Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1793

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1792 and B158DRAFT_1793 are separated by 45 nucleotidesB158DRAFT_1793 and B158DRAFT_1794 are separated by 71 nucleotidesB158DRAFT_1794 and B158DRAFT_1795 are separated by 100 nucleotides B158DRAFT_1792: B158DRAFT_1792 - L-asparaginases, type I, at 1,885,868 to 1,886,887 _1792 B158DRAFT_1793: B158DRAFT_1793 - Alanine dehydrogenase, at 1,886,933 to 1,888,189 _1793 B158DRAFT_1794: B158DRAFT_1794 - Uncharacterized protein conserved in bacteria, at 1,888,261 to 1,888,593 _1794 B158DRAFT_1795: B158DRAFT_1795 - Ion transport protein., at 1,888,694 to 1,889,593 _1795 Position (kb) 1886 1887 1888 1889Strain fitness (log2 ratio) -1 0 1 2 3at 1886.058 kb on + strand, within B158DRAFT_1792at 1886.067 kb on - strand, within B158DRAFT_1792at 1886.118 kb on + strand, within B158DRAFT_1792at 1886.118 kb on + strand, within B158DRAFT_1792at 1886.126 kb on - strand, within B158DRAFT_1792at 1886.157 kb on - strand, within B158DRAFT_1792at 1886.263 kb on + strand, within B158DRAFT_1792at 1886.271 kb on - strand, within B158DRAFT_1792at 1886.271 kb on - strand, within B158DRAFT_1792at 1886.271 kb on - strand, within B158DRAFT_1792at 1886.287 kb on + strand, within B158DRAFT_1792at 1886.363 kb on + strand, within B158DRAFT_1792at 1886.410 kb on - strand, within B158DRAFT_1792at 1886.416 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.424 kb on + strand, within B158DRAFT_1792at 1886.432 kb on - strand, within B158DRAFT_1792at 1886.432 kb on - strand, within B158DRAFT_1792at 1886.432 kb on - strand, within B158DRAFT_1792at 1886.432 kb on - strand, within B158DRAFT_1792at 1886.432 kb on - strand, within B158DRAFT_1792at 1886.432 kb on - strand, within B158DRAFT_1792at 1886.458 kb on + strand, within B158DRAFT_1792at 1886.577 kb on - strand, within B158DRAFT_1792at 1886.587 kb on - strand, within B158DRAFT_1792at 1886.587 kb on - strand, within B158DRAFT_1792at 1886.816 kb on + strandat 1886.969 kb on + strandat 1886.977 kb on - strandat 1886.977 kb on - strandat 1887.005 kb on + strandat 1887.019 kb on - strandat 1887.064 kb on - strand, within B158DRAFT_1793at 1887.082 kb on - strand, within B158DRAFT_1793at 1887.107 kb on + strand, within B158DRAFT_1793at 1887.112 kb on + strand, within B158DRAFT_1793at 1887.151 kb on + strand, within B158DRAFT_1793at 1887.172 kb on - strand, within B158DRAFT_1793at 1887.215 kb on + strand, within B158DRAFT_1793at 1887.228 kb on + strand, within B158DRAFT_1793at 1887.237 kb on - strand, within B158DRAFT_1793at 1887.249 kb on - strand, within B158DRAFT_1793at 1887.336 kb on + strand, within B158DRAFT_1793at 