Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2164

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2163 and B158DRAFT_2164 are separated by 75 nucleotidesB158DRAFT_2164 and B158DRAFT_2165 are separated by 194 nucleotidesB158DRAFT_2165 and B158DRAFT_2166 are separated by 9 nucleotides B158DRAFT_2163: B158DRAFT_2163 - uroporphyrin-III C-methyltransferase, at 303,535 to 304,977 _2163 B158DRAFT_2164: B158DRAFT_2164 - amino acid/peptide transporter (Peptide:H+ symporter), bacterial, at 305,053 to 307,260 _2164 B158DRAFT_2165: B158DRAFT_2165 - Alkylated DNA repair protein, at 307,455 to 308,081 _2165 B158DRAFT_2166: B158DRAFT_2166 - putative quinone oxidoreductase, YhdH/YhfP family, at 308,091 to 309,086 _2166 Position (kb) 305 306 307 308Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 304.094 kb on + strand, within B158DRAFT_2163at 304.129 kb on - strand, within B158DRAFT_2163at 304.129 kb on - strand, within B158DRAFT_2163at 304.223 kb on - strand, within B158DRAFT_2163at 304.261 kb on + strand, within B158DRAFT_2163at 304.261 kb on + strand, within B158DRAFT_2163at 304.405 kb on + strand, within B158DRAFT_2163at 304.422 kb on + strand, within B158DRAFT_2163at 304.466 kb on + strand, within B158DRAFT_2163at 304.533 kb on - strand, within B158DRAFT_2163at 304.555 kb on + strand, within B158DRAFT_2163at 304.563 kb on - strand, within B158DRAFT_2163at 304.564 kb on + strand, within B158DRAFT_2163at 304.760 kb on + strand, within B158DRAFT_2163at 304.818 kb on + strand, within B158DRAFT_2163at 304.836 kb on + strandat 305.001 kb on - strandat 305.111 kb on + strandat 305.140 kb on + strandat 305.140 kb on + strandat 305.203 kb on - strandat 305.210 kb on + strandat 305.210 kb on + strandat 305.218 kb on - strandat 305.436 kb on + strand, within B158DRAFT_2164at 305.454 kb on - strand, within B158DRAFT_2164at 305.522 kb on + strand, within B158DRAFT_2164at 305.522 kb on + strand, within B158DRAFT_2164at 305.522 kb on + strand, within B158DRAFT_2164at 305.530 kb on - strand, within B158DRAFT_2164at 305.530 kb on - strand, within B158DRAFT_2164at 305.557 kb on + strand, within B158DRAFT_2164at 305.575 kb on - strand, within B158DRAFT_2164at 305.595 kb on + strand, within B158DRAFT_2164at 305.595 kb on + strand, within B158DRAFT_2164at 305.603 kb on - strand, within B158DRAFT_2164at 305.608 kb on - strand, within B158DRAFT_2164at 305.608 kb on - strand, within B158DRAFT_2164at 305.622 kb on + strand, within B158DRAFT_2164at 305.622 kb on + strand, within B158DRAFT_2164at 305.622 kb on + strand, within B158DRAFT_2164at 305.622 kb on + strand, within B158DRAFT_2164at 305.630 kb on - strand, within B158DRAFT_2164at 305.654 kb on + strand, within B158DRAFT_2164at 305.662 kb on - strand, within B158DRAFT_2164at 305.662 kb on - strand, within B158DRAFT_2164at 305.738 kb on + strand, within B158DRAFT_2164at 305.738 kb on + strand, within B158DRAFT_2164at 305.746 kb on - strand, within B158DRAFT_2164at 305.746 kb on - strand, within B158DRAFT_2164at 305.878 kb on + strand, within B158DRAFT_2164at 305.936 kb on + strand, within B158DRAFT_2164at 305.942 kb on + strand, within B158DRAFT_2164at 305.942 kb on + strand, within B158DRAFT_2164at 305.942 kb on + strand, within B158DRAFT_2164at 305.942 kb on + strand, within B158DRAFT_2164at 305.948 kb on + strand, within