Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1490

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1488 and B158DRAFT_1489 are separated by 9 nucleotidesB158DRAFT_1489 and B158DRAFT_1490 overlap by 29 nucleotidesB158DRAFT_1490 and B158DRAFT_1491 are separated by 37 nucleotidesB158DRAFT_1491 and B158DRAFT_1492 overlap by 1 nucleotides B158DRAFT_1488: B158DRAFT_1488 - amidophosphoribosyltransferase (EC 2.4.2.14), at 1,542,615 to 1,544,135 _1488 B158DRAFT_1489: B158DRAFT_1489 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 1,544,145 to 1,544,705 _1489 B158DRAFT_1490: B158DRAFT_1490 - diguanylate cyclase (GGDEF) domain, at 1,544,677 to 1,548,054 _1490 B158DRAFT_1491: B158DRAFT_1491 - hypothetical protein, at 1,548,092 to 1,548,880 _1491 B158DRAFT_1492: B158DRAFT_1492 - FAD/FMN-containing dehydrogenases, at 1,548,880 to 1,550,271 _1492 Position (kb) 1544 1545 1546 1547 1548 1549Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1544.075 kb on - strandat 1544.091 kb on + strandat 1544.092 kb on - strandat 1544.099 kb on - strandat 1544.100 kb on - strandat 1544.182 kb on + strandat 1544.245 kb on + strand, within B158DRAFT_1489at 1544.360 kb on + strand, within B158DRAFT_1489at 1544.384 kb on + strand, within B158DRAFT_1489at 1544.423 kb on - strand, within B158DRAFT_1489at 1544.423 kb on - strand, within B158DRAFT_1489at 1544.484 kb on - strand, within B158DRAFT_1489at 1544.538 kb on + strand, within B158DRAFT_1489at 1544.538 kb on + strand, within B158DRAFT_1489at 1544.583 kb on - strand, within B158DRAFT_1489at 1544.724 kb on - strandat 1544.788 kb on + strandat 1544.788 kb on + strandat 1544.808 kb on - strandat 1544.877 kb on - strandat 1544.894 kb on - strandat 1544.894 kb on - strandat 1544.899 kb on - strandat 1544.915 kb on - strandat 1545.020 kb on - strand, within B158DRAFT_1490at 1545.066 kb on - strand, within B158DRAFT_1490at 1545.066 kb on - strand, within B158DRAFT_1490at 1545.068 kb on + strand, within B158DRAFT_1490at 1545.076 kb on - strand, within B158DRAFT_1490at 1545.083 kb on + strand, within B158DRAFT_1490at 1545.091 kb on - strand, within B158DRAFT_1490at 1545.134 kb on + strand, within B158DRAFT_1490at 1545.142 kb on - strand, within B158DRAFT_1490at 1545.142 kb on - strand, within B158DRAFT_1490at 1545.143 kb on + strand, within B158DRAFT_1490at 1545.147 kb on - strand, within B158DRAFT_1490at 1545.153 kb on + strand, within B158DRAFT_1490at 1545.161 kb on - strand, within B158DRAFT_1490at 1545.162 kb on + strand, within B158DRAFT_1490at 1545.210 kb on - strand, within B158DRAFT_1490at 1545.248 kb on - strand, within B158DRAFT_1490at 1545.302 kb on + strand, within B158DRAFT_1490at 1545.322 kb