFT_1814at 1914.484 kb on - strand, within B158DRAFT_1814at 1914.638 kb on - strandat 1914.645 kb on + strandat 1914.645 kb on + strandat 1914.645 kb on + strandat 1914.653 kb on - strandat 1914.709 kb on + strand, within B158DRAFT_1815at 1914.744 kb on + strand, within B158DRAFT_1815at 1914.772 kb on + strand, within B158DRAFT_1815at 1914.773 kb on + strand, within B158DRAFT_1815at 1914.781 kb on - strand, within B158DRAFT_1815at 1914.792 kb on - strand, within B158DRAFT_1815at 1914.896 kb on + strand, within B158DRAFT_1815at 1914.901 kb on + strand, within B158DRAFT_1815at 1914.901 kb on + strand, within B158DRAFT_1815at 1914.909 kb on - strand, within B158DRAFT_1815at 1914.925 kb on + strand, within B158DRAFT_1815at 1914.982 kb on - strand, within B158DRAFT_1815at 1914.993 kb on - strand, within B158DRAFT_1815at 1914.993 kb on - strand, within B158DRAFT_1815at 1915.031 kb on + strand, within B158DRAFT_1815at 1915.031 kb on + strand, within B158DRAFT_1815at 1915.031 kb on + strand, within B158DRAFT_1815at 1915.032 kb on - strand, within B158DRAFT_1815at 1915.040 kb on + strand, within B158DRAFT_1815at 1915.048 kb on - strand, within B158DRAFT_1815at 1915.061 kb on + strand, within B158DRAFT_1815at 1915.061 kb on + strand, within B158DRAFT_1815at 1915.077 kb on - strand, within B158DRAFT_1815at 1915.079 kb on + strand, within B158DRAFT_1815at 1915.087 kb on - strand, within B158DRAFT_1815at 1915.087 kb on - strand, within B158DRAFT_1815at 1915.156 kb on - strand, within B158DRAFT_1815at 1915.165 kb on - strand, within B158DRAFT_1815at 1915.165 kb on - strand, within B158DRAFT_1815at 1915.172 kb on + strand, within B158DRAFT_1815at 1915.173 kb on - strand, within B158DRAFT_1815at 1915.173 kb on - strand, within B158DRAFT_1815at 1915.180 kb on - strand, within B158DRAFT_1815at 1915.180 kb on - strand, within B158DRAFT_1815at 1915.327 kb on - strandat 1915.388 kb on - strand, within B158DRAFT_1816at 1915.388 kb on - strand, within B158DRAFT_1816at 1915.397 kb on + strand, within B158DRAFT_1816at 1915.405 kb on - strand, within B158DRAFT_1816at 1915.405 kb on - strand, within B158DRAFT_1816at 1915.408 kb on - strand, within B158DRAFT_1816at 1915.453 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Phosphomycin 1 mg/ml
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1,913,594 + B158DRAFT_1813 0.36 +0.2
1,913,596 - B158DRAFT_1813 0.36 -0.4
1,913,604 + B158DRAFT_1813 0.37 -0.7
1,913,695 + B158DRAFT_1813 0.48 +0.3
1,913,695 + B158DRAFT_1813 0.48 -0.0
1,913,695 + B158DRAFT_1813 0.48 +0.2
1,913,703 + B158DRAFT_1813 0.49 -1.1
1,913,703 - B158DRAFT_1813 0.49 -0.6
1,913,703 - B158DRAFT_1813 0.49 -0.4
1,913,711 - B158DRAFT_1813 0.50 +0.6
1,913,734 - B158DRAFT_1813 0.52 -0.4
1,913,748 + B158DRAFT_1813 0.54 -0.0
1,913,748 + B158DRAFT_1813 0.54 -0.8
1,913,748 + B158DRAFT_1813 0.54 +0.2
1,913,748 + B158DRAFT_1813 0.54 +0.0
1,913,756 - B158DRAFT_1813 0.55 -0.2
1,913,756 - B158DRAFT_1813 0.55 -0.4
1,913,756 - B158DRAFT_1813 0.55 +0.1
1,913,756 - B158DRAFT_1813 0.55 -0.5
1,913,756 - B158DRAFT_1813 0.55 -0.1
1,913,756 - B158DRAFT_1813 0.55 -0.2
1,913,791 + B158DRAFT_1813 0.59 +0.2
1,913,791 + B158DRAFT_1813 0.59 +0.8
1,913,791 + B158DRAFT_1813 0.59 +0.2
1,913,791 + B158DRAFT_1813 0.59 -0.7