1887.344 kb on - strand, within B158DRAFT_1793at 1887.372 kb on + strand, within B158DRAFT_1793at 1887.372 kb on + strand, within B158DRAFT_1793at 1887.391 kb on - strand, within B158DRAFT_1793at 1887.391 kb on - strand, within B158DRAFT_1793at 1887.415 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.488 kb on + strand, within B158DRAFT_1793at 1887.496 kb on - strand, within B158DRAFT_1793at 1887.496 kb on - strand, within B158DRAFT_1793at 1887.496 kb on - strand, within B158DRAFT_1793at 1887.496 kb on - strand, within B158DRAFT_1793at 1887.496 kb on - strand, within B158DRAFT_1793at 1887.496 kb on - strand, within B158DRAFT_1793at 1887.496 kb on - strand, within B158DRAFT_1793at 1887.498 kb on + strand, within B158DRAFT_1793at 1887.504 kb on - strand, within B158DRAFT_1793at 1887.518 kb on - strand, within B158DRAFT_1793at 1887.543 kb on + strand, within B158DRAFT_1793at 1887.543 kb on + strand, within B158DRAFT_1793at 1887.543 kb on + strand, within B158DRAFT_1793at 1887.560 kb on + strand, within B158DRAFT_1793at 1887.577 kb on + strand, within B158DRAFT_1793at 1887.577 kb on + strand, within B158DRAFT_1793at 1887.585 kb on - strand, within B158DRAFT_1793at 1887.585 kb on - strand, within B158DRAFT_1793at 1887.636 kb on + strand, within B158DRAFT_1793at 1887.654 kb on - strand, within B158DRAFT_1793at 1887.692 kb on - strand, within B158DRAFT_1793at 1887.700 kb on - strand, within B158DRAFT_1793at 1887.725 kb on + strand, within B158DRAFT_1793at 1887.733 kb on - strand, within B158DRAFT_1793at 1887.895 kb on + strand, within B158DRAFT_1793at 1887.899 kb on + strand, within B158DRAFT_1793at 1887.899 kb on + strand, within B158DRAFT_1793at 1887.905 kb on + strand, within B158DRAFT_1793at 1887.905 kb on + strand, within B158DRAFT_1793at 1887.905 kb on + strand, within B158DRAFT_1793at 1887.905 kb on + strand, within B158DRAFT_1793at 1887.905 kb on + strand, within B158DRAFT_1793at 1887.905 kb on + strand, within B158DRAFT_1793at 1887.913 kb on - strand, within B158DRAFT_1793at 1887.913 kb on - strand, within B158DRAFT_1793at 1887.940 kb on - strand, within B158DRAFT_1793at 1888.008 kb on + strand, within B158DRAFT_1793at 1888.016 kb on - strand, within B158DRAFT_1793at 1888.025 kb on - strand, within B158DRAFT_1793at 1888.096 kb on - strandat 1888.120 kb on + strandat 1888.248 kb on + strandat 1888.248 kb on + strandat 1888.248 kb on + strandat 1888.248 kb on + strandat 1888.249 kb on - strandat 1888.253 kb on + strandat 1888.256 kb on - strandat 1888.256 kb on - strandat 1888.257 kb on - strandat 1888.266 kb on + strandat 1888.320 kb on - strand, within B158DRAFT_1794at 1888.353 kb on - strand, within B158DRAFT_1794at 