on - strand, within B158DRAFT_1490at 1545.379 kb on + strand, within B158DRAFT_1490at 1545.402 kb on + strand, within B158DRAFT_1490at 1545.402 kb on + strand, within B158DRAFT_1490at 1545.410 kb on - strand, within B158DRAFT_1490at 1545.411 kb on - strand, within B158DRAFT_1490at 1545.480 kb on - strand, within B158DRAFT_1490at 1545.502 kb on - strand, within B158DRAFT_1490at 1545.536 kb on - strand, within B158DRAFT_1490at 1545.539 kb on + strand, within B158DRAFT_1490at 1545.542 kb on - strand, within B158DRAFT_1490at 1545.554 kb on - strand, within B158DRAFT_1490at 1545.602 kb on - strand, within B158DRAFT_1490at 1545.613 kb on - strand, within B158DRAFT_1490at 1545.742 kb on + strand, within B158DRAFT_1490at 1545.775 kb on - strand, within B158DRAFT_1490at 1545.797 kb on + strand, within B158DRAFT_1490at 1545.813 kb on - strand, within B158DRAFT_1490at 1545.890 kb on - strand, within B158DRAFT_1490at 1545.917 kb on - strand, within B158DRAFT_1490at 1545.979 kb on - strand, within B158DRAFT_1490at 1545.996 kb on - strand, within B158DRAFT_1490at 1546.009 kb on - strand, within B158DRAFT_1490at 1546.009 kb on - strand, within B158DRAFT_1490at 1546.016 kb on - strand, within B158DRAFT_1490at 1546.016 kb on - strand, within B158DRAFT_1490at 1546.077 kb on - strand, within B158DRAFT_1490at 1546.150 kb on + strand, within B158DRAFT_1490at 1546.176 kb on - strand, within B158DRAFT_1490at 1546.186 kb on - strand, within B158DRAFT_1490at 1546.197 kb on - strand, within B158DRAFT_1490at 1546.216 kb on - strand, within B158DRAFT_1490at 1546.268 kb on + strand, within B158DRAFT_1490at 1546.268 kb on + strand, within B158DRAFT_1490at 1546.318 kb on + strand, within B158DRAFT_1490at 1546.318 kb on + strand, within B158DRAFT_1490at 1546.318 kb on + strand, within B158DRAFT_1490at 1546.319 kb on + strand, within B158DRAFT_1490at 1546.326 kb on - strand, within B158DRAFT_1490at 1546.326 kb on - strand, within B158DRAFT_1490at 1546.326 kb on - strand, within B158DRAFT_1490at 1546.326 kb on - strand, within B158DRAFT_1490at 1546.362 kb on - strand, within B158DRAFT_1490at 1546.398 kb on + strand, within B158DRAFT_1490at 1546.417 kb on + strand, within B158DRAFT_1490at 1546.427 kb on - strand, within B158DRAFT_1490at 1546.470 kb on + strand, within B158DRAFT_1490at 1546.522 kb on + strand, within B158DRAFT_1490at 1546.535 kb on + strand, within B158DRAFT_1490at 1546.535 kb on + strand, within B158DRAFT_1490at 1546.543 kb on - strand, within B158DRAFT_1490at 1546.543 kb on - strand, within B158DRAFT_1490at 1546.616 kb on - strand, within B158DRAFT_1490at 1546.635 kb on + strand, within B158DRAFT_1490at 1546.643 kb on - strand, within B158DRAFT_1490at 