Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1453

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1451 and B158DRAFT_1452 are separated by 196 nucleotidesB158DRAFT_1452 and B158DRAFT_1453 overlap by 1 nucleotidesB158DRAFT_1453 and B158DRAFT_1454 are separated by 64 nucleotidesB158DRAFT_1454 and B158DRAFT_1455 are separated by 114 nucleotides B158DRAFT_1451: B158DRAFT_1451 - Dehydrogenases (flavoproteins), at 1,505,248 to 1,506,888 _1451 B158DRAFT_1452: B158DRAFT_1452 - electron transfer flavoprotein beta subunit, at 1,507,085 to 1,507,834 _1452 B158DRAFT_1453: B158DRAFT_1453 - electron transfer flavoprotein alpha subunit apoprotein, at 1,507,834 to 1,508,763 _1453 B158DRAFT_1454: B158DRAFT_1454 - Protein of unknown function (DUF1338)., at 1,508,828 to 1,509,625 _1454 B158DRAFT_1455: B158DRAFT_1455 - Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family, at 1,509,740 to 1,510,516 _1455 Position (kb) 1507 1508 1509Strain fitness (log2 ratio) -3 -2 -1 0 1at 1506.855 kb on + strandat 1506.915 kb on - strandat 1506.987 kb on + strandat 1507.044 kb on - strandat 1507.145 kb on - strandat 1507.307 kb on + strand, within B158DRAFT_1452at 1507.315 kb on - strand, within B158DRAFT_1452at 1507.315 kb on - strand, within B158DRAFT_1452at 1507.382 kb on + strand, within B158DRAFT_1452at 1507.464 kb on - strand, within B158DRAFT_1452at 1507.466 kb on + strand, within B158DRAFT_1452at 1507.534 kb on + strand, within B158DRAFT_1452at 1507.654 kb on - strand, within B158DRAFT_1452at 1507.801 kb on - strandat 1508.247 kb on - strand, within B158DRAFT_1453at 1508.294 kb on - strand, within B158DRAFT_1453at 1508.409 kb on - strand, within B158DRAFT_1453at 1508.453 kb on - strand, within B158DRAFT_1453at 1508.628 kb on - strand, within B158DRAFT_1453at 1508.643 kb on - strand, within B158DRAFT_1453at 1508.745 kb on - strandat 1508.882 kb on + strandat 1508.898 kb on + strandat 1508.906 kb on - strandat 1508.949 kb on + strand, within B158DRAFT_1454at 1508.957 kb on - strand, within B158DRAFT_1454at 1509.004 kb on + strand, within B158DRAFT_1454at 1509.024 kb on - strand, within B158DRAFT_1454at 1509.139 kb on + strand, within B158DRAFT_1454at 1509.160 kb on - strand, within B158DRAFT_1454at 1509.252 kb on - strand, within B158DRAFT_1454at 1509.323 kb on - strand, within B158DRAFT_1454at 1509.350 kb on + strand, within B158DRAFT_1454at 1509.419 kb on + strand, within B158DRAFT_1454at 1509.476 kb on - strand, within B158DRAFT_1454at 1509.490 kb on + strand, within B158DRAFT_1454at 1509.490 kb on + strand, within B158DRAFT_1454at 1509.498 kb on - strand, within B158DRAFT_1454at 1509.498 kb on - strand, within B158DRAFT_1454at 1509.498 kb on - strand, within B158DRAFT_1454at 1509.498 kb on - strand, within B158DRAFT_1454at 1509.500 kb on + strand, within B158DRAFT_1454at 1509.500 kb on + strand, within B158DRAFT_1454at 1509.508 kb on - strand, within B158DRAFT_1454at 1509.606 kb on + strandat 1509.606 kb on + strandat 1509.606 kb on + strandat 