Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1982 and B158DRAFT_1983 are separated by 45 nucleotides B158DRAFT_1983 and B158DRAFT_1984 are separated by 162 nucleotides B158DRAFT_1984 and B158DRAFT_1985 are separated by 285 nucleotides B158DRAFT_1985 and B158DRAFT_1986 are separated by 52 nucleotides
B158DRAFT_1982: B158DRAFT_1982 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 118,739 to 119,452
_1982
B158DRAFT_1983: B158DRAFT_1983 - Protein of unknown function (DUF1282)., at 119,498 to 120,094
_1983
B158DRAFT_1984: B158DRAFT_1984 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 120,257 to 121,018
_1984
B158DRAFT_1985: B158DRAFT_1985 - hypothetical protein, at 121,304 to 121,723
_1985
B158DRAFT_1986: B158DRAFT_1986 - hypothetical protein, at 121,776 to 122,312
_1986
Position (kb) 120
121
122 Strain fitness (log2 ratio) -2
-1
0
1 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.271 kb on + strand, within B158DRAFT_1982 at 119.279 kb on - strand, within B158DRAFT_1982 at 119.279 kb on - strand, within B158DRAFT_1982 at 119.279 kb on - strand, within B158DRAFT_1982 at 119.279 kb on - strand, within B158DRAFT_1982 at 119.279 kb on - strand, within B158DRAFT_1982 at 119.339 kb on - strand, within B158DRAFT_1982 at 119.442 kb on - strand at 119.480 kb on + strand at 119.480 kb on + strand at 119.480 kb on + strand at 119.488 kb on + strand at 119.488 kb on - strand at 119.488 kb on - strand at 119.488 kb on - strand at 119.488 kb on - strand at 119.491 kb on - strand at 119.491 kb on - strand at 119.546 kb on - strand at 119.606 kb on + strand, within B158DRAFT_1983 at 119.614 kb on - strand, within B158DRAFT_1983 at 119.642 kb on + strand, within B158DRAFT_1983 at 119.642 kb on + strand, within B158DRAFT_1983 at 119.642 kb on + strand, within B158DRAFT_1983 at 119.642 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.644 kb on + strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.650 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.652 kb on - strand, within B158DRAFT_1983 at 119.691 kb on + strand, within B158DRAFT_1983 at 119.785 kb on - strand, within B158DRAFT_1983 at 119.887 kb on + strand, within B158DRAFT_1983 at 119.892 kb on + strand, within B158DRAFT_1983 at 119.895 kb on - strand, within B158DRAFT_1983 at 119.895 kb on - strand, within B158DRAFT_1983 at 119.897 kb on + strand, within B158DRAFT_1983 at 119.897 kb on + strand, within B158DRAFT_1983 at 119.905 kb on - strand, within B158DRAFT_1983 at 119.915 kb on - strand, within B158DRAFT_1983 at 119.918 kb on + strand, within B158DRAFT_1983 at 119.997 kb on + strand, within B158DRAFT_1983 at 120.009 kb on + strand, within B158DRAFT_1983 at 120.015 kb on + strand, within B158DRAFT_1983 at 120.033 kb on - strand, within B158DRAFT_1983 at 120.048 kb on + strand at 120.080 kb on + strand at 120.080 kb on + strand at 120.088 kb on - strand at 120.088 kb on - strand at 120.088 kb on - strand at 120.149 kb on - strand at 120.153 kb on + strand at 