Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1985 and B158DRAFT_1986 are separated by 52 nucleotides B158DRAFT_1986 and B158DRAFT_1987 are separated by 77 nucleotides B158DRAFT_1987 and B158DRAFT_1988 are separated by 105 nucleotides B158DRAFT_1988 and B158DRAFT_1989 are separated by 145 nucleotides
B158DRAFT_1985: B158DRAFT_1985 - hypothetical protein, at 121,304 to 121,723
_1985
B158DRAFT_1986: B158DRAFT_1986 - hypothetical protein, at 121,776 to 122,312
_1986
B158DRAFT_1987: B158DRAFT_1987 - D-alpha,beta-D-heptose 7-phosphate 1-kinase (EC 2.7.1.167)/D-beta-D-heptose 1-phosphate adenylyltransferase (EC 2.7.7.70), at 122,390 to 123,853
_1987
B158DRAFT_1988: B158DRAFT_1988 - hypothetical protein, at 123,959 to 124,249
_1988
B158DRAFT_1989: B158DRAFT_1989 - ribonuclease R, at 124,395 to 126,809
_1989
Position (kb) 122
123
124 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 121.519 kb on - strand, within B158DRAFT_1985 at 121.596 kb on + strand, within B158DRAFT_1985 at 121.618 kb on + strand, within B158DRAFT_1985 at 121.618 kb on + strand, within B158DRAFT_1985 at 121.618 kb on + strand, within B158DRAFT_1985 at 121.626 kb on - strand, within B158DRAFT_1985 at 121.626 kb on - strand, within B158DRAFT_1985 at 121.626 kb on - strand, within B158DRAFT_1985 at 121.626 kb on - strand, within B158DRAFT_1985 at 121.626 kb on - strand, within B158DRAFT_1985 at 121.626 kb on - strand, within B158DRAFT_1985 at 121.626 kb on - strand, within B158DRAFT_1985 at 121.626 kb on - strand, within B158DRAFT_1985 at 121.687 kb on + strand at 121.803 kb on + strand at 121.938 kb on - strand, within B158DRAFT_1986 at 121.998 kb on + strand, within B158DRAFT_1986 at 121.998 kb on + strand, within B158DRAFT_1986 at 121.998 kb on - strand, within B158DRAFT_1986 at 121.999 kb on - strand, within B158DRAFT_1986 at 122.006 kb on - strand, within B158DRAFT_1986 at 122.014 kb on - strand, within B158DRAFT_1986 at 122.064 kb on - strand, within B158DRAFT_1986 at 122.098 kb on - strand, within B158DRAFT_1986 at 122.110 kb on - strand, within B158DRAFT_1986 at 122.146 kb on - strand, within B158DRAFT_1986 at 122.262 kb on + strand at 122.270 kb on - strand at 122.298 kb on + strand at 122.343 kb on + strand at 122.351 kb on + strand at 122.371 kb on - strand at 122.383 kb on + strand at 122.502 kb on + strand at 122.565 kb on - strand, within B158DRAFT_1987 at 122.586 kb on + strand, within B158DRAFT_1987 at 122.624 kb on + strand, within B158DRAFT_1987 at 122.651 kb on + strand, within B158DRAFT_1987 at 122.651 kb on + strand, within B158DRAFT_1987 at 122.658 kb on + strand, within B158DRAFT_1987 at 122.659 kb on - strand, within B158DRAFT_1987 at 122.667 kb on - strand, within B158DRAFT_1987 at 122.679 kb on - strand, within B158DRAFT_1987 at 122.687 kb on + strand, within B158DRAFT_1987 at 122.735 kb on - strand, within B158DRAFT_1987 at 122.735 kb on - strand, within B158DRAFT_1987 at 122.831 kb on + strand, within B158DRAFT_1987 at 122.841 kb on + strand, within B158DRAFT_1987 at 122.843 kb on + strand, within B158DRAFT_1987 at 122.880 kb on + strand, within B158DRAFT_1987 at 122.880 kb on + strand, within B158DRAFT_1987 at 122.880 kb on + strand, within B158DRAFT_1987 at 122.893 kb on - strand, within B158DRAFT_1987 at 122.967 kb on - strand, within B158DRAFT_1987 at 122.974 kb on + strand, within B158DRAFT_1987 at 122.974 kb on + strand, within B158DRAFT_1987 at 122.999 kb on + strand, within B158DRAFT_1987 at 122.999 kb on + strand, within B158DRAFT_1987 at 122.999 kb on + strand, within B158DRAFT_1987 at 123.007 kb on - strand, within B158DRAFT_1987 at 123.007 kb on - strand, within B158DRAFT_1987 at 123.030 kb on - strand, within B158DRAFT_1987 at 123.044 kb on + strand, within B158DRAFT_1987 at 123.052 kb on - strand, within B158DRAFT_1987 at 123.098 kb on + strand, within B158DRAFT_1987 at 123.155 kb on - strand, within B158DRAFT_1987 at 123.234 kb on - strand, within B158DRAFT_1987 at 123.264 kb on - strand, within B158DRAFT_1987 at 123.265 kb on + strand, within B158DRAFT_1987 at 123.273 kb on - strand, within B158DRAFT_1987 at 123.366 kb on - strand, within B158DRAFT_1987 at 123.394 kb on + strand, within B158DRAFT_1987 at 123.402 kb on - strand, within B158DRAFT_1987 at 123.404 kb on - strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.406 kb on + strand, within B158DRAFT_1987 at 123.413 kb on + strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.414 kb on - strand, within B158DRAFT_1987 at 123.418 kb on + strand, within B158DRAFT_1987 at 123.461 kb on - strand, within B158DRAFT_1987 at 123.503 kb on + strand, within B158DRAFT_1987 at 123.503 kb on + strand, within B158DRAFT_1987 at 123.503 kb on + strand, within B158DRAFT_1987 at 123.503 kb on + strand, within B158DRAFT_1987 at 123.503 kb on + strand, within B158DRAFT_1987 at 123.511 kb on - strand, within B158DRAFT_1987 at 123.511 kb on - strand, within B158DRAFT_1987 at 123.511 kb on - strand, within B158DRAFT_1987 at 123.547 kb on - strand, within B158DRAFT_1987 at 123.581 kb on + strand, within B158DRAFT_1987 at 123.581 kb on + strand, within B158DRAFT_1987 at 123.581 kb on + strand, within B158DRAFT_1987 at 123.606 kb on - strand, within B158DRAFT_1987 at 123.637 kb on + strand, within B158DRAFT_1987 at 123.727 kb on + strand at 123.796 kb on + strand at 123.909 kb on + strand at 123.909 kb on + strand at 123.909 kb on + strand at 123.909 kb on + strand at 123.909 kb on + strand at 123.909 kb on + strand at 123.917 kb on - strand