1546.645 kb on + strand, within B158DRAFT_1490at 1546.662 kb on + strand, within B158DRAFT_1490at 1546.691 kb on + strand, within B158DRAFT_1490at 1546.719 kb on - strand, within B158DRAFT_1490at 1546.770 kb on + strand, within B158DRAFT_1490at 1546.770 kb on + strand, within B158DRAFT_1490at 1546.778 kb on - strand, within B158DRAFT_1490at 1546.778 kb on - strand, within B158DRAFT_1490at 1546.831 kb on + strand, within B158DRAFT_1490at 1546.839 kb on - strand, within B158DRAFT_1490at 1546.860 kb on - strand, within B158DRAFT_1490at 1546.864 kb on + strand, within B158DRAFT_1490at 1546.865 kb on - strand, within B158DRAFT_1490at 1546.869 kb on + strand, within B158DRAFT_1490at 1546.917 kb on + strand, within B158DRAFT_1490at 1546.925 kb on - strand, within B158DRAFT_1490at 1546.975 kb on + strand, within B158DRAFT_1490at 1546.975 kb on + strand, within B158DRAFT_1490at 1546.976 kb on - strand, within B158DRAFT_1490at 1546.983 kb on - strand, within B158DRAFT_1490at 1546.983 kb on - strand, within B158DRAFT_1490at 1547.097 kb on - strand, within B158DRAFT_1490at 1547.097 kb on - strand, within B158DRAFT_1490at 1547.135 kb on - strand, within B158DRAFT_1490at 1547.147 kb on + strand, within B158DRAFT_1490at 1547.147 kb on + strand, within B158DRAFT_1490at 1547.155 kb on - strand, within B158DRAFT_1490at 1547.278 kb on + strand, within B158DRAFT_1490at 1547.318 kb on - strand, within B158DRAFT_1490at 1547.337 kb on - strand, within B158DRAFT_1490at 1547.389 kb on - strand, within B158DRAFT_1490at 1547.399 kb on - strand, within B158DRAFT_1490at 1547.399 kb on - strand, within B158DRAFT_1490at 1547.492 kb on + strand, within B158DRAFT_1490at 1547.492 kb on + strand, within B158DRAFT_1490at 1547.492 kb on + strand, within B158DRAFT_1490at 1547.507 kb on + strand, within B158DRAFT_1490at 1547.507 kb on + strand, within B158DRAFT_1490at 1547.507 kb on + strand, within B158DRAFT_1490at 1547.507 kb on + strand, within B158DRAFT_1490at 1547.507 kb on + strand, within B158DRAFT_1490at 1547.515 kb on - strand, within B158DRAFT_1490at 1547.515 kb on - strand, within B158DRAFT_1490at 1547.515 kb on - strand, within B158DRAFT_1490at 1547.515 kb on - strand, within B158DRAFT_1490at 1547.515 kb on - strand, within B158DRAFT_1490at 1547.515 kb on - strand, within B158DRAFT_1490at 1547.515 kb on - strand, within B158DRAFT_1490at 1547.515 kb on - strand, within B158DRAFT_1490at 1547.515 kb on - strand, within B158DRAFT_1490at 1547.515 kb on - strand, within B158DRAFT_1490at 1547.515 kb on - strand, within B158DRAFT_1490at 1547.552 kb on + strand, within B158DRAFT_1490at 1547.574 kb on + strand, within B158DRAFT_1490at 1547.658 kb on + strand, within