Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1393

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1390 and B158DRAFT_1391 are separated by 10 nucleotidesB158DRAFT_1391 and B158DRAFT_1392 are separated by 9 nucleotidesB158DRAFT_1392 and B158DRAFT_1393 are separated by 5 nucleotidesB158DRAFT_1393 and B158DRAFT_1394 are separated by 137 nucleotides B158DRAFT_1390: B158DRAFT_1390 - sulfur relay protein, TusE/DsrC/DsvC family, at 1,435,500 to 1,435,826 _1390 B158DRAFT_1391: B158DRAFT_1391 - sulfur relay protein TusB/DsrH, at 1,435,837 to 1,436,109 _1391 B158DRAFT_1392: B158DRAFT_1392 - sulfur relay protein TusC/DsrF, at 1,436,119 to 1,436,484 _1392 B158DRAFT_1393: B158DRAFT_1393 - sulfur relay protein TusD/DsrE, at 1,436,490 to 1,436,882 _1393 B158DRAFT_1394: B158DRAFT_1394 - Peptidase family M49., at 1,437,020 to 1,438,753 _1394 Position (kb) 1436 1437Strain fitness (log2 ratio) -1 0 1 2at 1435.499 kb on + strandat 1436.117 kb on - strandat 1436.915 kb on - strandat 1436.915 kb on - strandat 1436.915 kb on - strandat 1436.915 kb on - strandat 1436.915 kb on - strandat 1436.930 kb on - strandat 1436.947 kb on - strandat 1437.006 kb on + strandat 1437.022 kb on + strandat 1437.047 kb on - strandat 1437.047 kb on - strandat 1437.235 kb on + strand, within B158DRAFT_1394at 1437.236 kb on - strand, within B158DRAFT_1394at 1437.345 kb on + strand, within B158DRAFT_1394at 1437.345 kb on + strand, within B158DRAFT_1394at 1437.345 kb on + strand, within B158DRAFT_1394at 1437.348 kb on - strand, within B158DRAFT_1394at 1437.353 kb on - strand, within B158DRAFT_1394at 1437.353 kb on - strand, within B158DRAFT_1394at 1437.358 kb on - strand, within B158DRAFT_1394at 1437.383 kb on - strand, within B158DRAFT_1394at 1437.442 kb on - strand, within B158DRAFT_1394at 1437.461 kb on - strand, within B158DRAFT_1394at 1437.559 kb on + strand, within B158DRAFT_1394at 1437.601 kb on - strand, within B158DRAFT_1394at 1437.693 kb on + strand, within B158DRAFT_1394at 1437.727 kb on + strand, within B158DRAFT_1394at 1437.741 kb on + strand, within B158DRAFT_1394at 1437.763 kb on + strand, within B158DRAFT_1394at 1437.766 kb on - strand, within B158DRAFT_1394at 1437.766 kb on - strand, within B158DRAFT_1394at 1437.768 kb on + strand, within B158DRAFT_1394at 1437.810 kb on - strand, within B158DRAFT_1394at 1437.827 kb on + strand, within B158DRAFT_1394at 1437.835 kb on - strand, within B158DRAFT_1394at 1437.850 kb on - strand, within B158DRAFT_1394

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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1,435,499 + -0.4
1,436,117 - +0.0
1,436,915 - +0.6
1,436,915 - -0.4
1,436,915 - +1.1
1,436,915 - +0.5
1,436,915 - +2.1
1,436,930 - -1.3
1,436,947 - -1.0
1,437,006 + -0.5
1,437,022 + -0.1
1,437,047 - -0.3
1,437,047 - -0.1
1,437,235 + B158DRAFT_1394 0.12 -0.6
1,437,236 - B158DRAFT_1394 0.12 -0.1
1,437,345 + B158DRAFT_1394 0.19 -0.2
1,437,345 + B158DRAFT_1394 0.19 -0.7
1,437,345 + B158DRAFT_1394 0.19 -0.1
1,437,348 - B158DRAFT_1394 0.19 -0.3
1,437,353 - B158DRAFT_1394 0.19 -0.4
1,437,353 - B158DRAFT_1394 0.19 -1.0
1,437,358 - B158DRAFT_1394 0.19 -0.0
1,437,383 - B158DRAFT_1394 0.21 -0.3
1,437,442 - B158DRAFT_1394 0.24 -0.1
1,437,461 - B158DRAFT_1394 0.25 -0.0
1,437,559 + B158DRAFT_1394 0.31 +0.0
1,437,601 - B158DRAFT_1394 0.34 +0.1
1,437,693 + B158DRAFT_1394 0.39 +0.1
1,437,727 + B158DRAFT_1394 0.41 -0.9
1,437,741 + B158DRAFT_1394 0.42 -0.1
1,437,763 + B158DRAFT_1394 0.43 -0.3
1,437,766 - B158DRAFT_1394 0.43 +0.0
1,437,766 - B158DRAFT_1394 0.43 -0.3
1,437,768 + B158DRAFT_1394 0.43 +0.1
1,437,810 - B158DRAFT_1394 0.46 -0.9
1,437,827 + B158DRAFT_1394 0.47 -0.8
1,437,835 - B158DRAFT_1394 0.47 +0.1
1,437,850 - B158DRAFT_1394 0.48 -0.7

Or see this region's nucleotide sequence