Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2425

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2424 and B158DRAFT_2425 overlap by 11 nucleotidesB158DRAFT_2425 and B158DRAFT_2426 overlap by 4 nucleotidesB158DRAFT_2426 and B158DRAFT_2427 overlap by 14 nucleotides B158DRAFT_2424: B158DRAFT_2424 - 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54), at 596,742 to 597,776 _2424 B158DRAFT_2425: B158DRAFT_2425 - anthranilate synthase, component I (EC 4.1.3.27), at 597,766 to 599,355 _2425 B158DRAFT_2426: B158DRAFT_2426 - glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase, at 599,352 to 599,966 _2426 B158DRAFT_2427: B158DRAFT_2427 - anthranilate phosphoribosyltransferase, at 599,953 to 600,957 _2427 Position (kb) 597 598 599 600Strain fitness (log2 ratio) -2 -1 0 1at 596.775 kb on - strandat 596.823 kb on + strandat 596.838 kb on + strandat 596.924 kb on + strand, within B158DRAFT_2424at 596.971 kb on + strand, within B158DRAFT_2424at 596.978 kb on + strand, within B158DRAFT_2424at 596.996 kb on + strand, within B158DRAFT_2424at 597.013 kb on + strand, within B158DRAFT_2424at 597.013 kb on + strand, within B158DRAFT_2424at 597.013 kb on + strand, within B158DRAFT_2424at 597.013 kb on + strand, within B158DRAFT_2424at 597.013 kb on + strand, within B158DRAFT_2424at 597.013 kb on + strand, within B158DRAFT_2424at 597.013 kb on + strand, within B158DRAFT_2424at 597.013 kb on + strand, within B158DRAFT_2424at 597.021 kb on - strand, within B158DRAFT_2424at 597.079 kb on - strand, within B158DRAFT_2424at 597.108 kb on + strand, within B158DRAFT_2424at 597.114 kb on - strand, within B158DRAFT_2424at 597.146 kb on + strand, within B158DRAFT_2424at 597.146 kb on + strand, within B158DRAFT_2424at 597.202 kb on + strand, within B158DRAFT_2424at 597.308 kb on + strand, within B158DRAFT_2424at 597.316 kb on - strand, within B158DRAFT_2424at 597.320 kb on + strand, within B158DRAFT_2424at 597.328 kb on - strand, within B158DRAFT_2424at 597.436 kb on - strand, within B158DRAFT_2424at 597.559 kb on + strand, within B158DRAFT_2424at 597.559 kb on + strand, within B158DRAFT_2424at 597.567 kb on - strand, within B158DRAFT_2424at 597.567 kb on - strand, within B158DRAFT_2424at 597.586 kb on - strand, within B158DRAFT_2424at 597.613 kb on + strand, within B158DRAFT_2424at 597.672 kb on + strand, within B158DRAFT_2424at 597.680 kb on - strandat 597.731 kb on - strandat 597.771 kb on + strandat 597.889 kb on + strandat 597.897 kb on - strandat 597.915 kb on - strandat 598.220 kb on + strand, within B158DRAFT_2425at 598.228 kb on - strand, within B158DRAFT_2425at 598.278 kb on + strand, within B158DRAFT_2425at 598.351 kb on + strand, within B158DRAFT_2425at 598.481 kb on - strand, within B158DRAFT_2425at 598.549 kb on - strand, within B158DRAFT_2425at 598.549 kb on - strand, within B158DRAFT_2425at 598.647 kb on + strand, within B158DRAFT_2425at 598.655 kb on - strand, within B158DRAFT_2425at 598.832 kb on + strand, within B158DRAFT_2425at 599.293 kb on + strandat 599.343 kb on + strandat 599.343 kb on - strandat 599.569 kb on - strand, within B158DRAFT_2426at 599.723 kb on + strand, within B158DRAFT_2426at 600.089 kb on + strand, within B158DRAFT_2427at 600.207 kb on - strand, within B158DRAFT_2427at 600.347 kb on + strand, within B158DRAFT_2427

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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596,775 - -0.2
596,823 + -0.1
596,838 + -2.4
596,924 + B158DRAFT_2424 0.18 +0.3
596,971 + B158DRAFT_2424 0.22 -0.5
596,978 + B158DRAFT_2424 0.23 -0.9
596,996 + B158DRAFT_2424 0.25 +0.4
597,013 + B158DRAFT_2424 0.26 -0.1
597,013 + B158DRAFT_2424 0.26 +0.1
597,013 + B158DRAFT_2424 0.26 +0.1
597,013 + B158DRAFT_2424 0.26 -0.2
597,013 + B158DRAFT_2424 0.26 -0.4
597,013 + B158DRAFT_2424 0.26 -0.3
597,013 + B158DRAFT_2424 0.26 -0.3
597,013 + B158DRAFT_2424 0.26 -0.3
597,021 - B158DRAFT_2424 0.27 -0.1
597,079 - B158DRAFT_2424 0.33 -0.1
597,108 + B158DRAFT_2424 0.35 -0.2
597,114 - B158DRAFT_2424 0.36 -0.1
597,146 + B158DRAFT_2424 0.39 -1.0
597,146 + B158DRAFT_2424 0.39 +0.7
597,202 + B158DRAFT_2424 0.44 -0.1
597,308 + B158DRAFT_2424 0.55 -0.1
597,316 - B158DRAFT_2424 0.55 -0.7
597,320 + B158DRAFT_2424 0.56 +0.6
597,328 - B158DRAFT_2424 0.57 +0.2
597,436 - B158DRAFT_2424 0.67 -0.7
597,559 + B158DRAFT_2424 0.79 -0.5
597,559 + B158DRAFT_2424 0.79 -0.1
597,567 - B158DRAFT_2424 0.80 -0.4
597,567 - B158DRAFT_2424 0.80 -1.0
597,586 - B158DRAFT_2424 0.82 +0.1
597,613 + B158DRAFT_2424 0.84 +0.1
597,672 + B158DRAFT_2424 0.90 -0.8
597,680 - -0.0
597,731 - -1.0
597,771 + -1.1
597,889 + -0.5
597,897 - -0.6
597,915 - -0.9
598,220 + B158DRAFT_2425 0.29 -0.5
598,228 - B158DRAFT_2425 0.29 -1.3
598,278 + B158DRAFT_2425 0.32 -0.9
598,351 + B158DRAFT_2425 0.37 -0.2
598,481 - B158DRAFT_2425 0.45 -0.9
598,549 - B158DRAFT_2425 0.49 +0.1
598,549 - B158DRAFT_2425 0.49 -1.1
598,647 + B158DRAFT_2425 0.55 -1.2
598,655 - B158DRAFT_2425 0.56 -1.4
598,832 + B158DRAFT_2425 0.67 -1.0
599,293 + -1.5
599,343 + -0.3
599,343 - -2.1
599,569 - B158DRAFT_2426 0.35 -1.3
599,723 + B158DRAFT_2426 0.60 -0.6
600,089 + B158DRAFT_2427 0.14 -0.3
600,207 - B158DRAFT_2427 0.25 -0.8
600,347 + B158DRAFT_2427 0.39 -1.0

Or see this region's nucleotide sequence