120.153 kb on + strand at 120.161 kb on - strand at 120.161 kb on - strand at 120.161 kb on - strand at 120.161 kb on - strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.189 kb on + strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.197 kb on - strand at 120.325 kb on - strand at 120.327 kb on + strand at 120.335 kb on - strand, within B158DRAFT_1984 at 120.335 kb on - strand, within B158DRAFT_1984 at 120.387 kb on - strand, within B158DRAFT_1984 at 120.451 kb on - strand, within B158DRAFT_1984 at 120.568 kb on + strand, within B158DRAFT_1984 at 120.575 kb on + strand, within B158DRAFT_1984 at 120.577 kb on - strand, within B158DRAFT_1984 at 120.706 kb on + strand, within B158DRAFT_1984 at 120.706 kb on + strand, within B158DRAFT_1984 at 120.706 kb on + strand, within B158DRAFT_1984 at 120.714 kb on - strand, within B158DRAFT_1984 at 120.714 kb on - strand, within B158DRAFT_1984 at 120.730 kb on + strand, within B158DRAFT_1984 at 120.730 kb on + strand, within B158DRAFT_1984 at 120.730 kb on + strand, within B158DRAFT_1984 at 120.730 kb on + strand, within B158DRAFT_1984 at 120.738 kb on - strand, within B158DRAFT_1984 at 120.738 kb on - strand, within B158DRAFT_1984 at 120.738 kb on - strand, within B158DRAFT_1984 at 120.748 kb on - strand, within B158DRAFT_1984 at 120.796 kb on - strand, within B158DRAFT_1984 at 120.811 kb on + strand, within B158DRAFT_1984 at 120.867 kb on + strand, within B158DRAFT_1984 at 121.012 kb on + strand at 121.077 kb on + strand at 121.078 kb on + strand at 121.093 kb on - strand at 121.114 kb on - strand at 121.114 kb on - strand at 121.119 kb on - strand at 121.147 kb on + strand at 121.170 kb on + strand at 121.180 kb on + strand at 121.180 kb on + strand at 121.180 kb on + strand at 121.180 kb on + strand at 121.180 kb on + strand at 121.180 kb on + strand at 121.180 kb on + strand at 121.180 kb on + strand at 121.180 kb on + strand at 121.180 kb on + strand at 121.180 kb on + strand at 121.180 kb on + strand at 121.188 kb on - strand at 121.188 kb on - strand at 121.188 kb on - strand at 121.188 kb on - strand at 121.188 kb on - strand at 121.188 kb on - strand at 121.188 kb on - strand at 121.188 kb on - strand at 121.302 kb on - strand at 121.302 kb on - strand at 121.310 kb on + strand at 121.519 kb on - strand, within B158DRAFT_1985 at 121.596 kb on + strand, within B158DRAFT_1985 at 121.618 kb on + strand, within B158DRAFT_1985 at 121.618 kb on + strand, within B158DRAFT_1985 at 121.618 kb on + strand, within B158DRAFT_1985 at 121.626 kb on - strand, within B158DRAFT_1985 at 121.626 kb on - strand, within B158DRAFT_1985 at 121.626 kb on - strand, within B158DRAFT_1985 at 121.626 kb on - strand, within B158DRAFT_1985 at 121.626 kb on - strand, within B158DRAFT_1985 at 121.626 kb on - strand, within B158DRAFT_1985 at 121.626 kb on - strand, within B158DRAFT_1985 at 121.626 kb on - strand, within B158DRAFT_1985 at 121.687 kb on + strand at 121.803 kb on + strand at 121.938 kb on - strand, within B158DRAFT_1986 at 121.998 kb on + strand, within B158DRAFT_1986 at 121.998 kb on + strand, within B158DRAFT_1986 at 121.998 kb on - strand, within B158DRAFT_1986 at 121.999 kb on - strand, within B158DRAFT_1986 at 122.006 kb on - strand, within B158DRAFT_1986 at 122.014 kb on - strand, within B158DRAFT_1986