1888.427 kb on + strand, within B158DRAFT_1794at 1888.435 kb on - strand, within B158DRAFT_1794at 1888.450 kb on - strand, within B158DRAFT_1794at 1888.506 kb on - strand, within B158DRAFT_1794at 1888.538 kb on + strand, within B158DRAFT_1794at 1888.548 kb on + strand, within B158DRAFT_1794at 1888.548 kb on + strand, within B158DRAFT_1794at 1888.556 kb on - strand, within B158DRAFT_1794at 1888.556 kb on - strand, within B158DRAFT_1794at 1888.556 kb on - strand, within B158DRAFT_1794at 1888.556 kb on - strand, within B158DRAFT_1794at 1888.694 kb on - strandat 1888.745 kb on + strandat 1888.802 kb on + strand, within B158DRAFT_1795at 1888.824 kb on + strand, within B158DRAFT_1795at 1888.832 kb on - strand, within B158DRAFT_1795at 1888.918 kb on - strand, within B158DRAFT_1795at 1888.939 kb on + strand, within B158DRAFT_1795at 1888.939 kb on + strand, within B158DRAFT_1795at 1888.939 kb on + strand, within B158DRAFT_1795at 1888.939 kb on + strand, within B158DRAFT_1795at 1888.949 kb on + strand, within B158DRAFT_1795at 1888.952 kb on - strand, within B158DRAFT_1795at 1888.959 kb on - strand, within B158DRAFT_1795at 1888.959 kb on - strand, within B158DRAFT_1795at 1888.966 kb on - strand, within B158DRAFT_1795at 1888.970 kb on + strand, within B158DRAFT_1795at 1888.973 kb on - strand, within B158DRAFT_1795at 1888.983 kb on - strand, within B158DRAFT_1795at 1888.989 kb on - strand, within B158DRAFT_1795at 1889.039 kb on - strand, within B158DRAFT_1795at 1889.055 kb on + strand, within B158DRAFT_1795at 1889.057 kb on - strand, within B158DRAFT_1795at 1889.057 kb on - strand, within B158DRAFT_1795at 1889.100 kb on - strand, within B158DRAFT_1795at 1889.125 kb on + strand, within B158DRAFT_1795at 1889.132 kb on + strand, within B158DRAFT_1795at 1889.133 kb on - strand, within B158DRAFT_1795at 1889.137 kb on + strand, within B158DRAFT_1795at 1889.137 kb on + strand, within B158DRAFT_1795at 1889.137 kb on + strand, within B158DRAFT_1795at 1889.137 kb on + strand, within B158DRAFT_1795at 1889.137 kb on + strand, within B158DRAFT_1795at 1889.140 kb on - strand, within B158DRAFT_1795at 1889.145 kb on - strand, within B158DRAFT_1795at 1889.145 kb on - strand, within B158DRAFT_1795

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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1,886,058 + B158DRAFT_1792 0.19 -0.6
1,886,067 - B158DRAFT_1792 0.20 -0.2
1,886,118 + B158DRAFT_1792 0.25 -0.1
1,886,118 + B158DRAFT_1792 0.25 +0.0
1,886,126 - B158DRAFT_1792 0.25 -0.3
1,886,157 - B158DRAFT_1792 0.28 -0.4
1,886,263 + B158DRAFT_1792 0.39 -0.1
1,886,271 - B158DRAFT_1792 0.40 +0.2
1,886,271 - B158DRAFT_1792 0.40 -0.6
1,886,271 - B158DRAFT_1792 0.40 +0.8