1,913,791 - B158DRAFT_1813 0.59 -0.1
1,913,799 - B158DRAFT_1813 0.60 -0.4
1,913,799 - B158DRAFT_1813 0.60 +0.2
1,913,799 - B158DRAFT_1813 0.60 -0.6
1,913,799 - B158DRAFT_1813 0.60 -0.2
1,913,824 + B158DRAFT_1813 0.63 +2.2
1,913,824 + B158DRAFT_1813 0.63 +0.2
1,913,824 + B158DRAFT_1813 0.63 -0.4
1,913,832 - B158DRAFT_1813 0.64 +0.4
1,913,832 - B158DRAFT_1813 0.64 -0.5
1,913,832 - B158DRAFT_1813 0.64 -0.2
1,913,837 - B158DRAFT_1813 0.64 -0.3
1,913,846 - B158DRAFT_1813 0.65 -1.0
1,913,854 + B158DRAFT_1813 0.66 -0.6
1,913,856 + B158DRAFT_1813 0.66 -0.7
1,913,864 - B158DRAFT_1813 0.67 -1.0
1,913,877 + B158DRAFT_1813 0.69 +0.1
1,913,883 + B158DRAFT_1813 0.70 -0.5
1,913,885 - B158DRAFT_1813 0.70 -0.8
1,913,891 - B158DRAFT_1813 0.71 +0.3
1,913,932 + B158DRAFT_1813 0.75 +0.8
1,913,937 + B158DRAFT_1813 0.76 -0.6
1,913,940 - B158DRAFT_1813 0.76 -0.9
1,913,940 - B158DRAFT_1813 0.76 -1.3
1,913,940 - B158DRAFT_1813 0.76 -0.1
1,914,014 - B158DRAFT_1813 0.85 -0.5
1,914,034 + B158DRAFT_1813 0.87 -0.7
1,914,041 - B158DRAFT_1813 0.88 -0.8
1,914,051 - B158DRAFT_1813 0.89 -0.3
1,914,095 + -0.6
1,914,095 + +0.3
1,914,095 + -0.6
1,914,095 + +0.1
1,914,103 - +0.1
1,914,103 - -0.4
1,914,103 - -1.9
1,914,103 - -0.1
1,914,103 - -0.9
1,914,104 + -1.0
1,914,123 - -1.5
1,914,127 + -0.8
1,914,135 - -0.3
1,914,188 - -0.4
1,914,203 - +0.1
1,914,254 + B158DRAFT_1814 0.11 +0.3
1,914,279 + B158DRAFT_1814 0.17 -0.1
1,914,279 + B158DRAFT_1814 0.17 -0.1
1,914,287 - B158DRAFT_1814 0.20 -0.2
1,914,316 + B158DRAFT_1814 0.27 +0.1
1,914,388 - B158DRAFT_1814 0.46 +0.6
1,914,484 - B158DRAFT_1814 0.72 +0.4
1,914,638 - +0.2
1,914,645 + -1.4
1,914,645 + +0.5
1,914,645 + -0.2
1,914,653 - -0.6
1,914,709 + B158DRAFT_1815 0.17 +0.3
1,914,744 + B158DRAFT_1815 0.22 -0.1
1,914,772 + B158DRAFT_1815 0.26 +0.2
1,914,773 + B158DRAFT_1815 0.26 -0.3
1,914,781 - B158DRAFT_1815 0.28 +0.4
1,914,792 - B158DRAFT_1815 0.29 +0.2
1,914,896 + B158DRAFT_1815 0.44 +0.1
1,914,901 + B158DRAFT_1815 0.45 +0.1
1,914,901 + B158DRAFT_1815 0.45 +1.6
1,914,909 - B158DRAFT_1815 0.46 +0.2
1,914,925 + B158DRAFT_1815 0.49 -0.2
1,914,982 - B158DRAFT_1815 0.57 -0.2
1,914,993 - B158DRAFT_1815 0.59 +0.5
1,914,993 - B158DRAFT_1815 0.59 -0.2
1,915,031 + B158DRAFT_1815 0.64 -0.5
1,915,031 + B158DRAFT_1815 0.64 -0.3
1,915,031 + B158DRAFT_1815 0.64 +0.3
1,915,032 - B158DRAFT_1815 0.64 -0.1
1,915,040 + B158DRAFT_1815 0.66 +0.2
1,915,048 - B158DRAFT_1815 0.67 -0.0
1,915,061 + B158DRAFT_1815 0.69 +0.2
1,915,061 + B158DRAFT_1815 0.69 -0.6
1,915,077 - B158DRAFT_1815 0.71 -0.0
1,915,079 + B158DRAFT_1815 0.71 +0.6
1,915,087 - B158DRAFT_1815 0.73 +0.2
1,915,087 - B158DRAFT_1815 0.73 +0.2
1,915,156 - B158DRAFT_1815 0.83 +0.4
1,915,165 - B158DRAFT_1815 0.84 -0.4
1,915,165 - B158DRAFT_1815 0.84 -0.4
1,915,172 + B158DRAFT_1815 0.85 -0.1
1,915,173 - B158DRAFT_1815 0.85 -0.1
1,915,173 - B158DRAFT_1815 0.85 +0.1
1,915,180 - B158DRAFT_1815 0.86 -0.6
1,915,180 - B158DRAFT_1815 0.86 -0.4
1,915,327 - -0.1
1,915,388 - B158DRAFT_1816 0.55 +0.9
1,915,388 - B158DRAFT_1816 0.55 -0.1
1,915,397 + B158DRAFT_1816 0.66 -0.2
1,915,405 - B158DRAFT_1816 0.77 -0.3
1,915,405 - B158DRAFT_1816 0.77 -0.3
1,915,408 - B158DRAFT_1816 0.81 +0.2
1,915,453 + -0.5

Or see this region's nucleotide sequence