Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2407

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2405 and B158DRAFT_2406 are separated by 50 nucleotidesB158DRAFT_2406 and B158DRAFT_2407 are separated by 188 nucleotidesB158DRAFT_2407 and B158DRAFT_2408 are separated by 61 nucleotides B158DRAFT_2405: B158DRAFT_2405 - hypothetical protein, at 576,459 to 577,190 _2405 B158DRAFT_2406: B158DRAFT_2406 - hypothetical protein, at 577,241 to 577,819 _2406 B158DRAFT_2407: B158DRAFT_2407 - riboflavin kinase/FMN adenylyltransferase, at 578,008 to 578,943 _2407 B158DRAFT_2408: B158DRAFT_2408 - Isoleucyl-tRNA synthetase (EC 6.1.1.5), at 579,005 to 581,809 _2408 Position (kb) 578 579Strain fitness (log2 ratio) -1 0 1at 577.017 kb on + strand, within B158DRAFT_2405at 577.017 kb on + strand, within B158DRAFT_2405at 577.025 kb on - strand, within B158DRAFT_2405at 577.025 kb on - strand, within B158DRAFT_2405at 577.065 kb on + strand, within B158DRAFT_2405at 577.065 kb on + strand, within B158DRAFT_2405at 577.073 kb on - strand, within B158DRAFT_2405at 577.073 kb on - strand, within B158DRAFT_2405at 577.110 kb on - strand, within B158DRAFT_2405at 577.112 kb on + strand, within B158DRAFT_2405at 577.120 kb on + strandat 577.120 kb on + strandat 577.128 kb on - strandat 577.158 kb on + strandat 577.168 kb on + strandat 577.187 kb on - strandat 577.256 kb on - strandat 577.256 kb on - strandat 577.259 kb on + strandat 577.269 kb on + strandat 577.269 kb on + strandat 577.269 kb on + strandat 577.269 kb on + strandat 577.277 kb on - strandat 577.277 kb on - strandat 577.326 kb on + strand, within B158DRAFT_2406at 577.382 kb on + strand, within B158DRAFT_2406at 577.421 kb on + strand, within B158DRAFT_2406at 577.428 kb on + strand, within B158DRAFT_2406at 577.436 kb on - strand, within B158DRAFT_2406at 577.438 kb on + strand, within B158DRAFT_2406at 577.438 kb on + strand, within B158DRAFT_2406at 577.446 kb on - strand, within B158DRAFT_2406at 577.542 kb on + strand, within B158DRAFT_2406at 577.542 kb on + strand, within B158DRAFT_2406at 577.542 kb on + strand, within B158DRAFT_2406at 577.542 kb on + strand, within B158DRAFT_2406at 577.542 kb on + strand, within B158DRAFT_2406at 577.542 kb on + strand, within B158DRAFT_2406at 577.550 kb on - strand, within B158DRAFT_2406at 577.550 kb on - strand, within B158DRAFT_2406at 577.550 kb on - strand, within B158DRAFT_2406at 577.550 kb on - strand, within B158DRAFT_2406at 577.550 kb on - strand, within B158DRAFT_2406at 577.550 kb on - strand, within B158DRAFT_2406at 577.563 kb on + strand, within B158DRAFT_2406at 577.591 kb on + strand, within B158DRAFT_2406at 577.599 kb on - strand, within B158DRAFT_2406at 577.712 kb on + strand, within B158DRAFT_2406at 577.777 kb on + strandat 577.785 kb on - strandat 577.855 kb on + strandat 577.855 kb on + strandat 577.855 kb on + strandat 577.863 kb on - strandat 578.502 kb on + strand, within B158DRAFT_2407at 578.956 kb on + strandat 578.956 kb on + strandat 578.956 kb on + strandat 578.956 kb on + strandat 578.991 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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577,017 + B158DRAFT_2405 0.76 +0.2
577,017 + B158DRAFT_2405 0.76 -0.0
577,025 - B158DRAFT_2405 0.77 -0.4
577,025 - B158DRAFT_2405 0.77 +0.2
577,065 + B158DRAFT_2405 0.83 +0.2
577,065 + B158DRAFT_2405 0.83 +0.6
577,073 - B158DRAFT_2405 0.84 -0.5
577,073 - B158DRAFT_2405 0.84 +0.7
577,110 - B158DRAFT_2405 0.89 -1.5
577,112 + B158DRAFT_2405 0.89 +0.5
577,120 + +0.2
577,120 + +0.3
577,128 - +0.2
577,158 + -0.4
577,168 + +0.5
577,187 - +0.7
577,256 - -0.8
577,256 - -0.1
577,259 + +0.6
577,269 + -0.1
577,269 + -0.9
577,269 + +1.5
577,269 + +0.5
577,277 - -1.3
577,277 - -0.8
577,326 + B158DRAFT_2406 0.15 +0.6
577,382 + B158DRAFT_2406 0.24 -0.3
577,421 + B158DRAFT_2406 0.31 +0.5
577,428 + B158DRAFT_2406 0.32 +0.3
577,436 - B158DRAFT_2406 0.34 +0.0
577,438 + B158DRAFT_2406 0.34 -1.5
577,438 + B158DRAFT_2406 0.34 -0.0
577,446 - B158DRAFT_2406 0.35 -0.4
577,542 + B158DRAFT_2406 0.52 +1.2
577,542 + B158DRAFT_2406 0.52 -0.5
577,542 + B158DRAFT_2406 0.52 +0.7
577,542 + B158DRAFT_2406 0.52 -0.9
577,542 + B158DRAFT_2406 0.52 +0.3
577,542 + B158DRAFT_2406 0.52 +0.5
577,550 - B158DRAFT_2406 0.53 +0.4
577,550 - B158DRAFT_2406 0.53 +0.4
577,550 - B158DRAFT_2406 0.53 +0.2
577,550 - B158DRAFT_2406 0.53 -0.4
577,550 - B158DRAFT_2406 0.53 -0.3
577,550 - B158DRAFT_2406 0.53 +0.3
577,563 + B158DRAFT_2406 0.56 +0.9
577,591 + B158DRAFT_2406 0.60 -0.1
577,599 - B158DRAFT_2406 0.62 -0.8
577,712 + B158DRAFT_2406 0.81 +0.3
577,777 + -0.5
577,785 - -0.0
577,855 + -1.4
577,855 + -0.5
577,855 + -0.7
577,863 - +0.3
578,502 + B158DRAFT_2407 0.53 +0.7
578,956 + +0.3
578,956 + -0.4
578,956 + -1.7
578,956 + +0.1
578,991 + +0.5

Or see this region's nucleotide sequence