Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2317 and B158DRAFT_2318 overlap by 11 nucleotides B158DRAFT_2318 and B158DRAFT_2319 are separated by 18 nucleotides B158DRAFT_2319 and B158DRAFT_2320 overlap by 4 nucleotides
B158DRAFT_2317: B158DRAFT_2317 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 479,564 to 482,602
_2317
B158DRAFT_2318: B158DRAFT_2318 - 2-phosphoglycolate phosphatase, prokaryotic, at 482,592 to 483,257
_2318
B158DRAFT_2319: B158DRAFT_2319 - 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64), at 483,276 to 483,995
_2319
B158DRAFT_2320: B158DRAFT_2320 - Cytosine deaminase and related metal-dependent hydrolases, at 483,992 to 485,332
_2320
Position (kb) 482
483
484 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 481.731 kb on - strand, within B158DRAFT_2317 at 481.733 kb on + strand, within B158DRAFT_2317 at 481.743 kb on - strand, within B158DRAFT_2317 at 481.786 kb on + strand, within B158DRAFT_2317 at 481.831 kb on - strand, within B158DRAFT_2317 at 481.868 kb on - strand, within B158DRAFT_2317 at 481.899 kb on + strand, within B158DRAFT_2317 at 482.122 kb on + strand, within B158DRAFT_2317 at 482.162 kb on - strand, within B158DRAFT_2317 at 482.246 kb on - strand, within B158DRAFT_2317 at 482.310 kb on - strand at 482.331 kb on + strand at 482.339 kb on - strand at 482.339 kb on - strand at 482.351 kb on - strand at 482.398 kb on + strand at 482.475 kb on + strand at 482.557 kb on - strand at 482.764 kb on - strand, within B158DRAFT_2318 at 482.774 kb on + strand, within B158DRAFT_2318 at 482.845 kb on + strand, within B158DRAFT_2318 at 482.853 kb on - strand, within B158DRAFT_2318 at 482.894 kb on + strand, within B158DRAFT_2318 at 482.934 kb on - strand, within B158DRAFT_2318 at 482.959 kb on + strand, within B158DRAFT_2318 at 482.993 kb on - strand, within B158DRAFT_2318 at 482.998 kb on - strand, within B158DRAFT_2318 at 483.080 kb on + strand, within B158DRAFT_2318 at 483.153 kb on + strand, within B158DRAFT_2318 at 483.182 kb on - strand, within B158DRAFT_2318 at 483.187 kb on + strand, within B158DRAFT_2318 at 483.274 kb on + strand at 483.288 kb on + strand at 484.015 kb on - strand at 484.078 kb on - strand at 484.106 kb on - strand at 484.121 kb on - strand at 484.121 kb on - strand at 484.121 kb on - strand at 484.121 kb on - strand at 484.121 kb on - strand at 484.160 kb on + strand, within B158DRAFT_2320 at 484.185 kb on + strand, within B158DRAFT_2320 at 484.185 kb on + strand, within B158DRAFT_2320 at 484.193 kb on - strand, within B158DRAFT_2320 at 484.193 kb on - strand, within B158DRAFT_2320 at 484.201 kb on - strand, within B158DRAFT_2320 at 484.215 kb on + strand, within B158DRAFT_2320 at 484.252 kb on + strand, within B158DRAFT_2320 at 484.252 kb on + strand, within B158DRAFT_2320
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 481,731 - B158DRAFT_2317 0.71 -0.4 481,733 + B158DRAFT_2317 0.71 +0.2 481,743 - B158DRAFT_2317 0.72 -0.1 481,786 + B158DRAFT_2317 0.73 +0.4 481,831 - B158DRAFT_2317 0.75 -0.6 481,868 - B158DRAFT_2317 0.76 -0.0 481,899 + B158DRAFT_2317 0.77 -0.3 482,122 + B158DRAFT_2317 0.84 +0.0 482,162 - B158DRAFT_2317 0.85 -0.4 482,246 - B158DRAFT_2317 0.88 -0.4 482,310 - -0.8 482,331 + +0.3 482,339 - -0.2 482,339 - +0.0 482,351 - +0.4 482,398 + +0.1 482,475 + -0.4 482,557 - +0.0 482,764 - B158DRAFT_2318 0.26 -2.2 482,774 + B158DRAFT_2318 0.27 -2.8 482,845 + B158DRAFT_2318 0.38 -2.0 482,853 - B158DRAFT_2318 0.39 -1.6 482,894 + B158DRAFT_2318 0.45 -3.4 482,934 - B158DRAFT_2318 0.51 -2.6 482,959 + B158DRAFT_2318 0.55 -2.3 482,993 - B158DRAFT_2318 0.60 -3.9 482,998 - B158DRAFT_2318 0.61 -2.4 483,080 + B158DRAFT_2318 0.73 -3.0 483,153 + B158DRAFT_2318 0.84 -4.6 483,182 - B158DRAFT_2318 0.89 -4.6 483,187 + B158DRAFT_2318 0.89 -3.1 483,274 + -2.3 483,288 + -2.6 484,015 - -0.4 484,078 - -1.1 484,106 - -0.2 484,121 - +0.0 484,121 - -0.1 484,121 - -0.7 484,121 - -0.3 484,121 - -0.6 484,160 + B158DRAFT_2320 0.13 -0.8 484,185 + B158DRAFT_2320 0.14 +0.4 484,185 + B158DRAFT_2320 0.14 -0.4 484,193 - B158DRAFT_2320 0.15 -0.5 484,193 - B158DRAFT_2320 0.15 -1.0 484,201 - B158DRAFT_2320 0.16 -0.2 484,215 + B158DRAFT_2320 0.17 -0.9 484,252 + B158DRAFT_2320 0.19 -0.4 484,252 + B158DRAFT_2320 0.19 -0.3
Or see this region's nucleotide sequence