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 119,271 + B158DRAFT_1982 0.75 +0.1 119,271 + B158DRAFT_1982 0.75 +0.7 119,271 + B158DRAFT_1982 0.75 -1.4 119,271 + B158DRAFT_1982 0.75 +0.3 119,271 + B158DRAFT_1982 0.75 -1.1 119,271 + B158DRAFT_1982 0.75 +0.1 119,271 + B158DRAFT_1982 0.75 +0.6 119,271 + B158DRAFT_1982 0.75 +0.3 119,271 + B158DRAFT_1982 0.75 -0.6 119,279 - B158DRAFT_1982 0.76 +0.5 119,279 - B158DRAFT_1982 0.76 -0.2 119,279 - B158DRAFT_1982 0.76 -0.0 119,279 - B158DRAFT_1982 0.76 -0.5 119,279 - B158DRAFT_1982 0.76 +0.3 119,339 - B158DRAFT_1982 0.84 +0.1 119,442 - -0.3 119,480 + -0.3 119,480 + +0.1 119,480 + -0.0 119,488 + +0.0 119,488 - +0.3 119,488 - -0.8 119,488 - -0.4 119,488 - -0.6 119,491 - -0.2 119,491 - +0.4 119,546 - -0.7 119,606 + B158DRAFT_1983 0.18 +0.2 119,614 - B158DRAFT_1983 0.19 +0.0 119,642 + B158DRAFT_1983 0.24 +0.6 119,642 + B158DRAFT_1983 0.24 -0.5 119,642 + B158DRAFT_1983 0.24 -0.3 119,642 + B158DRAFT_1983 0.24 -1.2 119,644 + B158DRAFT_1983 0.24 -0.1 119,644 + B158DRAFT_1983 0.24 -0.0 119,644 + B158DRAFT_1983 0.24 -0.2 119,644 + B158DRAFT_1983 0.24 +0.0 119,644 + B158DRAFT_1983 0.24 +0.7 119,644 + B158DRAFT_1983 0.24 -1.8 119,644 + B158DRAFT_1983 0.24 +0.4 119,644 + B158DRAFT_1983 0.24 +0.9 119,650 - B158DRAFT_1983 0.25 -0.2 119,650 - B158DRAFT_1983 0.25 +0.2 119,650 - B158DRAFT_1983 0.25 -0.4 119,650 - B158DRAFT_1983 0.25 +0.2 119,650 - B158DRAFT_1983 0.25 -0.1 119,650 - B158DRAFT_1983 0.25 +0.2 119,650 - B158DRAFT_1983 0.25 +0.1 119,650 - B158DRAFT_1983 0.25 -0.3 119,650 - B158DRAFT_1983 0.25 -0.4 119,652 - B158DRAFT_1983 0.26 +0.5 119,652 - B158DRAFT_1983 0.26 +0.3 119,652 - B158DRAFT_1983 0.26 +0.2 119,652 - B158DRAFT_1983 0.26 -0.4 119,652 - B158DRAFT_1983 0.26 -1.1 119,652 - B158DRAFT_1983 0.26 -0.3 119,652 - B158DRAFT_1983 0.26 -0.2 119,652 - B158DRAFT_1983 0.26 +0.6 119,652 - B158DRAFT_1983 0.26 +0.2 119,652 - B158DRAFT_1983 0.26 -0.0 119,691 + B158DRAFT_1983 0.32 -1.5 119,785 - B158DRAFT_1983 0.48 -0.4 119,887 + B158DRAFT_1983 0.65 +0.0 119,892 + B158DRAFT_1983 0.66 +0.2 119,895 - B158DRAFT_1983 0.66 -0.5 119,895 - B158DRAFT_1983 0.66 +0.3 119,897 + B158DRAFT_1983 0.67 -0.2 119,897 + B158DRAFT_1983 0.67 +0.3 119,905 - B158DRAFT_1983 0.68 +0.5 119,915 - B158DRAFT_1983 0.70 -0.3 119,918 + B158DRAFT_1983 0.70 -0.1 119,997 + B158DRAFT_1983 0.84 -0.1 120,009 + B158DRAFT_1983 0.86 -0.1 120,015 + B158DRAFT_1983 0.87 +0.1 120,033 - B158DRAFT_1983 0.90 -0.8 120,048 + -0.7 120,080 + +0.1 120,080 + +0.2 120,088 - -0.1 120,088 - -0.2 120,088 - -0.6 120,149 - +0.6 120,153 + +0.2 120,153 + +0.4 120,161 - -0.6 120,161 - -0.1 120,161 - +1.0 120,161 - -0.2 120,189 + -0.3 120,189 + -0.4 