1,886,287 + B158DRAFT_1792 0.41 -0.1
1,886,363 + B158DRAFT_1792 0.49 -0.9
1,886,410 - B158DRAFT_1792 0.53 -0.2
1,886,416 + B158DRAFT_1792 0.54 -0.2
1,886,424 + B158DRAFT_1792 0.55 +0.8
1,886,424 + B158DRAFT_1792 0.55 +0.1
1,886,424 + B158DRAFT_1792 0.55 +0.0
1,886,424 + B158DRAFT_1792 0.55 +0.2
1,886,424 + B158DRAFT_1792 0.55 -0.3
1,886,424 + B158DRAFT_1792 0.55 -0.3
1,886,424 + B158DRAFT_1792 0.55 +0.4
1,886,424 + B158DRAFT_1792 0.55 +0.8
1,886,432 - B158DRAFT_1792 0.55 -0.2
1,886,432 - B158DRAFT_1792 0.55 -0.3
1,886,432 - B158DRAFT_1792 0.55 -0.4
1,886,432 - B158DRAFT_1792 0.55 -0.2
1,886,432 - B158DRAFT_1792 0.55 -0.3
1,886,432 - B158DRAFT_1792 0.55 +0.6
1,886,458 + B158DRAFT_1792 0.58 -0.2
1,886,577 - B158DRAFT_1792 0.70 +0.1
1,886,587 - B158DRAFT_1792 0.70 +0.1
1,886,587 - B158DRAFT_1792 0.70 -0.0
1,886,816 + -0.2
1,886,969 + +0.6
1,886,977 - +0.2
1,886,977 - +0.5
1,887,005 + -0.3
1,887,019 - -0.7
1,887,064 - B158DRAFT_1793 0.10 +0.1
1,887,082 - B158DRAFT_1793 0.12 +0.2
1,887,107 + B158DRAFT_1793 0.14 -0.3
1,887,112 + B158DRAFT_1793 0.14 +0.1
1,887,151 + B158DRAFT_1793 0.17 -0.0
1,887,172 - B158DRAFT_1793 0.19 +0.4
1,887,215 + B158DRAFT_1793 0.22 +0.3
1,887,228 + B158DRAFT_1793 0.23 -0.0
1,887,237 - B158DRAFT_1793 0.24 +0.1
1,887,249 - B158DRAFT_1793 0.25 -0.4
1,887,336 + B158DRAFT_1793 0.32 -0.7
1,887,344 - B158DRAFT_1793 0.33 -0.1
1,887,372 + B158DRAFT_1793 0.35 +0.2
1,887,372 + B158DRAFT_1793 0.35 -0.5
1,887,391 - B158DRAFT_1793 0.36 -0.3
1,887,391 - B158DRAFT_1793 0.36 -0.1
1,887,415 + B158DRAFT_1793 0.38 -0.4
1,887,488 + B158DRAFT_1793 0.44 -0.8
1,887,488 + B158DRAFT_1793 0.44 +0.0
1,887,488 + B158DRAFT_1793 0.44 -0.2
1,887,488 + B158DRAFT_1793 0.44 -0.4
1,887,488 + B158DRAFT_1793 0.44 -0.4
1,887,488 + B158DRAFT_1793 0.44 -1.2
1,887,488 + B158DRAFT_1793 0.44 -0.9
1,887,488 + B158DRAFT_1793 0.44 -0.1
1,887,488 + B158DRAFT_1793 0.44 -0.3
1,887,488 + B158DRAFT_1793 0.44 +0.1
1,887,496 - B158DRAFT_1793 0.45 +0.7
1,887,496 - B158DRAFT_1793 0.45 -0.9
1,887,496 - B158DRAFT_1793 0.45 +0.5
1,887,496 - B158DRAFT_1793 0.45 +0.5
1,887,496 - B158DRAFT_1793 0.45 -0.7
1,887,496 - B158DRAFT_1793 0.45 +0.8
1,887,496 - B158DRAFT_1793 0.45 +0.1
1,887,498 + B158DRAFT_1793 0.45 -0.4
1,887,504 - B158DRAFT_1793 0.45 -0.0
1,887,518 - B158DRAFT_1793 0.47 -0.6
1,887,543 + B158DRAFT_1793 0.49 -0.1
1,887,543 + B158DRAFT_1793 0.49 +0.8
1,887,543 + B158DRAFT_1793 0.49 +0.3
1,887,560 + B158DRAFT_1793 0.50 -0.2
1,887,577 + B158DRAFT_1793 0.51 -0.6
1,887,577 + B158DRAFT_1793 0.51 +0.0
1,887,585 - B158DRAFT_1793 0.52 -0.2
1,887,585 - B158DRAFT_1793 0.52 +0.2
1,887,636 + B158DRAFT_1793 0.56 +0.4
1,887,654 - B158DRAFT_1793 0.57 -0.2