B158DRAFT_1490at 1547.658 kb on + strand, within B158DRAFT_1490at 1547.658 kb on + strand, within B158DRAFT_1490at 1547.660 kb on + strand, within B158DRAFT_1490at 1547.709 kb on - strand, within B158DRAFT_1490at 1547.727 kb on - strandat 1547.727 kb on - strandat 1547.782 kb on - strandat 1547.792 kb on - strandat 1547.792 kb on - strandat 1547.843 kb on + strandat 1547.843 kb on + strandat 1547.851 kb on - strandat 1547.851 kb on - strandat 1547.877 kb on - strandat 1548.042 kb on + strandat 1548.085 kb on + strandat 1548.093 kb on - strandat 1548.095 kb on + strandat 1548.103 kb on - strandat 1548.118 kb on - strandat 1548.130 kb on - strandat 1548.181 kb on + strand, within B158DRAFT_1491at 1548.208 kb on + strand, within B158DRAFT_1491at 1548.234 kb on - strand, within B158DRAFT_1491at 1548.234 kb on - strand, within B158DRAFT_1491at 1548.244 kb on + strand, within B158DRAFT_1491at 1548.252 kb on - strand, within B158DRAFT_1491at 1548.257 kb on - strand, within B158DRAFT_1491at 1548.288 kb on - strand, within B158DRAFT_1491at 1548.382 kb on - strand, within B158DRAFT_1491at 1548.583 kb on - strand, within B158DRAFT_1491at 1548.588 kb on - strand, within B158DRAFT_1491at 1548.835 kb on + strandat 1548.862 kb on + strandat 1548.862 kb on + strandat 1548.911 kb on + strandat 1548.918 kb on + strandat 1548.918 kb on + strandat 1548.926 kb on - strandat 1548.926 kb on - strandat 1548.926 kb on - strandat 1548.926 kb on - strandat 1548.926 kb on - strandat 1548.926 kb on - strandat 1548.926 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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1,544,075 - -1.6
1,544,091 + -1.5
1,544,092 - -2.7
1,544,099 - -1.8
1,544,100 - -2.3
1,544,182 + -1.5
1,544,245 + B158DRAFT_1489 0.18 -0.8
1,544,360 + B158DRAFT_1489 0.38 -0.5
1,544,384 + B158DRAFT_1489 0.43 -0.9
1,544,423 - B158DRAFT_1489 0.50 -0.8
1,544,423 - B158DRAFT_1489 0.50 -1.0
1,544,484 - B158DRAFT_1489 0.60 -1.6
1,544,538 + B158DRAFT_1489 0.70 -1.3
1,544,538 + B158DRAFT_1489 0.70 -1.6
1,544,583 - B158DRAFT_1489 0.78 -1.7
1,544,724 - -1.0
1,544,788 + -0.5
1,544,788 + -2.9
1,544,808 - -1.5
1,544,877 - -1.3
1,544,894 - -1.3
1,544,894 - -1.4
1,544,899 - -0.9
1,544,915 - -3.0
1,545,020 - B158DRAFT_1490 0.10 -2.2
1,545,066 - B158DRAFT_1490 0.12 -1.9
1,545,066 - B158DRAFT_1490 0.12 -0.8
1,545,068 + B158DRAFT_1490 0.12 -2.0
1,545,076 - B158DRAFT_1490 0.12 -1.3
1,545,083 + B158DRAFT_1490 0.12 +0.3
1,545,091 - B158DRAFT_1490 0.12 +1.0
1,545,134 + B158DRAFT_1490 0.14 -1.4
1,545,142 - B158DRAFT_1490 0.14 -3.2
1,545,142 - B158DRAFT_1490 0.14 -2.9
1,545,143 + B158DRAFT_1490 0.14 -2.0
1,545,147 - B158DRAFT_1490 0.14 -1.5
1,545,153 + B158DRAFT_1490 0.14 -1.9
