Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1486 and B158DRAFT_1487 are separated by 62 nucleotides B158DRAFT_1487 and B158DRAFT_1488 are separated by 1 nucleotides B158DRAFT_1488 and B158DRAFT_1489 are separated by 9 nucleotides B158DRAFT_1489 and B158DRAFT_1490 overlap by 29 nucleotides
B158DRAFT_1486: B158DRAFT_1486 - Uncharacterized protein conserved in bacteria, at 1,541,190 to 1,542,026
_1486
B158DRAFT_1487: B158DRAFT_1487 - Uncharacterized membrane protein, required for colicin V production, at 1,542,089 to 1,542,613
_1487
B158DRAFT_1488: B158DRAFT_1488 - amidophosphoribosyltransferase (EC 2.4.2.14), at 1,542,615 to 1,544,135
_1488
B158DRAFT_1489: B158DRAFT_1489 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 1,544,145 to 1,544,705
_1489
B158DRAFT_1490: B158DRAFT_1490 - diguanylate cyclase (GGDEF) domain, at 1,544,677 to 1,548,054
_1490
Position (kb)
1542
1543
1544
1545 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1541.627 kb on + strand, within B158DRAFT_1486 at 1541.635 kb on - strand, within B158DRAFT_1486 at 1541.677 kb on - strand, within B158DRAFT_1486 at 1541.718 kb on - strand, within B158DRAFT_1486 at 1541.831 kb on + strand, within B158DRAFT_1486 at 1541.858 kb on + strand, within B158DRAFT_1486 at 1541.866 kb on - strand, within B158DRAFT_1486 at 1541.866 kb on - strand, within B158DRAFT_1486 at 1541.870 kb on + strand, within B158DRAFT_1486 at 1541.870 kb on + strand, within B158DRAFT_1486 at 1541.870 kb on + strand, within B158DRAFT_1486 at 1541.873 kb on + strand, within B158DRAFT_1486 at 1541.873 kb on + strand, within B158DRAFT_1486 at 1541.873 kb on + strand, within B158DRAFT_1486 at 1541.873 kb on + strand, within B158DRAFT_1486 at 1541.873 kb on + strand, within B158DRAFT_1486 at 1541.873 kb on + strand, within B158DRAFT_1486 at 1541.878 kb on - strand, within B158DRAFT_1486 at 1541.878 kb on - strand, within B158DRAFT_1486 at 1541.881 kb on - strand, within B158DRAFT_1486 at 1541.900 kb on - strand, within B158DRAFT_1486 at 1541.918 kb on + strand, within B158DRAFT_1486 at 1541.918 kb on + strand, within B158DRAFT_1486 at 1541.926 kb on - strand, within B158DRAFT_1486 at 1541.952 kb on + strand at 1541.962 kb on - strand at 1541.986 kb on - strand at 1541.990 kb on + strand at 1541.990 kb on + strand at 1541.990 kb on + strand at 1541.990 kb on + strand at 1541.990 kb on + strand at 1541.990 kb on + strand at 1541.990 kb on + strand at 1541.991 kb on - strand at 1541.998 kb on - strand at 1541.998 kb on - strand at 1541.998 kb on - strand at 1541.998 kb on - strand at 1541.998 kb on - strand at 1541.999 kb on + strand at 1542.012 kb on - strand at 1542.365 kb on + strand, within B158DRAFT_1487 at 1542.370 kb on + strand, within B158DRAFT_1487 at 1542.409 kb on + strand, within B158DRAFT_1487 at 1542.409 kb on + strand, within B158DRAFT_1487 at 1542.409 kb on + strand, within B158DRAFT_1487 at 1542.409 kb on + strand, within B158DRAFT_1487 at 1542.409 kb on + strand, within B158DRAFT_1487 at 1542.409 kb on + strand, within B158DRAFT_1487 at 1542.409 kb on + strand, within B158DRAFT_1487 at 1542.457 kb on + strand, within B158DRAFT_1487 at 1544.075 kb on - strand at 1544.091 kb on + strand at 1544.092 kb on - strand at 1544.099 kb on - strand at 1544.100 kb on - strand at 1544.182 kb on + strand at 1544.245 kb on + strand, within B158DRAFT_1489 at 1544.360 kb on + strand, within B158DRAFT_1489 at 1544.384 kb on + strand, within B158DRAFT_1489 at 1544.423 kb