Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2524

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2523 and B158DRAFT_2524 are separated by 62 nucleotidesB158DRAFT_2524 and B158DRAFT_2525 are separated by 12 nucleotides B158DRAFT_2523: B158DRAFT_2523 - Periplasmic protease, at 711,795 to 713,192 _2523 B158DRAFT_2524: B158DRAFT_2524 - transcriptional regulator, TetR family, at 713,255 to 713,827 _2524 B158DRAFT_2525: B158DRAFT_2525 - Predicted Rossmann fold nucleotide-binding protein, at 713,840 to 715,228 _2525 Position (kb) 713 714Strain fitness (log2 ratio) -1 0 1 2 3at 712.299 kb on + strand, within B158DRAFT_2523at 712.299 kb on + strand, within B158DRAFT_2523at 712.306 kb on - strand, within B158DRAFT_2523at 712.307 kb on - strand, within B158DRAFT_2523at 712.307 kb on - strand, within B158DRAFT_2523at 712.325 kb on - strand, within B158DRAFT_2523at 712.342 kb on - strand, within B158DRAFT_2523at 712.370 kb on + strand, within B158DRAFT_2523at 712.402 kb on + strand, within B158DRAFT_2523at 712.476 kb on + strand, within B158DRAFT_2523at 712.481 kb on + strand, within B158DRAFT_2523at 712.481 kb on + strand, within B158DRAFT_2523at 712.576 kb on - strand, within B158DRAFT_2523at 712.589 kb on - strand, within B158DRAFT_2523at 712.613 kb on + strand, within B158DRAFT_2523at 712.620 kb on - strand, within B158DRAFT_2523at 712.666 kb on + strand, within B158DRAFT_2523at 712.674 kb on - strand, within B158DRAFT_2523at 712.747 kb on - strand, within B158DRAFT_2523at 712.781 kb on + strand, within B158DRAFT_2523at 712.802 kb on + strand, within B158DRAFT_2523at 712.860 kb on + strand, within B158DRAFT_2523at 712.877 kb on + strand, within B158DRAFT_2523at 712.931 kb on + strand, within B158DRAFT_2523at 712.946 kb on + strand, within B158DRAFT_2523at 712.954 kb on + strand, within B158DRAFT_2523at 712.956 kb on + strand, within B158DRAFT_2523at 712.956 kb on + strand, within B158DRAFT_2523at 712.956 kb on + strand, within B158DRAFT_2523at 712.956 kb on + strand, within B158DRAFT_2523at 712.956 kb on + strand, within B158DRAFT_2523at 712.964 kb on - strand, within B158DRAFT_2523at 712.964 kb on - strand, within B158DRAFT_2523at 712.964 kb on - strand, within B158DRAFT_2523at 712.964 kb on - strand, within B158DRAFT_2523at 712.964 kb on - strand, within B158DRAFT_2523at 712.964 kb on - strand, within B158DRAFT_2523at 712.973 kb on - strand, within B158DRAFT_2523at 712.997 kb on + strand, within B158DRAFT_2523at 712.997 kb on + strand, within B158DRAFT_2523at 713.005 kb on - strand, within B158DRAFT_2523at 713.019 kb on + strand, within B158DRAFT_2523at 713.019 kb on + strand, within B158DRAFT_2523at 713.027 kb on - strand, within B158DRAFT_2523at 713.027 kb on - strand, within B158DRAFT_2523at 713.053 kb on + strandat 713.071 kb on - strandat 713.142 kb on + strandat 713.150 kb on - strandat 713.163 kb on - strandat 713.296 kb on + strandat 713.296 kb on + strandat 713.304 kb on - strandat 713.349 kb on - strand, within B158DRAFT_2524at 713.422 kb on - strand, within B158DRAFT_2524at 713.444 kb on - strand, within B158DRAFT_2524at 713.449 kb on - strand, within B158DRAFT_2524at 713.454 kb on - strand, within B158DRAFT_2524at 713.463 kb on - strand, within B158DRAFT_2524at 713.595 kb on - strand, within B158DRAFT_2524at 713.606 kb on + strand, within B158DRAFT_2524at 713.614 kb on - strand, within B158DRAFT_2524at 713.614 kb on - strand, within B158DRAFT_2524at 713.700 kb on + strand, within B158DRAFT_2524at 713.727 kb on + strand, within B158DRAFT_2524at 713.735 kb on - strand, within B158DRAFT_2524at 713.735 kb on - strand, within B158DRAFT_2524at 713.772 kb on + strandat 713.839 kb on - strandat 713.848 kb on + strandat 713.860 kb on + strandat 713.860 kb on + strandat 713.860 kb on + strandat 713.868 kb on - strandat 713.869 kb on - strandat 713.907 kb on + strandat 713.957 kb on + strandat 713.964 kb on + strandat 713.972 kb on - strandat 713.972 kb on - strandat 713.972 kb on - strandat 714.070 kb on - strand, within B158DRAFT_2525at 714.070 kb on - strand, within B158DRAFT_2525at 714.079 kb on + strand, within B158DRAFT_2525at 714.087 kb on - strand, within B158DRAFT_2525at 714.103 kb on - strand, within B158DRAFT_2525at 714.109 kb on + strand, within B158DRAFT_2525at 714.117 kb on - strand, within B158DRAFT_2525at 714.128 kb on + strand, within B158DRAFT_2525at 714.134 kb on + strand, within B158DRAFT_2525at 714.136 kb on - strand, within B158DRAFT_2525at 714.205 kb on + strand, within B158DRAFT_2525at 714.229 kb on - strand, within B158DRAFT_2525at 714.271 kb on + strand, within B158DRAFT_2525at 714.271 kb on + strand, within B158DRAFT_2525at 714.271 kb on + strand, within B158DRAFT_2525at 714.285 kb on - strand, within B158DRAFT_2525at 714.339 kb on - strand, within B158DRAFT_2525at 714.339 kb on - strand, within B158DRAFT_2525at 714.398 kb on + strand, within B158DRAFT_2525at 714.430 kb on - strand, within B158DRAFT_2525at 714.430 kb on - strand, within B158DRAFT_2525at 714.449 kb on + strand, within B158DRAFT_2525at 714.449 kb on + strand, within B158DRAFT_2525at 714.449 kb on + strand, within B158DRAFT_2525at 714.449 kb on + strand, within B158DRAFT_2525at 714.449 kb on + strand, within B158DRAFT_2525at 714.449 kb on + strand, within B158DRAFT_2525at 714.457 kb on - strand, within B158DRAFT_2525at 714.457 kb on - strand, within B158DRAFT_2525at 714.463 kb on + strand, within B158DRAFT_2525at 714.463 kb on + strand, within B158DRAFT_2525at 714.523 kb on + strand, within B158DRAFT_2525at 714.554 kb on - strand, within B158DRAFT_2525at 714.564 kb on - strand, within B158DRAFT_2525at 714.577 kb on - strand, within B158DRAFT_2525at 714.578 kb on - strand, within B158DRAFT_2525at 714.583 kb on - strand, within B158DRAFT_2525at 714.583 kb on - strand, within B158DRAFT_2525at 714.605 kb on + strand, within B158DRAFT_2525at 714.613 kb on - strand, within B158DRAFT_2525at 714.676 kb on + strand, within B158DRAFT_2525at 714.677 kb on - strand, within B158DRAFT_2525at 714.684 kb on - strand, within B158DRAFT_2525at 714.684 kb on - strand, within B158DRAFT_2525at 714.684 kb on - strand, within B158DRAFT_2525at 714.684 kb on - strand, within B158DRAFT_2525at 714.706 kb on + strand, within B158DRAFT_2525at 714.711 kb on + strand, within B158DRAFT_2525

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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712,299 + B158DRAFT_2523 0.36 -0.0
712,299 + B158DRAFT_2523 0.36 +0.3
712,306 - B158DRAFT_2523 0.37 +0.2
712,307 - B158DRAFT_2523 0.37 +0.0
712,307 - B158DRAFT_2523 0.37 +0.6
712,325 - B158DRAFT_2523 0.38 +0.0
712,342 - B158DRAFT_2523 0.39 +0.3
712,370 + B158DRAFT_2523 0.41 -0.4
712,402 + B158DRAFT_2523 0.43 -0.4
712,476 + B158DRAFT_2523 0.49 +0.3
712,481 + B158DRAFT_2523 0.49 -0.0
712,481 + B158DRAFT_2523 0.49 +0.0
712,576 - B158DRAFT_2523 0.56 +0.0
712,589 - B158DRAFT_2523 0.57 +1.2
712,613 + B158DRAFT_2523 0.59 -0.1
712,620 - B158DRAFT_2523 0.59 -0.0
712,666 + B158DRAFT_2523 0.62 -0.1
712,674 - B158DRAFT_2523 0.63 -0.6
