Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1151

Experiment: m.b. Phosphomycin 1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1149 and B158DRAFT_1150 are separated by 136 nucleotidesB158DRAFT_1150 and B158DRAFT_1151 are separated by 3 nucleotidesB158DRAFT_1151 and B158DRAFT_1152 are separated by 47 nucleotides B158DRAFT_1149: B158DRAFT_1149 - 23S rRNA m2A2503 methyltransferase, at 1,184,771 to 1,185,895 _1149 B158DRAFT_1150: B158DRAFT_1150 - type IV pilus biogenesis/stability protein PilW, at 1,186,032 to 1,186,823 _1150 B158DRAFT_1151: B158DRAFT_1151 - Uncharacterized protein conserved in bacteria, at 1,186,827 to 1,187,777 _1151 B158DRAFT_1152: B158DRAFT_1152 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.4.3), at 1,187,825 to 1,188,964 _1152 Position (kb) 1186 1187 1188Strain fitness (log2 ratio) -2 -1 0 1at 1185.837 kb on - strandat 1185.837 kb on - strandat 1185.846 kb on + strandat 1185.918 kb on - strandat 1185.920 kb on + strandat 1185.920 kb on + strandat 1185.920 kb on + strandat 1185.920 kb on + strandat 1185.920 kb on + strandat 1185.920 kb on + strandat 1185.928 kb on - strandat 1185.938 kb on - strandat 1185.938 kb on - strandat 1186.145 kb on - strand, within B158DRAFT_1150at 1186.178 kb on + strand, within B158DRAFT_1150at 1186.225 kb on + strand, within B158DRAFT_1150at 1186.296 kb on - strand, within B158DRAFT_1150at 1186.301 kb on + strand, within B158DRAFT_1150at 1186.322 kb on + strand, within B158DRAFT_1150at 1186.382 kb on + strand, within B158DRAFT_1150at 1186.389 kb on - strand, within B158DRAFT_1150at 1186.389 kb on - strand, within B158DRAFT_1150at 1186.437 kb on + strand, within B158DRAFT_1150at 1186.581 kb on + strand, within B158DRAFT_1150at 1186.619 kb on - strand, within B158DRAFT_1150at 1186.678 kb on - strand, within B158DRAFT_1150at 1186.726 kb on + strand, within B158DRAFT_1150at 1186.775 kb on + strandat 1186.900 kb on - strandat 1186.968 kb on + strand, within B158DRAFT_1151at 1186.987 kb on + strand, within B158DRAFT_1151at 1186.987 kb on + strand, within B158DRAFT_1151at 1186.987 kb on + strand, within B158DRAFT_1151at 1186.987 kb on + strand, within B158DRAFT_1151at 1186.995 kb on - strand, within B158DRAFT_1151at 1187.183 kb on - strand, within B158DRAFT_1151at 1187.264 kb on - strand, within B158DRAFT_1151at 1187.299 kb on - strand, within B158DRAFT_1151at 1187.301 kb on + strand, within B158DRAFT_1151at 1187.301 kb on + strand, within B158DRAFT_1151at 1187.359 kb on + strand, within B158DRAFT_1151at 1187.359 kb on + strand, within B158DRAFT_1151at 1187.361 kb on + strand, within B158DRAFT_1151at 1187.367 kb on - strand, within B158DRAFT_1151at 1187.369 kb on - strand, within B158DRAFT_1151at 1187.373 kb on + strand, within B158DRAFT_1151at 1187.385 kb on + strand, within B158DRAFT_1151at 1187.388 kb on - strand, within B158DRAFT_1151at 1187.395 kb on + strand, within B158DRAFT_1151at 1187.395 kb on + strand, within B158DRAFT_1151at 1187.395 kb on + strand, within B158DRAFT_1151at 1187.395 kb on + strand, within B158DRAFT_1151at 1187.395 kb on + strand, within B158DRAFT_1151at 1187.396 kb on - strand, within B158DRAFT_1151at 1187.403 kb on - strand, within B158DRAFT_1151at 1187.403 kb on - strand, within B158DRAFT_1151at 1187.403 kb on - strand, within B158DRAFT_1151at 1187.403 kb on - strand, within B158DRAFT_1151at 1187.408 kb on - strand, within B158DRAFT_1151at 1187.428 kb on + strand, within B158DRAFT_1151at 1187.436 kb on - strand, within B158DRAFT_1151at 1187.442 kb on - strand, within B158DRAFT_1151at 1187.519 kb on + strand, within B158DRAFT_1151at 1187.519 kb on + strand, within B158DRAFT_1151at 1187.519 kb on + strand, within B158DRAFT_1151at 1187.527 kb on - strand, within