1,545,161 - B158DRAFT_1490 0.14 -1.5
1,545,162 + B158DRAFT_1490 0.14 -1.7
1,545,210 - B158DRAFT_1490 0.16 -1.7
1,545,248 - B158DRAFT_1490 0.17 -0.8
1,545,302 + B158DRAFT_1490 0.19 -1.1
1,545,322 - B158DRAFT_1490 0.19 -1.8
1,545,379 + B158DRAFT_1490 0.21 -2.7
1,545,402 + B158DRAFT_1490 0.21 -1.4
1,545,402 + B158DRAFT_1490 0.21 +0.3
1,545,410 - B158DRAFT_1490 0.22 -0.9
1,545,411 - B158DRAFT_1490 0.22 -2.5
1,545,480 - B158DRAFT_1490 0.24 -1.3
1,545,502 - B158DRAFT_1490 0.24 -2.2
1,545,536 - B158DRAFT_1490 0.25 -0.9
1,545,539 + B158DRAFT_1490 0.26 -1.4
1,545,542 - B158DRAFT_1490 0.26 -0.3
1,545,554 - B158DRAFT_1490 0.26 -1.1
1,545,602 - B158DRAFT_1490 0.27 -1.3
1,545,613 - B158DRAFT_1490 0.28 -2.7
1,545,742 + B158DRAFT_1490 0.32 -1.5
1,545,775 - B158DRAFT_1490 0.33 -2.2
1,545,797 + B158DRAFT_1490 0.33 -0.2
1,545,813 - B158DRAFT_1490 0.34 -2.7
1,545,890 - B158DRAFT_1490 0.36 -1.0
1,545,917 - B158DRAFT_1490 0.37 -1.9
1,545,979 - B158DRAFT_1490 0.39 -1.7
1,545,996 - B158DRAFT_1490 0.39 -2.1
1,546,009 - B158DRAFT_1490 0.39 -1.2
1,546,009 - B158DRAFT_1490 0.39 -1.8
1,546,016 - B158DRAFT_1490 0.40 -2.4
1,546,016 - B158DRAFT_1490 0.40 -1.6
1,546,077 - B158DRAFT_1490 0.41 -2.4
1,546,150 + B158DRAFT_1490 0.44 -1.5
1,546,176 - B158DRAFT_1490 0.44 -1.0
1,546,186 - B158DRAFT_1490 0.45 -1.5
1,546,197 - B158DRAFT_1490 0.45 -2.7
1,546,216 - B158DRAFT_1490 0.46 -1.8
1,546,268 + B158DRAFT_1490 0.47 -1.8
1,546,268 + B158DRAFT_1490 0.47 -1.8
1,546,318 + B158DRAFT_1490 0.49 -2.0
1,546,318 + B158DRAFT_1490 0.49 -1.6
1,546,318 + B158DRAFT_1490 0.49 -2.0
1,546,319 + B158DRAFT_1490 0.49 -1.8
1,546,326 - B158DRAFT_1490 0.49 -0.3
1,546,326 - B158DRAFT_1490 0.49 -2.0
1,546,326 - B158DRAFT_1490 0.49 -0.5
1,546,326 - B158DRAFT_1490 0.49 -1.2
1,546,362 - B158DRAFT_1490 0.50 -0.5
1,546,398 + B158DRAFT_1490 0.51 -1.0
1,546,417 + B158DRAFT_1490 0.52 -1.6
1,546,427 - B158DRAFT_1490 0.52 -0.9
1,546,470 + B158DRAFT_1490 0.53 -1.9
1,546,522 + B158DRAFT_1490 0.55 -2.6
1,546,535 + B158DRAFT_1490 0.55 -1.4
1,546,535 + B158DRAFT_1490 0.55 -1.7
1,546,543 - B158DRAFT_1490 0.55 -1.9
1,546,543 - B158DRAFT_1490 0.55 -1.6
1,546,616 - B158DRAFT_1490 0.57 -0.9
1,546,635 + B158DRAFT_1490 0.58 -0.6
1,546,643 - B158DRAFT_1490 0.58 -1.8
1,546,645 + B158DRAFT_1490 0.58 -1.0
1,546,662 + B158DRAFT_1490 0.59 -2.1
1,546,691 + B158DRAFT_1490 0.60 -2.6
1,546,719 - B158DRAFT_1490 0.60 -2.0
1,546,770 + B158DRAFT_1490 0.62 -1.8
1,546,770 + B158DRAFT_1490 0.62 -1.2
1,546,778 - B158DRAFT_1490 0.62 -2.3
1,546,778 - B158DRAFT_1490 0.62 -1.2
1,546,831 + B158DRAFT_1490 0.64 -0.5
1,546,839 - B158DRAFT_1490 0.64 -1.4
1,546,860 - B158DRAFT_1490 0.65 -1.9
1,546,864 + B158DRAFT_1490 0.65 -1.8