on - strand, within B158DRAFT_1489 at 1544.423 kb on - strand, within B158DRAFT_1489 at 1544.484 kb on - strand, within B158DRAFT_1489 at 1544.538 kb on + strand, within B158DRAFT_1489 at 1544.538 kb on + strand, within B158DRAFT_1489 at 1544.583 kb on - strand, within B158DRAFT_1489 at 1544.724 kb on - strand at 1544.788 kb on + strand at 1544.788 kb on + strand at 1544.808 kb on - strand at 1544.877 kb on - strand at 1544.894 kb on - strand at 1544.894 kb on - strand at 1544.899 kb on - strand at 1544.915 kb on - strand at 1545.020 kb on - strand, within B158DRAFT_1490 at 1545.066 kb on - strand, within B158DRAFT_1490 at 1545.066 kb on - strand, within B158DRAFT_1490 at 1545.068 kb on + strand, within B158DRAFT_1490 at 1545.076 kb on - strand, within B158DRAFT_1490 at 1545.083 kb on + strand, within B158DRAFT_1490 at 1545.091 kb on - strand, within B158DRAFT_1490 at 1545.134 kb on + strand, within B158DRAFT_1490
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 1,541,627 + B158DRAFT_1486 0.52 +0.2 1,541,635 - B158DRAFT_1486 0.53 +1.2 1,541,677 - B158DRAFT_1486 0.58 +0.3 1,541,718 - B158DRAFT_1486 0.63 +0.2 1,541,831 + B158DRAFT_1486 0.77 +0.2 1,541,858 + B158DRAFT_1486 0.80 +2.0 1,541,866 - B158DRAFT_1486 0.81 +0.9 1,541,866 - B158DRAFT_1486 0.81 -0.1 1,541,870 + B158DRAFT_1486 0.81 +0.6 1,541,870 + B158DRAFT_1486 0.81 -0.6 1,541,870 + B158DRAFT_1486 0.81 -0.3 1,541,873 + B158DRAFT_1486 0.82 +0.3 1,541,873 + B158DRAFT_1486 0.82 +0.4 1,541,873 + B158DRAFT_1486 0.82 -0.0 1,541,873 + B158DRAFT_1486 0.82 -0.2 1,541,873 + B158DRAFT_1486 0.82 +0.8 1,541,873 + B158DRAFT_1486 0.82 +0.1 1,541,878 - B158DRAFT_1486 0.82 +0.0 1,541,878 - B158DRAFT_1486 0.82 +0.5 1,541,881 - B158DRAFT_1486 0.83 +0.7 1,541,900 - B158DRAFT_1486 0.85 +0.5 1,541,918 + B158DRAFT_1486 0.87 -0.1 1,541,918 + B158DRAFT_1486 0.87 -0.2 1,541,926 - B158DRAFT_1486 0.88 -0.0 1,541,952 + -0.1 1,541,962 - +0.8 1,541,986 - +0.6 1,541,990 + +0.4 1,541,990 + +0.6 1,541,990 + -0.5 1,541,990 + -0.1 1,541,990 + +0.4 1,541,990 + -1.6 1,541,990 + -0.3 1,541,991 - -0.5 1,541,998 - +1.0 1,541,998 - +0.5 1,541,998 - +0.0 1,541,998 - -0.1 1,541,998 - +0.1 1,541,999 + -0.7 1,542,012 - +0.3 1,542,365 + B158DRAFT_1487 0.53 -2.4 1,542,370 + B158DRAFT_1487 0.54 -2.3 1,542,409 + B158DRAFT_1487 0.61 -1.6 1,542,409 + B158DRAFT_1487 0.61 -2.2 1,542,409 + B158DRAFT_1487 0.61 -2.3 1,542,409 + B158DRAFT_1487 0.61 -2.5 1,542,409 + B158DRAFT_1487 0.61 -1.3 1,542,409 + B158DRAFT_1487 0.61 -2.0 1,542,409 + B158DRAFT_1487 0.61 -3.3 1,542,457 + B158DRAFT_1487 0.70 -2.8 1,544,075 - -1.6 1,544,091 + -1.5 1,544,092 - -2.7 1,544,099 - -1.8 1,544,100 - -2.3 1,544,182 + -1.5 1,544,245 + B158DRAFT_1489 0.18 -0.8 1,544,360 + B158DRAFT_1489 0.38 -0.5 1,544,384 + B158DRAFT_1489 0.43 -0.9 1,544,423 - B158DRAFT_1489 0.50 -0.8 1,544,423 - B158DRAFT_1489 0.50 -1.0 1,544,484 - B158DRAFT_1489 0.60 -1.6 1,544,538 + B158DRAFT_1489 0.70 -1.3 1,544,538 + B158DRAFT_1489 0.70 -1.6 1,544,583 - B158DRAFT_1489 0.78 -1.7 1,544,724 - -1.0 1,544,788 + -0.5 1,544,788 + -2.9 1,544,808 - -1.5 1,544,877 - -1.3 1,544,894 - -1.3 1,544,894 - -1.4 1,544,899 - -0.9 1,544,915 - -3.0 1,545,020 - B158DRAFT_1490 0.10 -2.2 1,545,066 - B158DRAFT_1490 0.12 -1.9 1,545,066 - B158DRAFT_1490 0.12 -0.8 1,545,068 + B158DRAFT_1490 0.12 -2.0 1,545,076 - B158DRAFT_1490 0.12 -1.3 1,545,083 + B158DRAFT_1490 0.12 +0.3 1,545,091 - B158DRAFT_1490 0.12 +1.0 1,545,134 + B158DRAFT_1490 0.14 -1.4
Or see this region's nucleotide sequence