B158DRAFT_2164at 305.957 kb on - strand, within B158DRAFT_2164at 306.021 kb on + strand, within B158DRAFT_2164at 306.029 kb on - strand, within B158DRAFT_2164at 306.039 kb on - strand, within B158DRAFT_2164at 306.058 kb on + strand, within B158DRAFT_2164at 306.092 kb on - strand, within B158DRAFT_2164at 306.095 kb on + strand, within B158DRAFT_2164at 306.095 kb on + strand, within B158DRAFT_2164at 306.095 kb on + strand, within B158DRAFT_2164at 306.095 kb on + strand, within B158DRAFT_2164at 306.095 kb on + strand, within B158DRAFT_2164at 306.100 kb on + strand, within B158DRAFT_2164at 306.100 kb on + strand, within B158DRAFT_2164at 306.103 kb on - strand, within B158DRAFT_2164at 306.182 kb on + strand, within B158DRAFT_2164at 306.184 kb on + strand, within B158DRAFT_2164at 306.273 kb on - strand, within B158DRAFT_2164at 306.292 kb on + strand, within B158DRAFT_2164at 306.292 kb on + strand, within B158DRAFT_2164at 306.300 kb on - strand, within B158DRAFT_2164at 306.383 kb on - strand, within B158DRAFT_2164at 306.409 kb on - strand, within B158DRAFT_2164at 306.495 kb on - strand, within B158DRAFT_2164at 306.522 kb on - strand, within B158DRAFT_2164at 306.556 kb on - strand, within B158DRAFT_2164at 306.556 kb on - strand, within B158DRAFT_2164at 306.564 kb on - strand, within B158DRAFT_2164at 306.607 kb on - strand, within B158DRAFT_2164at 306.644 kb on + strand, within B158DRAFT_2164at 306.651 kb on - strand, within B158DRAFT_2164at 306.652 kb on - strand, within B158DRAFT_2164at 306.660 kb on - strand, within B158DRAFT_2164at 306.670 kb on + strand, within B158DRAFT_2164at 306.670 kb on + strand, within B158DRAFT_2164at 306.692 kb on - strand, within B158DRAFT_2164at 306.770 kb on + strand, within B158DRAFT_2164at 306.770 kb on - strand, within B158DRAFT_2164at 306.770 kb on - strand, within B158DRAFT_2164at 306.804 kb on - strand, within B158DRAFT_2164at 306.829 kb on + strand, within B158DRAFT_2164at 306.837 kb on - strand, within B158DRAFT_2164at 306.837 kb on - strand, within B158DRAFT_2164at 306.837 kb on - strand, within B158DRAFT_2164at 306.837 kb on - strand, within B158DRAFT_2164at 306.837 kb on - strand, within B158DRAFT_2164at 306.845 kb on + strand, within B158DRAFT_2164at 306.862 kb on + strand, within B158DRAFT_2164at 306.932 kb on - strand, within B158DRAFT_2164at 306.932 kb on - strand, within B158DRAFT_2164at 306.946 kb on + strand, within B158DRAFT_2164at 306.954 kb on - strand, within B158DRAFT_2164at 307.016 kb on + strand, within B158DRAFT_2164at 307.049 kb on + strandat 307.049 kb on + strandat 307.054 kb on + strandat 307.057 kb on - strandat 307.057 kb on - strandat 307.062 kb on - strandat 307.062 kb on - strandat 307.064 kb on + strandat 307.064 kb on + strandat 307.064 kb on + strandat 307.072 kb on - strandat 307.072 kb on - strandat 307.072 kb on - strandat 307.192 kb on + strandat 307.249 kb on - strandat 307.300 kb on - strandat 307.321 kb on + strandat 307.363 kb on + strandat 307.458 kb on + strandat 307.486 kb on + strandat 307.526 kb on - strand, within B158DRAFT_2165at 307.543 kb on - strand, within B158DRAFT_2165at 307.643 kb on - strand, within B158DRAFT_2165at 307.654 kb on + strand, within B158DRAFT_2165at 307.662 kb on - strand, within B158DRAFT_2165at 307.749 kb on + strand, within B158DRAFT_2165at 307.749 kb on - strand, within