Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1489

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1488 and B158DRAFT_1489 are separated by 9 nucleotidesB158DRAFT_1489 and B158DRAFT_1490 overlap by 29 nucleotides B158DRAFT_1488: B158DRAFT_1488 - amidophosphoribosyltransferase (EC 2.4.2.14), at 1,542,615 to 1,544,135 _1488 B158DRAFT_1489: B158DRAFT_1489 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 1,544,145 to 1,544,705 _1489 B158DRAFT_1490: B158DRAFT_1490 - diguanylate cyclase (GGDEF) domain, at 1,544,677 to 1,548,054 _1490 Position (kb) 1544 1545Strain fitness (log2 ratio) -3 -2 -1 0 1at 1544.075 kb on - strandat 1544.091 kb on + strandat 1544.092 kb on - strandat 1544.099 kb on - strandat 1544.100 kb on - strandat 1544.182 kb on + strandat 1544.245 kb on + strand, within B158DRAFT_1489at 1544.360 kb on + strand, within B158DRAFT_1489at 1544.384 kb on + strand, within B158DRAFT_1489at 1544.423 kb on - strand, within B158DRAFT_1489at 1544.423 kb on - strand, within B158DRAFT_1489at 1544.484 kb on - strand, within B158DRAFT_1489at 1544.538 kb on + strand, within B158DRAFT_1489at 1544.538 kb on + strand, within B158DRAFT_1489at 1544.583 kb on - strand, within B158DRAFT_1489at 1544.724 kb on - strandat 1544.788 kb on + strandat 1544.788 kb on + strandat 1544.808 kb on - strandat 1544.877 kb on - strandat 1544.894 kb on - strandat 1544.894 kb on - strandat 1544.899 kb on - strandat 1544.915 kb on - strandat 1545.020 kb on - strand, within B158DRAFT_1490at 1545.066 kb on - strand, within B158DRAFT_1490at 1545.066 kb on - strand, within B158DRAFT_1490at 1545.068 kb on + strand, within B158DRAFT_1490at 1545.076 kb on - strand, within B158DRAFT_1490at 1545.083 kb on + strand, within B158DRAFT_1490at 1545.091 kb on - strand, within B158DRAFT_1490at 1545.134 kb on + strand, within B158DRAFT_1490at 1545.142 kb on - strand, within B158DRAFT_1490at 1545.142 kb on - strand, within B158DRAFT_1490at 1545.143 kb on + strand, within B158DRAFT_1490at 1545.147 kb on - strand, within B158DRAFT_1490at 1545.153 kb on + strand, within B158DRAFT_1490at 1545.161 kb on - strand, within B158DRAFT_1490at 1545.162 kb on + strand, within B158DRAFT_1490at 1545.210 kb on - strand, within B158DRAFT_1490at 1545.248 kb on - strand, within B158DRAFT_1490at 1545.302 kb on + strand, within B158DRAFT_1490at 1545.322 kb on - strand, within B158DRAFT_1490at 1545.379 kb on + strand, within B158DRAFT_1490at 1545.402 kb on + strand, within B158DRAFT_1490at 1545.402 kb on + strand, within B158DRAFT_1490at 1545.410 kb on - strand, within B158DRAFT_1490at 1545.411 kb on - strand, within B158DRAFT_1490at 1545.480 kb on - strand, within B158DRAFT_1490at 1545.502 kb on - strand, within B158DRAFT_1490at 1545.536 kb on - strand, within B158DRAFT_1490at 1545.539 kb on + strand, within B158DRAFT_1490at 1545.542 kb on - strand, within B158DRAFT_1490at 1545.554 kb on - strand, within B158DRAFT_1490at 1545.602 kb on - strand, within B158DRAFT_1490at 1545.613 kb on - strand, within B158DRAFT_1490

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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1,544,075 - -1.6
1,544,091 + -1.5
1,544,092 - -2.7
1,544,099 - -1.8
1,544,100 - -2.3
1,544,182 + -1.5
1,544,245 + B158DRAFT_1489 0.18 -0.8
1,544,360 + B158DRAFT_1489 0.38 -0.5
1,544,384 + B158DRAFT_1489 0.43 -0.9
1,544,423 - B158DRAFT_1489 0.50 -0.8
1,544,423 - B158DRAFT_1489 0.50 -1.0
1,544,484 - B158DRAFT_1489 0.60 -1.6
1,544,538 + B158DRAFT_1489 0.70 -1.3
1,544,538 + B158DRAFT_1489 0.70 -1.6
1,544,583 - B158DRAFT_1489 0.78 -1.7
1,544,724 - -1.0
1,544,788 + -0.5
1,544,788 + -2.9
1,544,808 - -1.5
1,544,877 - -1.3
1,544,894 - -1.3
1,544,894 - -1.4
1,544,899 - -0.9
1,544,915 - -3.0
1,545,020 - B158DRAFT_1490 0.10 -2.2
1,545,066 - B158DRAFT_1490 0.12 -1.9
1,545,066 - B158DRAFT_1490 0.12 -0.8
1,545,068 + B158DRAFT_1490 0.12 -2.0
1,545,076 - B158DRAFT_1490 0.12 -1.3
1,545,083 + B158DRAFT_1490 0.12 +0.3
1,545,091 - B158DRAFT_1490 0.12 +1.0
1,545,134 + B158DRAFT_1490 0.14 -1.4
1,545,142 - B158DRAFT_1490 0.14 -3.2
1,545,142 - B158DRAFT_1490 0.14 -2.9
1,545,143 + B158DRAFT_1490 0.14 -2.0
1,545,147 - B158DRAFT_1490 0.14 -1.5
1,545,153 + B158DRAFT_1490 0.14 -1.9
1,545,161 - B158DRAFT_1490 0.14 -1.5
1,545,162 + B158DRAFT_1490 0.14 -1.7
1,545,210 - B158DRAFT_1490 0.16 -1.7
1,545,248 - B158DRAFT_1490 0.17 -0.8
1,545,302 + B158DRAFT_1490 0.19 -1.1
1,545,322 - B158DRAFT_1490 0.19 -1.8
1,545,379 + B158DRAFT_1490 0.21 -2.7
1,545,402 + B158DRAFT_1490 0.21 -1.4
1,545,402 + B158DRAFT_1490 0.21 +0.3
1,545,410 - B158DRAFT_1490 0.22 -0.9
1,545,411 - B158DRAFT_1490 0.22 -2.5
1,545,480 - B158DRAFT_1490 0.24 -1.3
1,545,502 - B158DRAFT_1490 0.24 -2.2
1,545,536 - B158DRAFT_1490 0.25 -0.9
1,545,539 + B158DRAFT_1490 0.26 -1.4
1,545,542 - B158DRAFT_1490 0.26 -0.3
1,545,554 - B158DRAFT_1490 0.26 -1.1
1,545,602 - B158DRAFT_1490 0.27 -1.3
1,545,613 - B158DRAFT_1490 0.28 -2.7

Or see this region's nucleotide sequence