at 123.917 kb on - strand at 123.917 kb on - strand at 123.917 kb on - strand at 123.917 kb on - strand at 123.933 kb on - strand at 124.007 kb on + strand, within B158DRAFT_1988 at 124.007 kb on + strand, within B158DRAFT_1988 at 124.007 kb on + strand, within B158DRAFT_1988 at 124.007 kb on + strand, within B158DRAFT_1988 at 124.007 kb on + strand, within B158DRAFT_1988 at 124.007 kb on + strand, within B158DRAFT_1988 at 124.007 kb on + strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.015 kb on - strand, within B158DRAFT_1988 at 124.061 kb on + strand, within B158DRAFT_1988 at 124.069 kb on - strand, within B158DRAFT_1988 at 124.074 kb on + strand, within B158DRAFT_1988 at 124.082 kb on - strand, within B158DRAFT_1988 at 124.089 kb on + strand, within B158DRAFT_1988 at 124.092 kb on - strand, within B158DRAFT_1988 at 124.119 kb on + strand, within B158DRAFT_1988 at 124.128 kb on + strand, within B158DRAFT_1988 at 124.132 kb on - strand, within B158DRAFT_1988 at 124.137 kb on - strand, within B158DRAFT_1988 at 124.173 kb on + strand, within B158DRAFT_1988 at 124.173 kb on + strand, within B158DRAFT_1988 at 124.173 kb on + strand, within B158DRAFT_1988 at 124.173 kb on + strand, within B158DRAFT_1988 at 124.173 kb on + strand, within B158DRAFT_1988 at 124.181 kb on - strand, within B158DRAFT_1988 at 124.181 kb on - strand, within B158DRAFT_1988 at 124.181 kb on - strand, within B158DRAFT_1988 at 124.181 kb on - strand, within B158DRAFT_1988 at 124.181 kb on - strand, within B158DRAFT_1988 at 124.219 kb on + strand, within B158DRAFT_1988 at 124.251 kb on - strand at 124.297 kb on + strand at 124.349 kb on - strand at 124.359 kb on + strand at 124.418 kb on + strand at 124.426 kb on - strand at 124.426 kb on - strand at 124.454 kb on + strand at 124.494 kb on - strand at 124.494 kb on - strand at 124.513 kb on + strand at 124.521 kb on - strand at 124.521 kb on - strand at 124.542 kb on - strand at 124.549 kb on + strand at 124.549 kb on + strand at 124.549 kb on + strand at 124.549 kb on + strand at 124.549 kb on + strand at 124.554 kb on + strand at 124.557 kb on - strand at 124.557 kb on - strand at 124.559 kb on + strand at 124.559 kb on + strand at 124.559 kb on + strand at 124.562 kb on - strand at 124.567 kb on - strand at 124.586 kb on - strand at 124.626 kb on + strand at 124.636 kb on - strand at 124.768 kb on + strand, within B158DRAFT_1989