B158DRAFT_2165at 307.749 kb on - strand, within B158DRAFT_2165at 307.754 kb on + strand, within B158DRAFT_2165at 307.777 kb on - strand, within B158DRAFT_2165at 307.790 kb on - strand, within B158DRAFT_2165at 307.808 kb on + strand, within B158DRAFT_2165at 307.808 kb on + strand, within B158DRAFT_2165at 307.808 kb on + strand, within B158DRAFT_2165at 307.816 kb on - strand, within B158DRAFT_2165at 307.818 kb on + strand, within B158DRAFT_2165at 307.826 kb on - strand, within B158DRAFT_2165at 307.828 kb on + strand, within B158DRAFT_2165at 307.828 kb on + strand, within B158DRAFT_2165at 307.837 kb on + strand, within B158DRAFT_2165at 307.845 kb on - strand, within B158DRAFT_2165at 307.958 kb on + strand, within B158DRAFT_2165at 307.980 kb on + strand, within B158DRAFT_2165at 307.980 kb on + strand, within B158DRAFT_2165at 307.988 kb on + strand, within B158DRAFT_2165at 307.988 kb on + strand, within B158DRAFT_2165at 307.988 kb on - strand, within B158DRAFT_2165at 307.996 kb on - strand, within B158DRAFT_2165at 308.201 kb on - strand, within B158DRAFT_2166at 308.218 kb on - strand, within B158DRAFT_2166at 308.244 kb on + strand, within B158DRAFT_2166at 308.244 kb on + strand, within B158DRAFT_2166at 308.244 kb on + strand, within B158DRAFT_2166at 308.244 kb on + strand, within B158DRAFT_2166at 308.252 kb on - strand, within B158DRAFT_2166

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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304,094 + B158DRAFT_2163 0.39 -0.6
304,129 - B158DRAFT_2163 0.41 -0.5
304,129 - B158DRAFT_2163 0.41 -0.1
304,223 - B158DRAFT_2163 0.48 -1.7
304,261 + B158DRAFT_2163 0.50 -0.4
304,261 + B158DRAFT_2163 0.50 -0.5
304,405 + B158DRAFT_2163 0.60 -0.0
304,422 + B158DRAFT_2163 0.61 +0.1
304,466 + B158DRAFT_2163 0.65 +0.1
304,533 - B158DRAFT_2163 0.69 -0.5
304,555 + B158DRAFT_2163 0.71 -1.0
304,563 - B158DRAFT_2163 0.71 -0.9
304,564 + B158DRAFT_2163 0.71 -0.3
304,760 + B158DRAFT_2163 0.85 -0.5
304,818 + B158DRAFT_2163 0.89 -0.0
304,836 + +0.4
305,001 - +0.1
305,111 + -2.0
305,140 + -1.1
305,140 + -0.4
305,203 - -1.3
305,210 + -0.9
305,210 + -2.1
305,218 - -1.5
305,436 + B158DRAFT_2164 0.17 -2.3
305,454 - B158DRAFT_2164 0.18 -1.7
305,522 + B158DRAFT_2164 0.21 -1.9
305,522 + B158DRAFT_2164 0.21 -1.5
305,522 + B158DRAFT_2164 0.21 -1.6
305,530 - B158DRAFT_2164 0.22 -1.7
305,530 - B158DRAFT_2164 0.22 -1.4
305,557 + B158DRAFT_2164 0.23 -1.6
305,575 - B158DRAFT_2164 0.24 -1.1
305,595 + B158DRAFT_2164 0.25 -1.0
305,595 + B158DRAFT_2164 0.25 -1.6
305,603 - B158DRAFT_2164 0.25 -2.7
305,608 - B158DRAFT_2164 0.25 -1.4
305,608 - B158DRAFT_2164 0.25 -0.9
305,622 + B158DRAFT_2164 0.26 -2.0
305,622 + B158DRAFT_2164 0.26 -1.5
305,622 + B158DRAFT_2164 0.26 -1.3
305,622 + B158DRAFT_2164 0.26 -1.9
305,630 - B158DRAFT_2164 0.26 -0.7
305,654 + B158DRAFT_2164 0.27 -1.8
305,662 - B158DRAFT_2164 0.28 -1.6
305,662 - B158DRAFT_2164 0.28 -1.0
305,738 + B158DRAFT_2164 0.31 -2.2
305,738 + B158DRAFT_2164 0.31 -1.8
305,746 - B158DRAFT_2164 0.31 -1.9
305,746 - B158DRAFT_2164 0.31 -1.4
305,878 + B158DRAFT_2164 0.37 -2.9
305,936 + B158DRAFT_2164 0.40 -1.1
305,942 + B158DRAFT_2164 0.40 -1.7
305,942 + B158DRAFT_2164 0.40 -1.6
305,942 + B158DRAFT_2164 0.40 -1.9
305,942 + B158DRAFT_2164 0.40 -0.9
305,948 + B158DRAFT_2164 0.41 -0.4
305,957 - B158DRAFT_2164 0.41 -2.1
306,021 + B158DRAFT_2164 0.44 -1.6
