Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2527

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2525 and B158DRAFT_2526 are separated by 94 nucleotidesB158DRAFT_2526 and B158DRAFT_2527 are separated by 136 nucleotidesB158DRAFT_2527 and B158DRAFT_2528 are separated by 22 nucleotides B158DRAFT_2525: B158DRAFT_2525 - Predicted Rossmann fold nucleotide-binding protein, at 713,840 to 715,228 _2525 B158DRAFT_2526: B158DRAFT_2526 - Tfp pilus assembly protein FimT, at 715,323 to 715,874 _2526 B158DRAFT_2527: B158DRAFT_2527 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 716,011 to 717,339 _2527 B158DRAFT_2528: B158DRAFT_2528 - His Kinase A (phospho-acceptor) domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, at 717,362 to 719,023 _2528 Position (kb) 716 717 718Strain fitness (log2 ratio) -1 0 1at 715.130 kb on - strandat 715.156 kb on + strandat 715.164 kb on - strandat 715.217 kb on - strandat 715.408 kb on + strand, within B158DRAFT_2526at 715.416 kb on - strand, within B158DRAFT_2526at 715.426 kb on - strand, within B158DRAFT_2526at 715.537 kb on - strand, within B158DRAFT_2526at 715.612 kb on - strand, within B158DRAFT_2526at 715.896 kb on - strandat 715.936 kb on - strandat 716.183 kb on + strand, within B158DRAFT_2527at 716.287 kb on - strand, within B158DRAFT_2527at 716.413 kb on + strand, within B158DRAFT_2527at 716.421 kb on - strand, within B158DRAFT_2527at 716.505 kb on - strand, within B158DRAFT_2527at 716.571 kb on + strand, within B158DRAFT_2527at 716.579 kb on - strand, within B158DRAFT_2527at 716.649 kb on - strand, within B158DRAFT_2527at 716.733 kb on - strand, within B158DRAFT_2527at 716.878 kb on - strand, within B158DRAFT_2527at 717.003 kb on + strand, within B158DRAFT_2527at 717.166 kb on + strand, within B158DRAFT_2527at 717.166 kb on + strand, within B158DRAFT_2527at 717.231 kb on - strandat 717.318 kb on - strandat 717.496 kb on - strandat 717.530 kb on + strand, within B158DRAFT_2528at 717.568 kb on + strand, within B158DRAFT_2528at 717.568 kb on + strand, within B158DRAFT_2528at 717.568 kb on + strand, within B158DRAFT_2528at 717.576 kb on - strand, within B158DRAFT_2528at 717.576 kb on - strand, within B158DRAFT_2528at 717.589 kb on + strand, within B158DRAFT_2528at 717.640 kb on + strand, within B158DRAFT_2528at 717.641 kb on + strand, within B158DRAFT_2528at 717.791 kb on - strand, within B158DRAFT_2528at 717.804 kb on + strand, within B158DRAFT_2528at 717.850 kb on + strand, within B158DRAFT_2528at 717.858 kb on - strand, within B158DRAFT_2528at 717.858 kb on - strand, within B158DRAFT_2528at 717.858 kb on - strand, within B158DRAFT_2528at 717.858 kb on - strand, within B158DRAFT_2528at 717.901 kb on + strand, within B158DRAFT_2528at 717.917 kb on + strand, within B158DRAFT_2528at 717.917 kb on + strand, within B158DRAFT_2528at 717.925 kb on - strand, within B158DRAFT_2528at 718.057 kb on + strand, within B158DRAFT_2528at 718.057 kb on + strand, within B158DRAFT_2528at 718.065 kb on - strand, within B158DRAFT_2528at 718.067 kb on + strand, within B158DRAFT_2528at 718.067 kb on + strand, within B158DRAFT_2528at 718.075 kb on - strand, within B158DRAFT_2528at 718.111 kb on + strand, within B158DRAFT_2528at 718.111 kb on + strand, within B158DRAFT_2528at 718.111 kb on - strand, within B158DRAFT_2528at 718.114 kb on - strand, within B158DRAFT_2528at 718.119 kb on - strand, within B158DRAFT_2528at 718.133 kb on + strand, within B158DRAFT_2528at 718.138 kb on + strand, within B158DRAFT_2528at 718.153 kb on + strand, within B158DRAFT_2528at 718.161 kb on - strand, within B158DRAFT_2528at 718.174 kb on + strand, within B158DRAFT_2528