120,189 + +0.3 120,189 + +0.2 120,189 + -0.3 120,189 + +0.2 120,189 + +0.0 120,189 + -1.1 120,189 + +0.0 120,189 + -0.4 120,189 + +0.3 120,189 + -0.7 120,189 + +0.0 120,189 + -0.2 120,189 + +0.2 120,189 + -0.7 120,189 + -0.7 120,189 + +0.1 120,189 + +0.2 120,189 + -0.0 120,189 + -0.6 120,189 + -0.5 120,189 + +0.6 120,189 + -0.6 120,189 + +0.1 120,189 + -0.0 120,189 + -0.1 120,189 + +0.5 120,189 + -0.0 120,189 + +0.5 120,197 - +0.2 120,197 - +0.0 120,197 - +0.0 120,197 - +0.7 120,197 - -0.3 120,197 - -1.1 120,197 - -1.8 120,197 - -0.1 120,197 - -0.1 120,197 - +0.0 120,197 - +0.3 120,197 - -0.2 120,197 - +0.4 120,197 - +0.6 120,197 - -0.1 120,197 - -0.4 120,197 - -0.6 120,197 - -0.9 120,197 - -0.3 120,197 - -0.2 120,197 - -0.4 120,197 - -0.3 120,197 - -0.5 120,197 - +0.0 120,197 - -0.7 120,197 - -0.1 120,197 - -0.1 120,197 - +0.6 120,197 - -0.7 120,197 - +0.1 120,197 - -0.3 120,197 - -0.3 120,325 - -0.4 120,327 + -0.2 120,335 - B158DRAFT_1984 0.10 +0.5 120,335 - B158DRAFT_1984 0.10 -0.4 120,387 - B158DRAFT_1984 0.17 -0.5 120,451 - B158DRAFT_1984 0.25 -0.9 120,568 + B158DRAFT_1984 0.41 -0.3 120,575 + B158DRAFT_1984 0.42 -0.7 120,577 - B158DRAFT_1984 0.42 -0.3 120,706 + B158DRAFT_1984 0.59 -0.2 120,706 + B158DRAFT_1984 0.59 -0.7 120,706 + B158DRAFT_1984 0.59 +0.0 120,714 - B158DRAFT_1984 0.60 -0.3 120,714 - B158DRAFT_1984 0.60 -0.1 120,730 + B158DRAFT_1984 0.62 -0.4 120,730 + B158DRAFT_1984 0.62 -0.4 120,730 + B158DRAFT_1984 0.62 -0.1 120,730 + B158DRAFT_1984 0.62 +0.2 120,738 - B158DRAFT_1984 0.63 -0.1 120,738 - B158DRAFT_1984 0.63 -0.0 120,738 - B158DRAFT_1984 0.63 -0.0 120,748 - B158DRAFT_1984 0.64 -0.0 120,796 - B158DRAFT_1984 0.71 -0.8 120,811 + B158DRAFT_1984 0.73 +0.0 120,867 + B158DRAFT_1984 0.80 +0.2 121,012 + -0.4 121,077 + +0.3 121,078 + +0.5 121,093 - +1.1 121,114 - -0.2 121,114 - +0.1 121,119 - -0.1 121,147 + +1.1 121,170 + -0.4 121,180 + -0.2 121,180 + -0.0 121,180 + -1.6 121,180 + +0.4 121,180 + +0.6 121,180 + +0.0 121,180 + +0.2 121,180 + +0.1 121,180 + +0.0 121,180 + -0.9 121,180 + +0.2 121,180 + -0.4 121,188 - -0.6 121,188 - -0.3 121,188 - +0.2 121,188 - -0.9 121,188 - -0.2 121,188 - -0.2 121,188 - -0.0 121,188 - -0.2 121,302 - +0.4 121,302 - -0.0 121,310 + -0.1 121,519 - B158DRAFT_1985 0.51 -0.3 121,596 + B158DRAFT_1985 0.70 +0.5 121,618 + B158DRAFT_1985 0.75 +0.8 121,618 + B158DRAFT_1985 0.75 -0.3 121,618 + B158DRAFT_1985 0.75 -0.4 121,626 - B158DRAFT_1985 0.77 -0.0 121,626 - B158DRAFT_1985 0.77 +0.0 121,626 - B158DRAFT_1985 0.77 -0.3 121,626 - B158DRAFT_1985 0.77 -0.1 121,626 - B158DRAFT_1985 0.77 +0.5 121,626 - B158DRAFT_1985 0.77 -0.7 121,626 - B158DRAFT_1985 0.77 +0.3 121,626 - B158DRAFT_1985 0.77 -0.0 121,687 + +0.2 121,803 + -0.1 121,938 - B158DRAFT_1986 0.30 -0.2 121,998 + B158DRAFT_1986 0.41 -0.5 121,998 + B158DRAFT_1986 0.41 +0.3 121,998 - B158DRAFT_1986 0.41 -1.0 121,999 - B158DRAFT_1986 0.42 -0.1 122,006 - B158DRAFT_1986 0.43 -0.1 122,014 - B158DRAFT_1986 0.44 -0.5
Or see this region's nucleotide sequence