1,546,865 - B158DRAFT_1490 0.65 -1.7
1,546,869 + B158DRAFT_1490 0.65 -0.9
1,546,917 + B158DRAFT_1490 0.66 -1.6
1,546,925 - B158DRAFT_1490 0.67 -1.6
1,546,975 + B158DRAFT_1490 0.68 -1.5
1,546,975 + B158DRAFT_1490 0.68 -1.8
1,546,976 - B158DRAFT_1490 0.68 -1.1
1,546,983 - B158DRAFT_1490 0.68 -1.2
1,546,983 - B158DRAFT_1490 0.68 -1.1
1,547,097 - B158DRAFT_1490 0.72 -1.3
1,547,097 - B158DRAFT_1490 0.72 -1.5
1,547,135 - B158DRAFT_1490 0.73 -2.2
1,547,147 + B158DRAFT_1490 0.73 -1.3
1,547,147 + B158DRAFT_1490 0.73 -1.1
1,547,155 - B158DRAFT_1490 0.73 -1.6
1,547,278 + B158DRAFT_1490 0.77 -0.8
1,547,318 - B158DRAFT_1490 0.78 -1.8
1,547,337 - B158DRAFT_1490 0.79 -1.5
1,547,389 - B158DRAFT_1490 0.80 -2.0
1,547,399 - B158DRAFT_1490 0.81 -1.3
1,547,399 - B158DRAFT_1490 0.81 -0.6
1,547,492 + B158DRAFT_1490 0.83 -0.7
1,547,492 + B158DRAFT_1490 0.83 -1.3
1,547,492 + B158DRAFT_1490 0.83 -1.0
1,547,507 + B158DRAFT_1490 0.84 -1.4
1,547,507 + B158DRAFT_1490 0.84 -1.3
1,547,507 + B158DRAFT_1490 0.84 -1.8
1,547,507 + B158DRAFT_1490 0.84 -2.2
1,547,507 + B158DRAFT_1490 0.84 -1.3
1,547,515 - B158DRAFT_1490 0.84 -1.7
1,547,515 - B158DRAFT_1490 0.84 -0.8
1,547,515 - B158DRAFT_1490 0.84 -1.5
1,547,515 - B158DRAFT_1490 0.84 -1.2
1,547,515 - B158DRAFT_1490 0.84 -0.6
1,547,515 - B158DRAFT_1490 0.84 -0.6
1,547,515 - B158DRAFT_1490 0.84 -2.1
1,547,515 - B158DRAFT_1490 0.84 -2.2
1,547,515 - B158DRAFT_1490 0.84 -0.5
1,547,515 - B158DRAFT_1490 0.84 -2.1
1,547,515 - B158DRAFT_1490 0.84 -1.0
1,547,552 + B158DRAFT_1490 0.85 -3.3
1,547,574 + B158DRAFT_1490 0.86 -2.3
1,547,658 + B158DRAFT_1490 0.88 -2.2
1,547,658 + B158DRAFT_1490 0.88 -2.0
1,547,658 + B158DRAFT_1490 0.88 -3.0
1,547,660 + B158DRAFT_1490 0.88 -2.3
1,547,709 - B158DRAFT_1490 0.90 -2.4
1,547,727 - -1.4
1,547,727 - -0.6
1,547,782 - -2.1
1,547,792 - -1.2
1,547,792 - -4.1
1,547,843 + -1.0
1,547,843 + -2.0
1,547,851 - -0.8
1,547,851 - -1.9
1,547,877 - -1.6
1,548,042 + -0.2
1,548,085 + +0.0
1,548,093 - +0.2
1,548,095 + -0.9
1,548,103 - +0.0
1,548,118 - -0.1
1,548,130 - +0.5
1,548,181 + B158DRAFT_1491 0.11 +0.9
1,548,208 + B158DRAFT_1491 0.15 +0.7
1,548,234 - B158DRAFT_1491 0.18 +0.5
1,548,234 - B158DRAFT_1491 0.18 +0.7
1,548,244 + B158DRAFT_1491 0.19 +0.1
1,548,252 - B158DRAFT_1491 0.20 +0.0
1,548,257 - B158DRAFT_1491 0.21 +0.1
1,548,288 - B158DRAFT_1491 0.25 -0.3
1,548,382 - B158DRAFT_1491 0.37 +0.1
1,548,583 - B158DRAFT_1491 0.62 -1.3
1,548,588 - B158DRAFT_1491 0.63 -0.5
1,548,835 + -0.9
1,548,862 + +1.4
1,548,862 + -0.7
1,548,911 + -1.7
1,548,918 + -0.8
1,548,918 + -0.5
1,548,926 - -1.1
1,548,926 - -0.8
1,548,926 - -1.5
1,548,926 - -1.2
1,548,926 - -1.2
1,548,926 - -1.1
1,548,926 - -1.9

Or see this region's nucleotide sequence