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 121,519 - B158DRAFT_1985 0.51 -0.3 121,596 + B158DRAFT_1985 0.70 +0.5 121,618 + B158DRAFT_1985 0.75 +0.8 121,618 + B158DRAFT_1985 0.75 -0.3 121,618 + B158DRAFT_1985 0.75 -0.4 121,626 - B158DRAFT_1985 0.77 -0.0 121,626 - B158DRAFT_1985 0.77 +0.0 121,626 - B158DRAFT_1985 0.77 -0.3 121,626 - B158DRAFT_1985 0.77 -0.1 121,626 - B158DRAFT_1985 0.77 +0.5 121,626 - B158DRAFT_1985 0.77 -0.7 121,626 - B158DRAFT_1985 0.77 +0.3 121,626 - B158DRAFT_1985 0.77 -0.0 121,687 + +0.2 121,803 + -0.1 121,938 - B158DRAFT_1986 0.30 -0.2 121,998 + B158DRAFT_1986 0.41 -0.5 121,998 + B158DRAFT_1986 0.41 +0.3 121,998 - B158DRAFT_1986 0.41 -1.0 121,999 - B158DRAFT_1986 0.42 -0.1 122,006 - B158DRAFT_1986 0.43 -0.1 122,014 - B158DRAFT_1986 0.44 -0.5 122,064 - B158DRAFT_1986 0.54 -0.8 122,098 - B158DRAFT_1986 0.60 -0.3 122,110 - B158DRAFT_1986 0.62 -0.3 122,146 - B158DRAFT_1986 0.69 +1.1 122,262 + -0.4 122,270 - +0.1 122,298 + +0.1 122,343 + +0.2 122,351 + -0.3 122,371 - +0.1 122,383 + +0.3 122,502 + -3.8 122,565 - B158DRAFT_1987 0.12 -3.9 122,586 + B158DRAFT_1987 0.13 -4.0 122,624 + B158DRAFT_1987 0.16 -2.7 122,651 + B158DRAFT_1987 0.18 -6.0 122,651 + B158DRAFT_1987 0.18 -4.7 122,658 + B158DRAFT_1987 0.18 -2.9 122,659 - B158DRAFT_1987 0.18 -2.9 122,667 - B158DRAFT_1987 0.19 -5.3 122,679 - B158DRAFT_1987 0.20 -3.7 122,687 + B158DRAFT_1987 0.20 -6.1 122,735 - B158DRAFT_1987 0.24 -5.4 122,735 - B158DRAFT_1987 0.24 -3.0 122,831 + B158DRAFT_1987 0.30 -3.2 122,841 + B158DRAFT_1987 0.31 -3.6 122,843 + B158DRAFT_1987 0.31 -3.6 122,880 + B158DRAFT_1987 0.33 -2.0 122,880 + B158DRAFT_1987 0.33 -5.5 122,880 + B158DRAFT_1987 0.33 -3.1 122,893 - B158DRAFT_1987 0.34 -6.2 122,967 - B158DRAFT_1987 0.39 -3.9 122,974 + B158DRAFT_1987 0.40 -4.3 122,974 + B158DRAFT_1987 0.40 -5.4 122,999 + B158DRAFT_1987 0.42 -3.3 122,999 + B158DRAFT_1987 0.42 -4.8 122,999 + B158DRAFT_1987 0.42 -5.7 123,007 - B158DRAFT_1987 0.42 -4.7 123,007 - B158DRAFT_1987 0.42 -6.0 123,030 - B158DRAFT_1987 0.44 -5.2 123,044 + B158DRAFT_1987 0.45 -4.2 123,052 - B158DRAFT_1987 0.45 -4.1 123,098 + B158DRAFT_1987 0.48 -5.1 123,155 - B158DRAFT_1987 0.52 -3.4 123,234 - B158DRAFT_1987 0.58 -4.8 123,264 - B158DRAFT_1987 0.60 -3.2 123,265 + B158DRAFT_1987 0.60 -3.8 123,273 - B158DRAFT_1987 0.60 -4.1 123,366 - B158DRAFT_1987 0.67 -3.6 123,394 + B158DRAFT_1987 0.69 -4.4 123,402 - B158DRAFT_1987 0.69 -5.5 123,404 - B158DRAFT_1987 0.69 -6.4 123,406 + B158DRAFT_1987 0.69 -4.9 123,406 + B158DRAFT_1987 0.69 -3.2 123,406 + B158DRAFT_1987 0.69 -4.2 123,406 + B158DRAFT_1987 0.69 -3.5 123,406 + B158DRAFT_1987 0.69 -5.0 123,406 + B158DRAFT_1987 0.69 -4.9 123,406 + B158DRAFT_1987 0.69 -4.5 123,406 + B158DRAFT_1987 0.69 -3.3 123,406 + B158DRAFT_1987 0.69 -3.7 123,406 + B158DRAFT_1987 0.69 -4.3 123,406 + B158DRAFT_1987 0.69 -2.8 123,413 + B158DRAFT_1987 0.70 -4.5 123,414 - B158DRAFT_1987 0.70 -5.6 123,414 - B158DRAFT_1987 0.70 -3.7 123,414 - B158DRAFT_1987 0.70 -4.5 123,414 - B158DRAFT_1987 0.70 -5.1 123,414 - B158DRAFT_1987 0.70 -3.8 123,414 - B158DRAFT_1987 0.70 -5.3 123,414 - B158DRAFT_1987 