1,887,692 - B158DRAFT_1793 0.60 -0.1
1,887,700 - B158DRAFT_1793 0.61 -0.3
1,887,725 + B158DRAFT_1793 0.63 -0.2
1,887,733 - B158DRAFT_1793 0.64 -0.1
1,887,895 + B158DRAFT_1793 0.77 +2.2
1,887,899 + B158DRAFT_1793 0.77 -0.1
1,887,899 + B158DRAFT_1793 0.77 +0.0
1,887,905 + B158DRAFT_1793 0.77 +0.1
1,887,905 + B158DRAFT_1793 0.77 -0.1
1,887,905 + B158DRAFT_1793 0.77 +0.1
1,887,905 + B158DRAFT_1793 0.77 +0.3
1,887,905 + B158DRAFT_1793 0.77 -0.1
1,887,905 + B158DRAFT_1793 0.77 -0.3
1,887,913 - B158DRAFT_1793 0.78 -0.1
1,887,913 - B158DRAFT_1793 0.78 -0.1
1,887,940 - B158DRAFT_1793 0.80 +2.8
1,888,008 + B158DRAFT_1793 0.86 -0.1
1,888,016 - B158DRAFT_1793 0.86 +0.0
1,888,025 - B158DRAFT_1793 0.87 -0.9
1,888,096 - -0.2
1,888,120 + -0.0
1,888,248 + -1.5
1,888,248 + +0.2
1,888,248 + +0.4
1,888,248 + -0.1
1,888,249 - +0.2
1,888,253 + -0.1
1,888,256 - -0.4
1,888,256 - +0.1
1,888,257 - -0.1
1,888,266 + -0.0
1,888,320 - B158DRAFT_1794 0.18 +0.8
1,888,353 - B158DRAFT_1794 0.28 +0.2
1,888,427 + B158DRAFT_1794 0.50 +0.9
1,888,435 - B158DRAFT_1794 0.52 +1.3
1,888,450 - B158DRAFT_1794 0.57 +1.3
1,888,506 - B158DRAFT_1794 0.74 +0.9
1,888,538 + B158DRAFT_1794 0.83 +1.5
1,888,548 + B158DRAFT_1794 0.86 +1.3
1,888,548 + B158DRAFT_1794 0.86 +1.4
1,888,556 - B158DRAFT_1794 0.89 +0.9
1,888,556 - B158DRAFT_1794 0.89 +1.2
1,888,556 - B158DRAFT_1794 0.89 +1.4
1,888,556 - B158DRAFT_1794 0.89 +1.5
1,888,694 - -1.1
1,888,745 + -0.2
1,888,802 + B158DRAFT_1795 0.12 +0.1
1,888,824 + B158DRAFT_1795 0.14 +0.5
1,888,832 - B158DRAFT_1795 0.15 -0.1
1,888,918 - B158DRAFT_1795 0.25 -0.4
1,888,939 + B158DRAFT_1795 0.27 +0.1
1,888,939 + B158DRAFT_1795 0.27 +0.0
1,888,939 + B158DRAFT_1795 0.27 -0.7
1,888,939 + B158DRAFT_1795 0.27 +0.1
1,888,949 + B158DRAFT_1795 0.28 -1.4
1,888,952 - B158DRAFT_1795 0.29 +0.0
1,888,959 - B158DRAFT_1795 0.29 -1.0
1,888,959 - B158DRAFT_1795 0.29 -0.7
1,888,966 - B158DRAFT_1795 0.30 -0.6
1,888,970 + B158DRAFT_1795 0.31 +1.9
1,888,973 - B158DRAFT_1795 0.31 +0.3
1,888,983 - B158DRAFT_1795 0.32 +0.0
1,888,989 - B158DRAFT_1795 0.33 +0.5
1,889,039 - B158DRAFT_1795 0.38 -0.2
1,889,055 + B158DRAFT_1795 0.40 -0.0
1,889,057 - B158DRAFT_1795 0.40 -0.3
1,889,057 - B158DRAFT_1795 0.40 -0.6
1,889,100 - B158DRAFT_1795 0.45 -0.7
1,889,125 + B158DRAFT_1795 0.48 -0.2
1,889,132 + B158DRAFT_1795 0.49 -0.1
1,889,133 - B158DRAFT_1795 0.49 -0.1
1,889,137 + B158DRAFT_1795 0.49 -0.2
1,889,137 + B158DRAFT_1795 0.49 +0.1
1,889,137 + B158DRAFT_1795 0.49 -0.9
1,889,137 + B158DRAFT_1795 0.49 -0.2
1,889,137 + B158DRAFT_1795 0.49 -1.3
1,889,140 - B158DRAFT_1795 0.50 +0.1
1,889,145 - B158DRAFT_1795 0.50 -0.4
1,889,145 - B158DRAFT_1795 0.50 -0.5

Or see this region's nucleotide sequence