1509.606 kb on + strandat 1509.606 kb on + strandat 1509.606 kb on + strandat 1509.606 kb on + strandat 1509.606 kb on + strandat 1509.606 kb on + strandat 1509.606 kb on + strandat 1509.606 kb on + strandat 1509.606 kb on + strandat 1509.606 kb on + strandat 1509.614 kb on - strandat 1509.614 kb on - strandat 1509.614 kb on - strandat 1509.614 kb on - strandat 1509.614 kb on - strandat 1509.614 kb on - strandat 1509.614 kb on - strandat 1509.614 kb on - strandat 1509.614 kb on - strandat 1509.614 kb on - strandat 1509.614 kb on - strandat 1509.614 kb on - strandat 1509.637 kb on + strandat 1509.645 kb on - strandat 1509.674 kb on - strandat 1509.693 kb on - strandat 1509.703 kb on - strandat 1509.727 kb on + strandat 1509.732 kb on + strandat 1509.735 kb on - strandat 1509.740 kb on - strandat 1509.745 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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1,506,855 + -2.5
1,506,915 - +0.1
1,506,987 + -3.2
1,507,044 - -2.1
1,507,145 - -2.0
1,507,307 + B158DRAFT_1452 0.30 -1.1
1,507,315 - B158DRAFT_1452 0.31 -0.8
1,507,315 - B158DRAFT_1452 0.31 -2.5
1,507,382 + B158DRAFT_1452 0.40 -1.1
1,507,464 - B158DRAFT_1452 0.51 -1.0
1,507,466 + B158DRAFT_1452 0.51 -2.9
1,507,534 + B158DRAFT_1452 0.60 -0.9
1,507,654 - B158DRAFT_1452 0.76 -2.7
1,507,801 - -1.3
1,508,247 - B158DRAFT_1453 0.44 -3.0
1,508,294 - B158DRAFT_1453 0.49 -0.3
1,508,409 - B158DRAFT_1453 0.62 -2.3
1,508,453 - B158DRAFT_1453 0.67 -1.4
1,508,628 - B158DRAFT_1453 0.85 -1.0
1,508,643 - B158DRAFT_1453 0.87 -2.5
1,508,745 - +0.3
1,508,882 + -0.6
1,508,898 + -1.0
1,508,906 - +0.3
1,508,949 + B158DRAFT_1454 0.15 +0.6
1,508,957 - B158DRAFT_1454 0.16 -0.3
1,509,004 + B158DRAFT_1454 0.22 +0.0
1,509,024 - B158DRAFT_1454 0.25 -0.8
1,509,139 + B158DRAFT_1454 0.39 -0.1
1,509,160 - B158DRAFT_1454 0.42 -0.4
1,509,252 - B158DRAFT_1454 0.53 -0.2
1,509,323 - B158DRAFT_1454 0.62 +0.2
1,509,350 + B158DRAFT_1454 0.65 +0.2
1,509,419 + B158DRAFT_1454 0.74 -0.7
1,509,476 - B158DRAFT_1454 0.81 -0.2
1,509,490 + B158DRAFT_1454 0.83 +0.1
1,509,490 + B158DRAFT_1454 0.83 +0.4
1,509,498 - B158DRAFT_1454 0.84 +0.2
1,509,498 - B158DRAFT_1454 0.84 +0.0
1,509,498 - B158DRAFT_1454 0.84 +0.2
1,509,498 - B158DRAFT_1454 0.84 +0.4
1,509,500 + B158DRAFT_1454 0.84 +0.3
1,509,500 + B158DRAFT_1454 0.84 +0.2
1,509,508 - B158DRAFT_1454 0.85 +0.7
1,509,606 + -0.6
1,509,606 + +0.5
1,509,606 + -0.2
1,509,606 + -0.2
1,509,606 + +0.9
1,509,606 + -0.5
1,509,606 + +0.4
1,509,606 + +0.3
1,509,606 + +0.5
1,509,606 + +0.4
1,509,606 + -0.5
1,509,606 + -0.2
1,509,606 + -0.3
1,509,614 - -0.1
1,509,614 - -0.1
1,509,614 - -1.2
1,509,614 - -0.4
1,509,614 - +0.5
1,509,614 - +0.2
1,509,614 - +0.3
1,509,614 - +0.1
1,509,614 - +0.0
1,509,614 - +0.2
1,509,614 - -0.1
1,509,614 - +0.3
1,509,637 + -0.1
1,509,645 - +0.1
1,509,674 - +0.4
1,509,693 - +0.0
1,509,703 - +0.3
1,509,727 + +0.4
1,509,732 + +0.6
1,509,735 - -0.5
1,509,740 - -0.0
1,509,745 - -0.3

Or see this region's nucleotide sequence