Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1821

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1820 and B158DRAFT_1821 are separated by 550 nucleotidesB158DRAFT_1821 and B158DRAFT_1822 are separated by 92 nucleotidesB158DRAFT_1822 and B158DRAFT_1823 are separated by 141 nucleotides B158DRAFT_1820: B158DRAFT_1820 - periplasmic chaperone LolA, at 1,918,474 to 1,919,157 _1820 B158DRAFT_1821: B158DRAFT_1821 - DNA segregation ATPase FtsK/SpoIIIE and related proteins, at 1,919,708 to 1,922,047 _1821 B158DRAFT_1822: B158DRAFT_1822 - Transcriptional regulators, at 1,922,140 to 1,922,637 _1822 B158DRAFT_1823: B158DRAFT_1823 - alanine dehydrogenase, at 1,922,779 to 1,923,912 _1823 Position (kb) 1919 1920 1921 1922 1923Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1919.189 kb on + strandat 1919.189 kb on + strandat 1919.189 kb on + strandat 1919.189 kb on + strandat 1919.197 kb on - strandat 1919.197 kb on - strandat 1919.207 kb on - strandat 1919.237 kb on + strandat 1919.263 kb on + strandat 1919.263 kb on + strandat 1919.271 kb on - strandat 1919.271 kb on - strandat 1919.403 kb on + strandat 1919.419 kb on + strandat 1919.440 kb on + strandat 1919.448 kb on - strandat 1919.474 kb on + strandat 1919.482 kb on - strandat 1919.646 kb on + strandat 1919.719 kb on - strandat 1919.738 kb on - strandat 1919.738 kb on - strandat 1919.748 kb on + strandat 1919.752 kb on - strandat 1919.754 kb on - strandat 1919.795 kb on + strandat 1919.813 kb on + strandat 1919.859 kb on + strandat 1919.867 kb on - strandat 1919.915 kb on + strandat 1919.923 kb on - strandat 1919.923 kb on - strandat 1919.953 kb on - strand, within B158DRAFT_1821at 1919.980 kb on - strand, within B158DRAFT_1821at 1920.077 kb on - strand, within B158DRAFT_1821at 1920.080 kb on + strand, within B158DRAFT_1821at 1920.083 kb on - strand, within B158DRAFT_1821at 1920.096 kb on + strand, within B158DRAFT_1821at 1920.098 kb on + strand, within B158DRAFT_1821at 1920.106 kb on - strand, within B158DRAFT_1821at 1920.106 kb on - strand, within B158DRAFT_1821at 1920.135 kb on - strand, within B158DRAFT_1821at 1920.142 kb on + strand, within B158DRAFT_1821at 1920.153 kb on + strand, within B158DRAFT_1821at 1920.212 kb on + strand, within B158DRAFT_1821at 1920.220 kb on - strand, within B158DRAFT_1821at 1920.360 kb on - strand, within B158DRAFT_1821at 1920.390 kb on + strand, within B158DRAFT_1821at 1920.549 kb on + strand, within B158DRAFT_1821at 1920.549 kb on + strand, within B158DRAFT_1821at 1920.549 kb on + strand, within B158DRAFT_1821at 1920.557 kb on - strand, within B158DRAFT_1821at 1920.562 kb on - strand, within B158DRAFT_1821at 1920.592 kb on - strand, within B158DRAFT_1821at 1920.625 kb on - strand, within B158DRAFT_1821at 1920.640 kb on + strand, within B158DRAFT_1821at 1920.689 kb on - strand, within B158DRAFT_1821at 1920.717 kb on + strand, within B158DRAFT_1821at 1920.738 kb on + strand, within