306,029 - B158DRAFT_2164 0.44 -0.9
306,039 - B158DRAFT_2164 0.45 -2.0
306,058 + B158DRAFT_2164 0.46 -0.9
306,092 - B158DRAFT_2164 0.47 -1.3
306,095 + B158DRAFT_2164 0.47 -2.7
306,095 + B158DRAFT_2164 0.47 -1.7
306,095 + B158DRAFT_2164 0.47 -1.4
306,095 + B158DRAFT_2164 0.47 -1.4
306,095 + B158DRAFT_2164 0.47 -3.1
306,100 + B158DRAFT_2164 0.47 -1.7
306,100 + B158DRAFT_2164 0.47 -0.6
306,103 - B158DRAFT_2164 0.48 -1.7
306,182 + B158DRAFT_2164 0.51 -1.6
306,184 + B158DRAFT_2164 0.51 -1.8
306,273 - B158DRAFT_2164 0.55 -2.0
306,292 + B158DRAFT_2164 0.56 -1.3
306,292 + B158DRAFT_2164 0.56 -1.2
306,300 - B158DRAFT_2164 0.56 -1.4
306,383 - B158DRAFT_2164 0.60 -1.2
306,409 - B158DRAFT_2164 0.61 -0.9
306,495 - B158DRAFT_2164 0.65 -2.2
306,522 - B158DRAFT_2164 0.67 -2.4
306,556 - B158DRAFT_2164 0.68 -2.7
306,556 - B158DRAFT_2164 0.68 -1.5
306,564 - B158DRAFT_2164 0.68 -1.4
306,607 - B158DRAFT_2164 0.70 -1.0
306,644 + B158DRAFT_2164 0.72 -1.2
306,651 - B158DRAFT_2164 0.72 -1.8
306,652 - B158DRAFT_2164 0.72 -1.9
306,660 - B158DRAFT_2164 0.73 -1.4
306,670 + B158DRAFT_2164 0.73 -0.8
306,670 + B158DRAFT_2164 0.73 -1.3
306,692 - B158DRAFT_2164 0.74 -1.7
306,770 + B158DRAFT_2164 0.78 -3.8
306,770 - B158DRAFT_2164 0.78 -0.4
306,770 - B158DRAFT_2164 0.78 -1.4
306,804 - B158DRAFT_2164 0.79 -1.1
306,829 + B158DRAFT_2164 0.80 -2.3
306,837 - B158DRAFT_2164 0.81 -0.4
306,837 - B158DRAFT_2164 0.81 -1.5
306,837 - B158DRAFT_2164 0.81 -0.7
306,837 - B158DRAFT_2164 0.81 -0.8
306,837 - B158DRAFT_2164 0.81 -2.4
306,845 + B158DRAFT_2164 0.81 -1.6
306,862 + B158DRAFT_2164 0.82 -1.5
306,932 - B158DRAFT_2164 0.85 -0.7
306,932 - B158DRAFT_2164 0.85 -1.8
306,946 + B158DRAFT_2164 0.86 -2.2
306,954 - B158DRAFT_2164 0.86 -0.9
307,016 + B158DRAFT_2164 0.89 -2.2
307,049 + -1.3
307,049 + -1.6
307,054 + -2.0
307,057 - -1.9
307,057 - -1.9
307,062 - -1.5
307,062 - -1.7
307,064 + -1.9
307,064 + -1.7
307,064 + -1.8
307,072 - -1.8
307,072 - -1.4
307,072 - -2.0
307,192 + -2.9
307,249 - -0.7
307,300 - -0.3
307,321 + -1.7
307,363 + -1.3
307,458 + +0.2
307,486 + -0.5
307,526 - B158DRAFT_2165 0.11 +0.2
307,543 - B158DRAFT_2165 0.14 -0.1
307,643 - B158DRAFT_2165 0.30 -0.7
307,654 + B158DRAFT_2165 0.32 -0.0
307,662 - B158DRAFT_2165 0.33 -0.4
307,749 + B158DRAFT_2165 0.47 -0.6
307,749 - B158DRAFT_2165 0.47 +0.0
307,749 - B158DRAFT_2165 0.47 +0.2
307,754 + B158DRAFT_2165 0.48 +0.5
307,777 - B158DRAFT_2165 0.51 -0.8
307,790 - B158DRAFT_2165 0.53 -0.3
307,808 + B158DRAFT_2165 0.56 +0.2
307,808 + B158DRAFT_2165 0.56 -0.0
307,808 + B158DRAFT_2165 0.56 +0.1
307,816 - B158DRAFT_2165 0.58 -0.4
307,818 + B158DRAFT_2165 0.58 -0.2
307,826 - B158DRAFT_2165 0.59 -1.1
307,828 + B158DRAFT_2165 0.59 +0.1
307,828 + B158DRAFT_2165 0.59 +0.6
307,837 + B158DRAFT_2165 0.61 +0.1
307,845 - B158DRAFT_2165 0.62 -0.6
307,958 + B158DRAFT_2165 0.80 -0.5
307,980 + B158DRAFT_2165 0.84 -0.4
307,980 + B158DRAFT_2165 0.84 +0.4
307,988 + B158DRAFT_2165 0.85 -0.1
307,988 + B158DRAFT_2165 0.85 +0.5
307,988 - B158DRAFT_2165 0.85 +0.3
307,996 - B158DRAFT_2165 0.86 +0.3
308,201 - B158DRAFT_2166 0.11 +0.7
308,218 - B158DRAFT_2166 0.13 +0.1
308,244 + B158DRAFT_2166 0.15 +0.0
308,244 + B158DRAFT_2166 0.15 -0.4
308,244 + B158DRAFT_2166 0.15 -0.7
308,244 + B158DRAFT_2166 0.15 -0.0
308,252 - B158DRAFT_2166 0.16 -0.2

Or see this region's nucleotide sequence