Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1596 and B158DRAFT_1597 are separated by 33 nucleotides B158DRAFT_1597 and B158DRAFT_1598 are separated by 7 nucleotides
B158DRAFT_1596: B158DRAFT_1596 - Biopolymer transport proteins, at 1,656,889 to 1,657,542
_1596
B158DRAFT_1597: B158DRAFT_1597 - Biopolymer transport protein, at 1,657,576 to 1,657,998
_1597
B158DRAFT_1598: B158DRAFT_1598 - lipid A export permease/ATP-binding protein MsbA, at 1,658,006 to 1,659,754
_1598
Position (kb)
1657
1658 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1656.700 kb on - strand at 1656.707 kb on + strand at 1656.707 kb on + strand at 1656.718 kb on + strand at 1656.721 kb on - strand at 1656.721 kb on - strand at 1656.794 kb on + strand at 1656.794 kb on + strand at 1656.819 kb on + strand at 1656.827 kb on - strand at 1656.828 kb on - strand at 1656.920 kb on + strand at 1656.930 kb on + strand at 1656.930 kb on + strand at 1656.930 kb on + strand at 1656.938 kb on - strand at 1656.967 kb on - strand, within B158DRAFT_1596 at 1656.997 kb on - strand, within B158DRAFT_1596 at 1657.005 kb on + strand, within B158DRAFT_1596 at 1657.005 kb on + strand, within B158DRAFT_1596 at 1657.013 kb on - strand, within B158DRAFT_1596 at 1657.013 kb on - strand, within B158DRAFT_1596 at 1657.056 kb on + strand, within B158DRAFT_1596 at 1657.056 kb on + strand, within B158DRAFT_1596 at 1657.056 kb on + strand, within B158DRAFT_1596 at 1657.056 kb on + strand, within B158DRAFT_1596 at 1657.056 kb on + strand, within B158DRAFT_1596 at 1657.056 kb on + strand, within B158DRAFT_1596 at 1657.056 kb on + strand, within B158DRAFT_1596 at 1657.064 kb on - strand, within B158DRAFT_1596 at 1657.064 kb on - strand, within B158DRAFT_1596 at 1657.064 kb on - strand, within B158DRAFT_1596 at 1657.064 kb on - strand, within B158DRAFT_1596 at 1657.064 kb on - strand, within B158DRAFT_1596 at 1657.064 kb on - strand, within B158DRAFT_1596 at 1657.128 kb on + strand, within B158DRAFT_1596 at 1657.134 kb on + strand, within B158DRAFT_1596 at 1657.134 kb on + strand, within B158DRAFT_1596 at 1657.134 kb on + strand, within B158DRAFT_1596 at 1657.134 kb on + strand, within B158DRAFT_1596 at 1657.136 kb on - strand, within B158DRAFT_1596 at 1657.142 kb on - strand, within B158DRAFT_1596 at 1657.142 kb on - strand, within B158DRAFT_1596 at 1657.142 kb on - strand, within B158DRAFT_1596 at 1657.213 kb on + strand, within B158DRAFT_1596 at 1657.213 kb on + strand, within B158DRAFT_1596 at 1657.213 kb on + strand, within B158DRAFT_1596 at 1657.213 kb on + strand, within B158DRAFT_1596 at 1657.213 kb on + strand, within B158DRAFT_1596 at 1657.213 kb on + strand, within B158DRAFT_1596 at 1657.213 kb on + strand, within B158DRAFT_1596 at 1657.213 kb on + strand, within B158DRAFT_1596 at 1657.213 kb on + strand, within B158DRAFT_1596 at 1657.219 kb on - strand, within B158DRAFT_1596 at 1657.221 kb on - strand, within B158DRAFT_1596 at 1657.221 kb on - strand, within B158DRAFT_1596 at 1657.221 kb on - strand, within B158DRAFT_1596 at 1657.263 kb on + strand, within B158DRAFT_1596 at 1657.271 kb on - strand, within B158DRAFT_1596 at 1657.271 kb on - strand, within B158DRAFT_1596 at 1657.271 kb on - strand, within B158DRAFT_1596 at 1657.294 kb on + strand, within B158DRAFT_1596 at 1657.294 kb on + strand, within B158DRAFT_1596 at 1657.335 kb on + strand, within