B158DRAFT_1821at 1920.740 kb on + strand, within B158DRAFT_1821at 1920.803 kb on + strand, within B158DRAFT_1821at 1920.827 kb on - strand, within B158DRAFT_1821at 1920.839 kb on - strand, within B158DRAFT_1821at 1920.857 kb on + strand, within B158DRAFT_1821at 1920.857 kb on + strand, within B158DRAFT_1821at 1920.857 kb on + strand, within B158DRAFT_1821at 1920.857 kb on + strand, within B158DRAFT_1821at 1920.865 kb on - strand, within B158DRAFT_1821at 1920.865 kb on - strand, within B158DRAFT_1821at 1920.865 kb on - strand, within B158DRAFT_1821at 1920.865 kb on - strand, within B158DRAFT_1821at 1920.865 kb on - strand, within B158DRAFT_1821at 1920.865 kb on - strand, within B158DRAFT_1821at 1920.935 kb on + strand, within B158DRAFT_1821at 1921.073 kb on + strand, within B158DRAFT_1821at 1921.076 kb on - strand, within B158DRAFT_1821at 1921.076 kb on - strand, within B158DRAFT_1821at 1921.117 kb on + strand, within B158DRAFT_1821at 1921.173 kb on - strand, within B158DRAFT_1821at 1921.251 kb on + strand, within B158DRAFT_1821at 1921.259 kb on - strand, within B158DRAFT_1821at 1921.259 kb on - strand, within B158DRAFT_1821at 1921.263 kb on + strand, within B158DRAFT_1821at 1921.263 kb on + strand, within B158DRAFT_1821at 1921.263 kb on + strand, within B158DRAFT_1821at 1921.271 kb on - strand, within B158DRAFT_1821at 1921.271 kb on - strand, within B158DRAFT_1821at 1921.271 kb on - strand, within B158DRAFT_1821at 1921.279 kb on + strand, within B158DRAFT_1821at 1921.293 kb on - strand, within B158DRAFT_1821at 1921.298 kb on - strand, within B158DRAFT_1821at 1921.322 kb on - strand, within B158DRAFT_1821at 1921.333 kb on - strand, within B158DRAFT_1821at 1921.340 kb on + strand, within B158DRAFT_1821at 1921.348 kb on - strand, within B158DRAFT_1821at 1921.391 kb on - strand, within B158DRAFT_1821at 1921.391 kb on - strand, within B158DRAFT_1821at 1921.425 kb on + strand, within B158DRAFT_1821at 1921.543 kb on + strand, within B158DRAFT_1821at 1921.551 kb on - strand, within B158DRAFT_1821at 1921.551 kb on - strand, within B158DRAFT_1821at 1921.551 kb on - strand, within B158DRAFT_1821at 1921.551 kb on - strand, within B158DRAFT_1821at 1921.615 kb on - strand, within B158DRAFT_1821at 1921.635 kb on + strand, within B158DRAFT_1821at 1921.640 kb on + strand, within B158DRAFT_1821at 1921.643 kb on - strand, within B158DRAFT_1821at 1921.643 kb on - strand, within B158DRAFT_1821at 1921.646 kb on - strand, within B158DRAFT_1821at 1921.646 kb on - strand, within B158DRAFT_1821at 1921.648 kb on - strand, within B158DRAFT_1821at 1921.648 kb on - strand, within B158DRAFT_1821at 1921.653 kb on - strand, within B158DRAFT_1821at 1921.653 kb on - strand, within B158DRAFT_1821at 1921.653 kb on - strand, within B158DRAFT_1821at 1921.661 kb on - strand, within B158DRAFT_1821at 1921.666 kb on - strand, within B158DRAFT_1821at 1921.700 kb on - strand, within B158DRAFT_1821at 1921.978 kb on + strandat 