0.70 -3.9 123,414 - B158DRAFT_1987 0.70 -3.3 123,418 + B158DRAFT_1987 0.70 -5.3 123,461 - B158DRAFT_1987 0.73 -3.6 123,503 + B158DRAFT_1987 0.76 -5.6 123,503 + B158DRAFT_1987 0.76 -4.6 123,503 + B158DRAFT_1987 0.76 -4.0 123,503 + B158DRAFT_1987 0.76 -5.5 123,503 + B158DRAFT_1987 0.76 -4.1 123,511 - B158DRAFT_1987 0.77 -1.6 123,511 - B158DRAFT_1987 0.77 -3.8 123,511 - B158DRAFT_1987 0.77 -4.1 123,547 - B158DRAFT_1987 0.79 -2.9 123,581 + B158DRAFT_1987 0.81 -4.4 123,581 + B158DRAFT_1987 0.81 -4.5 123,581 + B158DRAFT_1987 0.81 -6.1 123,606 - B158DRAFT_1987 0.83 -4.6 123,637 + B158DRAFT_1987 0.85 -3.9 123,727 + -2.8 123,796 + -5.9 123,909 + -0.5 123,909 + -0.5 123,909 + +0.0 123,909 + +0.2 123,909 + -0.1 123,909 + -0.7 123,917 - -0.3 123,917 - -0.2 123,917 - -0.5 123,917 - +0.8 123,917 - -0.3 123,933 - -0.4 124,007 + B158DRAFT_1988 0.16 -0.3 124,007 + B158DRAFT_1988 0.16 -0.5 124,007 + B158DRAFT_1988 0.16 -0.1 124,007 + B158DRAFT_1988 0.16 +0.2 124,007 + B158DRAFT_1988 0.16 -0.3 124,007 + B158DRAFT_1988 0.16 -0.1 124,007 + B158DRAFT_1988 0.16 -0.9 124,015 - B158DRAFT_1988 0.19 -0.2 124,015 - B158DRAFT_1988 0.19 +0.0 124,015 - B158DRAFT_1988 0.19 -0.5 124,015 - B158DRAFT_1988 0.19 -0.2 124,015 - B158DRAFT_1988 0.19 -0.0 124,015 - B158DRAFT_1988 0.19 +0.2 124,015 - B158DRAFT_1988 0.19 -0.2 124,015 - B158DRAFT_1988 0.19 -0.6 124,015 - B158DRAFT_1988 0.19 -0.2 124,015 - B158DRAFT_1988 0.19 -0.4 124,015 - B158DRAFT_1988 0.19 +0.4 124,015 - B158DRAFT_1988 0.19 -0.2 124,061 + B158DRAFT_1988 0.35 +0.3 124,069 - B158DRAFT_1988 0.38 -0.8 124,074 + B158DRAFT_1988 0.40 -0.0 124,082 - B158DRAFT_1988 0.42 -0.6 124,089 + B158DRAFT_1988 0.45 -0.5 124,092 - B158DRAFT_1988 0.46 +0.3 124,119 + B158DRAFT_1988 0.55 +0.2 124,128 + B158DRAFT_1988 0.58 -0.0 124,132 - B158DRAFT_1988 0.59 +0.1 124,137 - B158DRAFT_1988 0.61 -0.3 124,173 + B158DRAFT_1988 0.74 +0.2 124,173 + B158DRAFT_1988 0.74 +0.5 124,173 + B158DRAFT_1988 0.74 -0.4 124,173 + B158DRAFT_1988 0.74 -0.1 124,173 + B158DRAFT_1988 0.74 -0.2 124,181 - B158DRAFT_1988 0.76 -0.4 124,181 - B158DRAFT_1988 0.76 -0.1 124,181 - B158DRAFT_1988 0.76 +0.1 124,181 - B158DRAFT_1988 0.76 -0.6 124,181 - B158DRAFT_1988 0.76 +0.2 124,219 + B158DRAFT_1988 0.89 -0.6 124,251 - -0.3 124,297 + -0.4 124,349 - -0.1 124,359 + -0.4 124,418 + +0.4 124,426 - +1.0 124,426 - -0.0 124,454 + +0.4 124,494 - +1.3 124,494 - +1.5 124,513 + +0.5 124,521 - +0.5 124,521 - +0.3 124,542 - +1.2 124,549 + +0.0 124,549 + +0.1 124,549 + +0.3 124,549 + +0.6 124,549 + +0.8 124,554 + +0.0 124,557 - +0.7 124,557 - -0.0 124,559 + +0.8 124,559 + +0.3 124,559 + +0.4 124,562 - +1.0 124,567 - +0.6 124,586 - +0.0 124,626 + +0.5 124,636 - +0.2 124,768 + B158DRAFT_1989 0.15 +0.6
Or see this region's nucleotide sequence