712,747 - B158DRAFT_2523 0.68 -0.1
712,781 + B158DRAFT_2523 0.71 -1.0
712,802 + B158DRAFT_2523 0.72 -0.2
712,860 + B158DRAFT_2523 0.76 +0.4
712,877 + B158DRAFT_2523 0.77 +0.5
712,931 + B158DRAFT_2523 0.81 +0.0
712,946 + B158DRAFT_2523 0.82 +0.3
712,954 + B158DRAFT_2523 0.83 +1.3
712,956 + B158DRAFT_2523 0.83 -1.0
712,956 + B158DRAFT_2523 0.83 +0.0
712,956 + B158DRAFT_2523 0.83 +0.6
712,956 + B158DRAFT_2523 0.83 +0.1
712,956 + B158DRAFT_2523 0.83 +0.4
712,964 - B158DRAFT_2523 0.84 +0.7
712,964 - B158DRAFT_2523 0.84 +0.7
712,964 - B158DRAFT_2523 0.84 -0.2
712,964 - B158DRAFT_2523 0.84 +0.4
712,964 - B158DRAFT_2523 0.84 -0.1
712,964 - B158DRAFT_2523 0.84 +0.2
712,973 - B158DRAFT_2523 0.84 +0.3
712,997 + B158DRAFT_2523 0.86 +0.2
712,997 + B158DRAFT_2523 0.86 -0.0
713,005 - B158DRAFT_2523 0.87 -0.5
713,019 + B158DRAFT_2523 0.88 +0.3
713,019 + B158DRAFT_2523 0.88 +0.0
713,027 - B158DRAFT_2523 0.88 +0.5
713,027 - B158DRAFT_2523 0.88 +3.4
713,053 + -0.9
713,071 - +0.1
713,142 + -0.8
713,150 - +0.3
713,163 - +0.8
713,296 + +0.0
713,296 + -0.3
713,304 - -0.3
713,349 - B158DRAFT_2524 0.16 -0.9
713,422 - B158DRAFT_2524 0.29 -0.5
713,444 - B158DRAFT_2524 0.33 -0.4
713,449 - B158DRAFT_2524 0.34 -0.2
713,454 - B158DRAFT_2524 0.35 -0.1
713,463 - B158DRAFT_2524 0.36 -1.0
713,595 - B158DRAFT_2524 0.59 -1.4
713,606 + B158DRAFT_2524 0.61 -1.4
713,614 - B158DRAFT_2524 0.63 +0.3
713,614 - B158DRAFT_2524 0.63 -0.4
713,700 + B158DRAFT_2524 0.78 -1.1
713,727 + B158DRAFT_2524 0.82 -0.8
713,735 - B158DRAFT_2524 0.84 -0.4
713,735 - B158DRAFT_2524 0.84 -0.2
713,772 + +0.3
713,839 - +0.1
713,848 + -0.5
713,860 + +0.4
713,860 + -0.3
713,860 + -0.1
713,868 - -0.3
713,869 - +0.0
713,907 + -0.3
713,957 + +0.2
713,964 + -0.4
713,972 - -0.4
713,972 - +0.1
713,972 - -0.0
714,070 - B158DRAFT_2525 0.17 -0.7
714,070 - B158DRAFT_2525 0.17 -0.7
714,079 + B158DRAFT_2525 0.17 -0.7
714,087 - B158DRAFT_2525 0.18 +0.1
714,103 - B158DRAFT_2525 0.19 -0.5
714,109 + B158DRAFT_2525 0.19 -0.5
714,117 - B158DRAFT_2525 0.20 -0.4
714,128 + B158DRAFT_2525 0.21 -0.7
714,134 + B158DRAFT_2525 0.21 -0.0
714,136 - B158DRAFT_2525 0.21 -0.1
714,205 + B158DRAFT_2525 0.26 +0.0
714,229 - B158DRAFT_2525 0.28 +1.0
714,271 + B158DRAFT_2525 0.31 +0.7
714,271 + B158DRAFT_2525 0.31 -0.6
714,271 + B158DRAFT_2525 0.31 -0.9
714,285 - B158DRAFT_2525 0.32 -0.1
714,339 - B158DRAFT_2525 0.36 -0.1
714,339 - B158DRAFT_2525 0.36 -0.1
714,398 + B158DRAFT_2525 0.40 -1.5
714,430 - B158DRAFT_2525 0.42 -0.4
714,430 - B158DRAFT_2525 0.42 +0.0
714,449 + B158DRAFT_2525 0.44 -0.4
714,449 + B158DRAFT_2525 0.44 +0.1
714,449 + B158DRAFT_2525 0.44 -0.4
714,449 + B158DRAFT_2525 0.44 +0.7
714,449 + B158DRAFT_2525 0.44 -0.0
714,449 + B158DRAFT_2525 0.44 +0.0
714,457 - B158DRAFT_2525 0.44 -0.3
714,457 - B158DRAFT_2525 0.44 -0.6
714,463 + B158DRAFT_2525 0.45 +0.0
714,463 + B158DRAFT_2525 0.45 -0.3
714,523 + B158DRAFT_2525 0.49 -0.2
714,554 - B158DRAFT_2525 0.51 -0.1
714,564 - B158DRAFT_2525 0.52 -0.1
714,577 - B158DRAFT_2525 0.53 +0.3
714,578 - B158DRAFT_2525 0.53 +0.2
714,583 - B158DRAFT_2525 0.53 +0.1
714,583 - B158DRAFT_2525 0.53 +0.1
714,605 + B158DRAFT_2525 0.55 -0.5
714,613 - B158DRAFT_2525 0.56 -0.4
714,676 + B158DRAFT_2525 0.60 -1.2
714,677 - B158DRAFT_2525 0.60 -0.5
714,684 - B158DRAFT_2525 0.61 -0.1
714,684 - B158DRAFT_2525 0.61 -0.1
714,684 - B158DRAFT_2525 0.61 -0.0
714,684 - B158DRAFT_2525 0.61 +0.1
714,706 + B158DRAFT_2525 0.62 -1.3
714,711 + B158DRAFT_2525 0.63 -0.6

Or see this region's nucleotide sequence