1921.978 kb on + strandat 1921.986 kb on - strandat 1921.986 kb on - strandat 1921.986 kb on - strandat 1921.991 kb on - strandat 1921.991 kb on - strandat 1921.991 kb on - strandat 1921.991 kb on - strandat 1922.096 kb on + strandat 1922.096 kb on + strandat 1922.096 kb on + strandat 1922.104 kb on - strandat 1922.120 kb on + strandat 1922.177 kb on + strandat 1922.213 kb on + strand, within B158DRAFT_1822at 1922.221 kb on - strand, within B158DRAFT_1822at 1922.221 kb on - strand, within B158DRAFT_1822at 1922.334 kb on - strand, within B158DRAFT_1822at 1922.419 kb on + strand, within B158DRAFT_1822at 1922.427 kb on - strand, within B158DRAFT_1822at 1922.451 kb on + strand, within B158DRAFT_1822at 1922.451 kb on + strand, within B158DRAFT_1822at 1922.456 kb on + strand, within B158DRAFT_1822at 1922.459 kb on - strand, within B158DRAFT_1822at 1922.489 kb on + strand, within B158DRAFT_1822at 1922.497 kb on - strand, within B158DRAFT_1822at 1922.499 kb on + strand, within B158DRAFT_1822at 1922.499 kb on + strand, within B158DRAFT_1822at 1922.499 kb on + strand, within B158DRAFT_1822at 1922.499 kb on + strand, within B158DRAFT_1822at 1922.499 kb on + strand, within B158DRAFT_1822at 1922.499 kb on + strand, within B158DRAFT_1822at 1922.499 kb on + strand, within B158DRAFT_1822at 1922.499 kb on + strand, within B158DRAFT_1822at 1922.499 kb on + strand, within B158DRAFT_1822at 1922.499 kb on + strand, within B158DRAFT_1822at 1922.499 kb on + strand, within B158DRAFT_1822at 1922.499 kb on + strand, within B158DRAFT_1822at 1922.499 kb on + strand, within B158DRAFT_1822at 1922.507 kb on - strand, within B158DRAFT_1822at 1922.507 kb on - strand, within B158DRAFT_1822at 1922.507 kb on - strand, within B158DRAFT_1822at 1922.507 kb on - strand, within B158DRAFT_1822at 1922.507 kb on - strand, within B158DRAFT_1822at 1922.507 kb on - strand, within B158DRAFT_1822at 1922.507 kb on - strand, within B158DRAFT_1822at 1922.507 kb on - strand, within B158DRAFT_1822at 1922.507 kb on - strand, within B158DRAFT_1822at 1922.507 kb on - strand, within B158DRAFT_1822at 1922.507 kb on - strand, within B158DRAFT_1822at 1922.511 kb on + strand, within B158DRAFT_1822at 1922.511 kb on + strand, within B158DRAFT_1822at 1922.512 kb on - strand, within B158DRAFT_1822at 1922.519 kb on - strand, within B158DRAFT_1822at 1922.587 kb on + strand, within B158DRAFT_1822at 1922.592 kb on + strandat 1922.592 kb on + strandat 1922.592 kb on + strandat 1922.600 kb on - strandat 1922.600 kb on - strandat 1922.600 kb on - strandat 1922.600 kb on - strandat 1922.600 kb on - strandat 1922.600 kb on - strandat 1922.792 kb on - strandat 1922.837 kb on + strandat 1922.860 kb on + strandat 1923.029 kb on - strand, within B158DRAFT_1823at 1923.040 kb on + strand, within B158DRAFT_1823at 1923.040 kb on + strand, within B158DRAFT_1823

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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1,919,189 + +0.4