B158DRAFT_1151at 1187.527 kb on - strand, within B158DRAFT_1151at 1187.527 kb on - strand, within B158DRAFT_1151at 1187.552 kb on - strand, within B158DRAFT_1151at 1187.552 kb on - strand, within B158DRAFT_1151at 1187.581 kb on + strand, within B158DRAFT_1151at 1187.581 kb on + strand, within B158DRAFT_1151at 1187.589 kb on - strand, within B158DRAFT_1151at 1187.653 kb on + strand, within B158DRAFT_1151at 1187.661 kb on - strand, within B158DRAFT_1151at 1187.661 kb on - strand, within B158DRAFT_1151at 1187.684 kb on + strandat 1187.684 kb on + strandat 1187.684 kb on + strandat 1187.686 kb on - strandat 1187.692 kb on - strandat 1187.692 kb on - strandat 1187.692 kb on - strandat 1187.692 kb on - strandat 1187.692 kb on - strandat 1187.707 kb on + strandat 1187.757 kb on + strandat 1187.785 kb on + strandat 1187.785 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Phosphomycin 1 mg/ml
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1,185,837 - -0.4
1,185,837 - +0.2
1,185,846 + -0.1
1,185,918 - -0.7
1,185,920 + -0.6
1,185,920 + +0.5
1,185,920 + +0.5
1,185,920 + +0.1
1,185,920 + -1.2
1,185,920 + -0.4
1,185,928 - +0.2
1,185,938 - +0.2
1,185,938 - +0.5
1,186,145 - B158DRAFT_1150 0.14 -0.3
1,186,178 + B158DRAFT_1150 0.18 +0.5
1,186,225 + B158DRAFT_1150 0.24 -1.4
1,186,296 - B158DRAFT_1150 0.33 +0.1
1,186,301 + B158DRAFT_1150 0.34 +0.2
1,186,322 + B158DRAFT_1150 0.37 +0.2
1,186,382 + B158DRAFT_1150 0.44 -0.1
1,186,389 - B158DRAFT_1150 0.45 -1.4
1,186,389 - B158DRAFT_1150 0.45 -0.8
1,186,437 + B158DRAFT_1150 0.51 +0.7
1,186,581 + B158DRAFT_1150 0.69 +0.9
1,186,619 - B158DRAFT_1150 0.74 +1.1
1,186,678 - B158DRAFT_1150 0.82 +1.2
1,186,726 + B158DRAFT_1150 0.88 +1.3
1,186,775 + +0.1
1,186,900 - -0.1
1,186,968 + B158DRAFT_1151 0.15 +0.4
1,186,987 + B158DRAFT_1151 0.17 -1.1
1,186,987 + B158DRAFT_1151 0.17 -1.0
1,186,987 + B158DRAFT_1151 0.17 -0.3
1,186,987 + B158DRAFT_1151 0.17 -1.6
1,186,995 - B158DRAFT_1151 0.18 -0.3
1,187,183 - B158DRAFT_1151 0.37 -0.0
1,187,264 - B158DRAFT_1151 0.46 -0.3
1,187,299 - B158DRAFT_1151 0.50 -0.0
1,187,301 + B158DRAFT_1151 0.50 -0.3
1,187,301 + B158DRAFT_1151 0.50 -0.3
1,187,359 + B158DRAFT_1151 0.56 +0.9
1,187,359 + B158DRAFT_1151 0.56 +0.8
1,187,361 + B158DRAFT_1151 0.56 -0.7
1,187,367 - B158DRAFT_1151 0.57 -1.1
1,187,369 - B158DRAFT_1151 0.57 -0.6
1,187,373 + B158DRAFT_1151 0.57 -0.6
1,187,385 + B158DRAFT_1151 0.59 -0.1
1,187,388 - B158DRAFT_1151 0.59 -2.2
1,187,395 + B158DRAFT_1151 0.60 +0.2
1,187,395 + B158DRAFT_1151 0.60 -0.5
1,187,395 + B158DRAFT_1151 0.60 -0.4
1,187,395 + B158DRAFT_1151 0.60 +0.5
1,187,395 + B158DRAFT_1151 0.60 -0.3
1,187,396 - B158DRAFT_1151 0.60 +0.2
1,187,403 - B158DRAFT_1151 0.61 -0.4
1,187,403 - B158DRAFT_1151 0.61 -0.2
1,187,403 - B158DRAFT_1151 0.61 +0.0
1,187,403 - B158DRAFT_1151 0.61 -0.3
1,187,408 - B158DRAFT_1151 0.61 -1.0
1,187,428 + B158DRAFT_1151 0.63 -1.4
1,187,436 - B158DRAFT_1151 0.64 +0.1
1,187,442 - B158DRAFT_1151 0.65 -1.2
1,187,519 + B158DRAFT_1151 0.73 -0.1
1,187,519 + B158DRAFT_1151 0.73 -1.7
1,187,519 + B158DRAFT_1151 0.73 -0.9
1,187,527 - B158DRAFT_1151 0.74 -1.0
1,187,527 - B158DRAFT_1151 0.74 -0.4
1,187,527 - B158DRAFT_1151 0.74 -0.1
1,187,552 - B158DRAFT_1151 0.76 -1.6
1,187,552 - B158DRAFT_1151 0.76 -0.6
1,187,581 + B158DRAFT_1151 0.79 -0.3
1,187,581 + B158DRAFT_1151 0.79 -0.6
1,187,589 - B158DRAFT_1151 0.80 -0.7
1,187,653 + B158DRAFT_1151 0.87 -1.1
1,187,661 - B158DRAFT_1151 0.88 -1.3
1,187,661 - B158DRAFT_1151 0.88 -1.2
1,187,684 + -0.1
1,187,684 + -0.8
1,187,684 + -0.3
1,187,686 - -1.7
1,187,692 - -1.6
1,187,692 - -0.4
1,187,692 - -1.4
1,187,692 - -1.6
1,187,692 - -1.3
1,187,707 + -0.4
1,187,757 + -2.0
1,187,785 + -1.8
1,187,785 + -0.0

Or see this region's nucleotide sequence