Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2428 and B158DRAFT_2429 overlap by 4 nucleotides B158DRAFT_2429 and B158DRAFT_2430 are separated by 25 nucleotides B158DRAFT_2430 and B158DRAFT_2431 overlap by 56 nucleotides
B158DRAFT_2428: B158DRAFT_2428 - indole-3-glycerol phosphate synthase (EC 4.1.1.48), at 600,950 to 602,410
_2428
B158DRAFT_2429: B158DRAFT_2429 - tryptophan synthase, beta subunit, at 602,407 to 603,618
_2429
B158DRAFT_2430: B158DRAFT_2430 - tryptophan synthase, alpha chain (EC 4.2.1.20), at 603,644 to 604,549
_2430
B158DRAFT_2431: B158DRAFT_2431 - hypothetical protein, at 604,494 to 604,742
_2431
Position (kb) 602
603
604 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 601.417 kb on + strand, within B158DRAFT_2428 at 601.425 kb on - strand, within B158DRAFT_2428 at 601.490 kb on + strand, within B158DRAFT_2428 at 601.509 kb on + strand, within B158DRAFT_2428 at 601.943 kb on - strand, within B158DRAFT_2428 at 601.943 kb on - strand, within B158DRAFT_2428 at 601.966 kb on + strand, within B158DRAFT_2428 at 602.133 kb on + strand, within B158DRAFT_2428 at 602.360 kb on + strand at 602.368 kb on - strand at 602.374 kb on + strand at 602.374 kb on + strand at 602.770 kb on + strand, within B158DRAFT_2429 at 602.770 kb on + strand, within B158DRAFT_2429 at 602.791 kb on + strand, within B158DRAFT_2429 at 602.791 kb on + strand, within B158DRAFT_2429 at 602.799 kb on - strand, within B158DRAFT_2429 at 602.799 kb on - strand, within B158DRAFT_2429 at 602.861 kb on + strand, within B158DRAFT_2429 at 602.994 kb on + strand, within B158DRAFT_2429 at 603.180 kb on + strand, within B158DRAFT_2429 at 603.188 kb on - strand, within B158DRAFT_2429 at 603.283 kb on - strand, within B158DRAFT_2429 at 603.297 kb on + strand, within B158DRAFT_2429 at 603.348 kb on - strand, within B158DRAFT_2429 at 603.348 kb on - strand, within B158DRAFT_2429 at 603.372 kb on + strand, within B158DRAFT_2429 at 603.590 kb on - strand at 604.091 kb on + strand, within B158DRAFT_2430 at 604.161 kb on - strand, within B158DRAFT_2430 at 604.161 kb on - strand, within B158DRAFT_2430 at 604.161 kb on - strand, within B158DRAFT_2430 at 604.161 kb on - strand, within B158DRAFT_2430 at 604.327 kb on - strand, within B158DRAFT_2430
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 601,417 + B158DRAFT_2428 0.32 -0.5 601,425 - B158DRAFT_2428 0.33 -0.9 601,490 + B158DRAFT_2428 0.37 -0.9 601,509 + B158DRAFT_2428 0.38 -1.0 601,943 - B158DRAFT_2428 0.68 -1.3 601,943 - B158DRAFT_2428 0.68 -1.9 601,966 + B158DRAFT_2428 0.70 -0.9 602,133 + B158DRAFT_2428 0.81 -0.7 602,360 + -1.5 602,368 - -0.9 602,374 + -0.4 602,374 + -0.8 602,770 + B158DRAFT_2429 0.30 -1.1 602,770 + B158DRAFT_2429 0.30 -1.7 602,791 + B158DRAFT_2429 0.32 -1.6 602,791 + B158DRAFT_2429 0.32 -1.3 602,799 - B158DRAFT_2429 0.32 -3.7 602,799 - B158DRAFT_2429 0.32 -1.7 602,861 + B158DRAFT_2429 0.37 -2.8 602,994 + B158DRAFT_2429 0.48 -1.5 603,180 + B158DRAFT_2429 0.64 -2.1 603,188 - B158DRAFT_2429 0.64 -1.7 603,283 - B158DRAFT_2429 0.72 -1.9 603,297 + B158DRAFT_2429 0.73 -1.3 603,348 - B158DRAFT_2429 0.78 -1.4 603,348 - B158DRAFT_2429 0.78 -1.5 603,372 + B158DRAFT_2429 0.80 -1.1 603,590 - -1.4 604,091 + B158DRAFT_2430 0.49 -1.6 604,161 - B158DRAFT_2430 0.57 -1.1 604,161 - B158DRAFT_2430 0.57 -1.6 604,161 - B158DRAFT_2430 0.57 -1.4 604,161 - B158DRAFT_2430 0.57 -0.8 604,327 - B158DRAFT_2430 0.75 +0.2
Or see this region's nucleotide sequence