1,919,189 + -1.1
1,919,189 + +0.4
1,919,189 + -0.9
1,919,197 - +0.9
1,919,197 - -0.6
1,919,207 - +0.3
1,919,237 + -1.6
1,919,263 + -2.5
1,919,263 + -2.9
1,919,271 - -0.2
1,919,271 - -0.2
1,919,403 + -1.2
1,919,419 + -2.5
1,919,440 + -1.3
1,919,448 - -0.6
1,919,474 + -2.2
1,919,482 - -0.3
1,919,646 + -1.2
1,919,719 - -3.0
1,919,738 - -1.9
1,919,738 - -1.7
1,919,748 + -1.1
1,919,752 - -1.0
1,919,754 - -1.1
1,919,795 + -2.1
1,919,813 + -1.0
1,919,859 + -1.8
1,919,867 - -2.6
1,919,915 + -1.8
1,919,923 - -1.4
1,919,923 - -0.4
1,919,953 - B158DRAFT_1821 0.10 -1.6
1,919,980 - B158DRAFT_1821 0.12 -1.2
1,920,077 - B158DRAFT_1821 0.16 -2.0
1,920,080 + B158DRAFT_1821 0.16 -2.3
1,920,083 - B158DRAFT_1821 0.16 -2.8
1,920,096 + B158DRAFT_1821 0.17 -1.5
1,920,098 + B158DRAFT_1821 0.17 -3.0
1,920,106 - B158DRAFT_1821 0.17 -1.6
1,920,106 - B158DRAFT_1821 0.17 -2.0
1,920,135 - B158DRAFT_1821 0.18 -0.6
1,920,142 + B158DRAFT_1821 0.19 -2.6
1,920,153 + B158DRAFT_1821 0.19 -3.5
1,920,212 + B158DRAFT_1821 0.22 -3.6
1,920,220 - B158DRAFT_1821 0.22 -0.8
1,920,360 - B158DRAFT_1821 0.28 -1.3
1,920,390 + B158DRAFT_1821 0.29 -2.8
1,920,549 + B158DRAFT_1821 0.36 -1.0
1,920,549 + B158DRAFT_1821 0.36 -2.3
1,920,549 + B158DRAFT_1821 0.36 -2.2
1,920,557 - B158DRAFT_1821 0.36 -2.1
1,920,562 - B158DRAFT_1821 0.36 -1.0
1,920,592 - B158DRAFT_1821 0.38 +0.3
1,920,625 - B158DRAFT_1821 0.39 -2.2
1,920,640 + B158DRAFT_1821 0.40 -1.6
1,920,689 - B158DRAFT_1821 0.42 -2.0
1,920,717 + B158DRAFT_1821 0.43 -2.4
1,920,738 + B158DRAFT_1821 0.44 -2.1
1,920,740 + B158DRAFT_1821 0.44 -2.3
1,920,803 + B158DRAFT_1821 0.47 -1.9
1,920,827 - B158DRAFT_1821 0.48 -1.4
1,920,839 - B158DRAFT_1821 0.48 -1.7
1,920,857 + B158DRAFT_1821 0.49 -2.7
1,920,857 + B158DRAFT_1821 0.49 -3.8
1,920,857 + B158DRAFT_1821 0.49 -1.5
1,920,857 + B158DRAFT_1821 0.49 -2.0
1,920,865 - B158DRAFT_1821 0.49 -3.0
1,920,865 - B158DRAFT_1821 0.49 -0.9
1,920,865 - B158DRAFT_1821 0.49 -0.4
1,920,865 - B158DRAFT_1821 0.49 -2.9
1,920,865 - B158DRAFT_1821 0.49 -4.3
1,920,865 - B158DRAFT_1821 0.49 -0.4
1,920,935 + B158DRAFT_1821 0.52 -2.7
1,921,073 + B158DRAFT_1821 0.58 -3.9
1,921,076 - B158DRAFT_1821 0.58 -0.1
1,921,076 - B158DRAFT_1821 0.58 -0.9
1,921,117 + B158DRAFT_1821 0.60 -3.4
1,921,173 - B158DRAFT_1821 0.63 -2.3
1,921,251 + B158DRAFT_1821 0.66 -3.0
1,921,259 - B158DRAFT_1821 0.66 -1.0
1,921,259 - B158DRAFT_1821 0.66 -1.5
1,921,263 + B158DRAFT_1821 0.66 -4.0
1,921,263 + B158DRAFT_1821 0.66 -0.7
1,921,263 + B158DRAFT_1821 0.66 -1.4
1,921,271 - B158DRAFT_1821 0.67 -0.8
1,921,271 - B158DRAFT_1821 0.67 -0.8
1,921,271 - B158DRAFT_1821 0.67 -1.4
1,921,279 + B158DRAFT_1821 0.67 -2.7
1,921,293 - B158DRAFT_1821 0.68 -1.6
1,921,298 - B158DRAFT_1821 0.68 -2.1
1,921,322 - B158DRAFT_1821 0.69 -0.6
1,921,333 - B158DRAFT_1821 0.69 -1.9
1,921,340 + B158DRAFT_1821 0.70 -1.6
1,921,348 - B158DRAFT_1821 0.70 +0.2
1,921,391 - B158DRAFT_1821 0.72 -3.4