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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715,130 - -0.2
715,156 + -0.2
715,164 - -0.2
715,217 - -0.4
715,408 + B158DRAFT_2526 0.15 +0.3
715,416 - B158DRAFT_2526 0.17 -0.1
715,426 - B158DRAFT_2526 0.19 +0.5
715,537 - B158DRAFT_2526 0.39 +0.1
715,612 - B158DRAFT_2526 0.52 -0.1
715,896 - -0.3
715,936 - +0.1
716,183 + B158DRAFT_2527 0.13 +0.3
716,287 - B158DRAFT_2527 0.21 -0.5
716,413 + B158DRAFT_2527 0.30 -0.3
716,421 - B158DRAFT_2527 0.31 -0.1
716,505 - B158DRAFT_2527 0.37 +0.1
716,571 + B158DRAFT_2527 0.42 -0.1
716,579 - B158DRAFT_2527 0.43 -0.1
716,649 - B158DRAFT_2527 0.48 +0.0
716,733 - B158DRAFT_2527 0.54 -0.8
716,878 - B158DRAFT_2527 0.65 +0.2
717,003 + B158DRAFT_2527 0.75 +0.1
717,166 + B158DRAFT_2527 0.87 -0.0
717,166 + B158DRAFT_2527 0.87 +0.6
717,231 - -0.1
717,318 - +0.1
717,496 - +0.5
717,530 + B158DRAFT_2528 0.10 +0.3
717,568 + B158DRAFT_2528 0.12 +0.9
717,568 + B158DRAFT_2528 0.12 +0.7
717,568 + B158DRAFT_2528 0.12 +0.4
717,576 - B158DRAFT_2528 0.13 +0.5
717,576 - B158DRAFT_2528 0.13 -0.5
717,589 + B158DRAFT_2528 0.14 +0.4
717,640 + B158DRAFT_2528 0.17 +0.7
717,641 + B158DRAFT_2528 0.17 +0.6
717,791 - B158DRAFT_2528 0.26 +0.7
717,804 + B158DRAFT_2528 0.27 +0.1
717,850 + B158DRAFT_2528 0.29 -0.0
717,858 - B158DRAFT_2528 0.30 +0.4
717,858 - B158DRAFT_2528 0.30 +0.5
717,858 - B158DRAFT_2528 0.30 +1.1
717,858 - B158DRAFT_2528 0.30 +0.5
717,901 + B158DRAFT_2528 0.32 +0.3
717,917 + B158DRAFT_2528 0.33 +0.5
717,917 + B158DRAFT_2528 0.33 +1.0
717,925 - B158DRAFT_2528 0.34 +0.9
718,057 + B158DRAFT_2528 0.42 +0.7
718,057 + B158DRAFT_2528 0.42 +0.5
718,065 - B158DRAFT_2528 0.42 +1.2
718,067 + B158DRAFT_2528 0.42 -0.9
718,067 + B158DRAFT_2528 0.42 +1.1
718,075 - B158DRAFT_2528 0.43 +0.5
718,111 + B158DRAFT_2528 0.45 +0.1
718,111 + B158DRAFT_2528 0.45 +0.8
718,111 - B158DRAFT_2528 0.45 +0.8
718,114 - B158DRAFT_2528 0.45 +0.1
718,119 - B158DRAFT_2528 0.46 -0.9
718,133 + B158DRAFT_2528 0.46 +0.0
718,138 + B158DRAFT_2528 0.47 +0.6
718,153 + B158DRAFT_2528 0.48 +0.4
718,161 - B158DRAFT_2528 0.48 +0.4
718,174 + B158DRAFT_2528 0.49 +0.4

Or see this region's nucleotide sequence