B158DRAFT_1596 at 1657.343 kb on - strand, within B158DRAFT_1596 at 1657.349 kb on - strand, within B158DRAFT_1596 at 1657.391 kb on - strand, within B158DRAFT_1596 at 1657.486 kb on + strand at 1657.486 kb on + strand at 1657.494 kb on - strand at 1657.494 kb on - strand at 1657.504 kb on - strand at 1657.565 kb on - strand at 1657.638 kb on - strand, within B158DRAFT_1597 at 1657.663 kb on + strand, within B158DRAFT_1597 at 1657.671 kb on - strand, within B158DRAFT_1597 at 1657.806 kb on - strand, within B158DRAFT_1597 at 1657.823 kb on + strand, within B158DRAFT_1597 at 1657.835 kb on + strand, within B158DRAFT_1597 at 1657.895 kb on + strand, within B158DRAFT_1597 at 1658.002 kb on + strand at 1658.002 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 1,656,700 - +0.6 1,656,707 + +1.7 1,656,707 + -0.4 1,656,718 + +0.0 1,656,721 - +0.3 1,656,721 - -0.4 1,656,794 + -0.3 1,656,794 + -0.5 1,656,819 + -1.0 1,656,827 - -0.3 1,656,828 - -1.2 1,656,920 + -0.8 1,656,930 + -2.1 1,656,930 + +0.3 1,656,930 + -1.3 1,656,938 - -0.7 1,656,967 - B158DRAFT_1596 0.12 -0.8 1,656,997 - B158DRAFT_1596 0.17 -0.9 1,657,005 + B158DRAFT_1596 0.18 -2.2 1,657,005 + B158DRAFT_1596 0.18 -1.5 1,657,013 - B158DRAFT_1596 0.19 -1.6 1,657,013 - B158DRAFT_1596 0.19 -2.8 1,657,056 + B158DRAFT_1596 0.26 -0.9 1,657,056 + B158DRAFT_1596 0.26 -1.1 1,657,056 + B158DRAFT_1596 0.26 -0.3 1,657,056 + B158DRAFT_1596 0.26 -0.6 1,657,056 + B158DRAFT_1596 0.26 -1.0 1,657,056 + B158DRAFT_1596 0.26 -1.6 1,657,056 + B158DRAFT_1596 0.26 -0.9 1,657,064 - B158DRAFT_1596 0.27 -1.4 1,657,064 - B158DRAFT_1596 0.27 -1.3 1,657,064 - B158DRAFT_1596 0.27 -1.2 1,657,064 - B158DRAFT_1596 0.27 -1.5 1,657,064 - B158DRAFT_1596 0.27 -1.0 1,657,064 - B158DRAFT_1596 0.27 -1.6 1,657,128 + B158DRAFT_1596 0.37 -1.1 1,657,134 + B158DRAFT_1596 0.37 -0.7 1,657,134 + B158DRAFT_1596 0.37 -1.3 1,657,134 + B158DRAFT_1596 0.37 -2.1 1,657,134 + B158DRAFT_1596 0.37 -1.3 1,657,136 - B158DRAFT_1596 0.38 -1.0 1,657,142 - B158DRAFT_1596 0.39 -2.6 1,657,142 - B158DRAFT_1596 0.39 -0.5 1,657,142 - B158DRAFT_1596 0.39 -1.0 1,657,213 + B158DRAFT_1596 0.50 -0.7 1,657,213 + B158DRAFT_1596 0.50 -0.8 1,657,213 + B158DRAFT_1596 0.50 -0.4 1,657,213 + B158DRAFT_1596 0.50 -0.2 1,657,213 + B158DRAFT_1596 0.50 -1.4 1,657,213 + B158DRAFT_1596 0.50 -0.7 1,657,213 + B158DRAFT_1596 0.50 -0.5 1,657,213 + B158DRAFT_1596 0.50 -0.7 1,657,213 + B158DRAFT_1596 0.50 -1.0 1,657,219 - B158DRAFT_1596 0.50 +0.6 1,657,221 - B158DRAFT_1596 0.51 -0.8 1,657,221 - B158DRAFT_1596 0.51 -1.9 1,657,221 - B158DRAFT_1596 0.51 -1.0 1,657,263 + B158DRAFT_1596 0.57 -0.8 1,657,271 - B158DRAFT_1596 0.58 -1.4 1,657,271 - B158DRAFT_1596 0.58 -0.2 1,657,271 - B158DRAFT_1596 0.58 -1.0 1,657,294 + B158DRAFT_1596 0.62 -2.2 1,657,294 + B158DRAFT_1596 0.62 +1.3 1,657,335 + B158DRAFT_1596 0.68 -2.2 1,657,343 - B158DRAFT_1596 0.69 -0.7 1,657,349 - B158DRAFT_1596 0.70 +0.0 1,657,391 - B158DRAFT_1596 0.77 -1.4 1,657,486 + -0.2 1,657,486 + -1.0 1,657,494 - -1.1 1,657,494 - -0.7 1,657,504 - -0.8 1,657,565 - -1.0 1,657,638 - B158DRAFT_1597 0.15 -0.4 1,657,663 + B158DRAFT_1597 0.21 -2.6 1,657,671 - B158DRAFT_1597 0.22 -2.1 1,657,806 - B158DRAFT_1597 0.54 -1.4 1,657,823 + B158DRAFT_1597 0.58 -0.8 1,657,835 + B158DRAFT_1597 0.61 -0.5 1,657,895 + B158DRAFT_1597 0.75 -1.3 1,658,002 + -0.1 1,658,002 + -1.8
Or see this region's nucleotide sequence