1,921,391 - B158DRAFT_1821 0.72 -2.8
1,921,425 + B158DRAFT_1821 0.73 -2.6
1,921,543 + B158DRAFT_1821 0.78 -1.6
1,921,551 - B158DRAFT_1821 0.79 +0.6
1,921,551 - B158DRAFT_1821 0.79 -1.0
1,921,551 - B158DRAFT_1821 0.79 -0.6
1,921,551 - B158DRAFT_1821 0.79 -1.3
1,921,615 - B158DRAFT_1821 0.81 -0.4
1,921,635 + B158DRAFT_1821 0.82 -0.8
1,921,640 + B158DRAFT_1821 0.83 +0.0
1,921,643 - B158DRAFT_1821 0.83 -1.4
1,921,643 - B158DRAFT_1821 0.83 -1.6
1,921,646 - B158DRAFT_1821 0.83 -2.6
1,921,646 - B158DRAFT_1821 0.83 -1.3
1,921,648 - B158DRAFT_1821 0.83 +0.6
1,921,648 - B158DRAFT_1821 0.83 +0.6
1,921,653 - B158DRAFT_1821 0.83 -2.4
1,921,653 - B158DRAFT_1821 0.83 -1.9
1,921,653 - B158DRAFT_1821 0.83 -1.5
1,921,661 - B158DRAFT_1821 0.83 -1.7
1,921,666 - B158DRAFT_1821 0.84 -1.7
1,921,700 - B158DRAFT_1821 0.85 -1.3
1,921,978 + -2.1
1,921,978 + -2.4
1,921,986 - -2.4
1,921,986 - -1.9
1,921,986 - -3.0
1,921,991 - -1.1
1,921,991 - -1.7
1,921,991 - -1.1
1,921,991 - -1.7
1,922,096 + -0.4
1,922,096 + -0.7
1,922,096 + -0.3
1,922,104 - -0.0
1,922,120 + +0.4
1,922,177 + -0.5
1,922,213 + B158DRAFT_1822 0.15 -0.6
1,922,221 - B158DRAFT_1822 0.16 -0.5
1,922,221 - B158DRAFT_1822 0.16 -1.7
1,922,334 - B158DRAFT_1822 0.39 +0.3
1,922,419 + B158DRAFT_1822 0.56 -1.0
1,922,427 - B158DRAFT_1822 0.58 -0.8
1,922,451 + B158DRAFT_1822 0.62 -0.5
1,922,451 + B158DRAFT_1822 0.62 -0.7
1,922,456 + B158DRAFT_1822 0.63 -0.2
1,922,459 - B158DRAFT_1822 0.64 -0.4
1,922,489 + B158DRAFT_1822 0.70 -0.3
1,922,497 - B158DRAFT_1822 0.72 -0.6
1,922,499 + B158DRAFT_1822 0.72 -0.8
1,922,499 + B158DRAFT_1822 0.72 -0.8
1,922,499 + B158DRAFT_1822 0.72 -0.2
1,922,499 + B158DRAFT_1822 0.72 -0.1
1,922,499 + B158DRAFT_1822 0.72 -0.6
1,922,499 + B158DRAFT_1822 0.72 -1.4
1,922,499 + B158DRAFT_1822 0.72 -0.1
1,922,499 + B158DRAFT_1822 0.72 -1.3
1,922,499 + B158DRAFT_1822 0.72 -0.8
1,922,499 + B158DRAFT_1822 0.72 -1.2
1,922,499 + B158DRAFT_1822 0.72 -0.6
1,922,499 + B158DRAFT_1822 0.72 +0.1
1,922,499 + B158DRAFT_1822 0.72 -0.4
1,922,507 - B158DRAFT_1822 0.74 -0.5
1,922,507 - B158DRAFT_1822 0.74 -0.6
1,922,507 - B158DRAFT_1822 0.74 -0.3
1,922,507 - B158DRAFT_1822 0.74 -0.8
1,922,507 - B158DRAFT_1822 0.74 -0.9
1,922,507 - B158DRAFT_1822 0.74 -1.1
1,922,507 - B158DRAFT_1822 0.74 -0.5
1,922,507 - B158DRAFT_1822 0.74 -0.8
1,922,507 - B158DRAFT_1822 0.74 -0.3
1,922,507 - B158DRAFT_1822 0.74 -0.2
1,922,507 - B158DRAFT_1822 0.74 -1.1
1,922,511 + B158DRAFT_1822 0.74 -0.7
1,922,511 + B158DRAFT_1822 0.74 -0.5
1,922,512 - B158DRAFT_1822 0.75 -0.4
1,922,519 - B158DRAFT_1822 0.76 -0.3
1,922,587 + B158DRAFT_1822 0.90 +0.0
1,922,592 + -1.1
1,922,592 + -0.5
1,922,592 + -0.9
1,922,600 - -1.2
1,922,600 - -0.4
1,922,600 - -0.9
1,922,600 - -0.2
1,922,600 - +0.0
1,922,600 - -0.7
1,922,792 - +0.6
1,922,837 + -0.5
1,922,860 + -0.6
1,923,029 - B158DRAFT_1823 0.22 -0.7
1,923,040 + B158DRAFT_1823 0.23 -0.3
1,923,040 + B158DRAFT_1823 0.23 -1.8

Or see this region's nucleotide sequence