Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1336

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1334 and B158DRAFT_1335 are separated by 88 nucleotidesB158DRAFT_1335 and B158DRAFT_1336 are separated by 35 nucleotidesB158DRAFT_1336 and B158DRAFT_1337 are separated by 141 nucleotides B158DRAFT_1334: B158DRAFT_1334 - component of chlorite stress sensing system with PGA1_c21010 (DUF692) (from data), at 1,375,254 to 1,376,039 _1334 B158DRAFT_1335: B158DRAFT_1335 - Surface lipoprotein, at 1,376,128 to 1,376,856 _1335 B158DRAFT_1336: B158DRAFT_1336 - 5'-nucleotidase, at 1,376,892 to 1,377,803 _1336 B158DRAFT_1337: B158DRAFT_1337 - Imidazolonepropionase and related amidohydrolases, at 1,377,945 to 1,379,492 _1337 Position (kb) 1376 1377 1378Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 1376.003 kb on + strandat 1376.035 kb on - strandat 1376.048 kb on - strandat 1376.126 kb on - strandat 1376.161 kb on + strandat 1376.169 kb on - strandat 1376.195 kb on + strandat 1376.221 kb on + strand, within B158DRAFT_1335at 1376.242 kb on - strand, within B158DRAFT_1335at 1376.283 kb on + strand, within B158DRAFT_1335at 1376.305 kb on + strand, within B158DRAFT_1335at 1376.306 kb on + strand, within B158DRAFT_1335at 1376.306 kb on + strand, within B158DRAFT_1335at 1376.314 kb on - strand, within B158DRAFT_1335at 1376.435 kb on + strand, within B158DRAFT_1335at 1376.435 kb on + strand, within B158DRAFT_1335at 1376.440 kb on + strand, within B158DRAFT_1335at 1376.443 kb on - strand, within B158DRAFT_1335at 1376.448 kb on - strand, within B158DRAFT_1335at 1376.516 kb on + strand, within B158DRAFT_1335at 1376.517 kb on - strand, within B158DRAFT_1335at 1376.594 kb on - strand, within B158DRAFT_1335at 1376.617 kb on + strand, within B158DRAFT_1335at 1376.617 kb on + strand, within B158DRAFT_1335at 1376.625 kb on - strand, within B158DRAFT_1335at 1376.625 kb on - strand, within B158DRAFT_1335at 1376.625 kb on - strand, within B158DRAFT_1335at 1376.630 kb on - strand, within B158DRAFT_1335at 1376.630 kb on - strand, within B158DRAFT_1335at 1376.630 kb on - strand, within B158DRAFT_1335at 1376.664 kb on + strand, within B158DRAFT_1335at 1376.674 kb on - strand, within B158DRAFT_1335at 1376.735 kb on + strand, within B158DRAFT_1335at 1376.762 kb on - strand, within B158DRAFT_1335at 1376.850 kb on + strandat 1376.867 kb on + strandat 1376.918 kb on + strandat 1376.926 kb on - strandat 1376.938 kb on - strandat 1376.995 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on - strand, within B158DRAFT_1336at 1377.040 kb on - strand, within B158DRAFT_1336at 1377.040 kb on - strand, within B158DRAFT_1336at 1377.040 kb on - strand, within B158DRAFT_1336at 1377.040 kb on - strand, within B158DRAFT_1336at 1377.040 kb on - strand, within B158DRAFT_1336at 1377.040 kb on - strand, within B158DRAFT_1336at 1377.040 kb on - strand, within B158DRAFT_1336at 1377.201 kb on + strand, within B158DRAFT_1336at 1377.201 kb on + strand, within B158DRAFT_1336at 1377.201 kb on + strand, within B158DRAFT_1336at 1377.209 kb on - strand, within B158DRAFT_1336at 1377.209 kb on - strand, within B158DRAFT_1336at 1377.209 kb on - strand, within B158DRAFT_1336at 1377.209 kb on - strand, within B158DRAFT_1336at 1377.209 kb on - strand, within B158DRAFT_1336at 1377.228 kb on - strand, within B158DRAFT_1336at 1377.274 kb on + strand, within B158DRAFT_1336at 1377.403 kb on + strand, within B158DRAFT_1336at 1377.424 kb on + strand, within B158DRAFT_1336at 1377.432 kb on - strand, within B158DRAFT_1336at 1377.432 kb on - strand, within B158DRAFT_1336at 1377.449 kb on + strand, within B158DRAFT_1336at 1377.465 kb on + strand, within B158DRAFT_1336at 1377.467 kb on - strand, within B158DRAFT_1336at 1377.473 kb on - strand, within B158DRAFT_1336at 1377.474 kb on + strand, within B158DRAFT_1336at 1377.474 kb on + strand, within B158DRAFT_1336at 1377.482 kb on - strand, within B158DRAFT_1336at 1377.625 kb on + strand, within B158DRAFT_1336at 1377.630 kb on - strand, within B158DRAFT_1336at 1377.645 kb on + strand, within B158DRAFT_1336at 1377.668 kb on - strand, within B158DRAFT_1336at 1377.688 kb on + strand, within B158DRAFT_1336at 1377.694 kb on + strand, within B158DRAFT_1336at 1377.732 kb on - strandat 1377.734 kb on - strandat 1377.823 kb on + strandat 1377.823 kb on + strandat 1377.824 kb on - strandat 1377.831 kb on - strandat 1377.831 kb on - strandat 1377.871 kb on + strandat 1378.048 kb on + strandat 1378.048 kb on + strandat 1378.048 kb on + strandat 1378.056 kb on - strandat 1378.056 kb on - strandat 1378.056 kb on - strandat 1378.083 kb on + strandat 1378.087 kb on + strandat 1378.092 kb on + strandat 1378.100 kb on - strand, within B158DRAFT_1337at 1378.190 kb on + strand, within B158DRAFT_1337at 1378.190 kb on + strand, within B158DRAFT_1337at 1378.190 kb on + strand, within B158DRAFT_1337at 1378.190 kb on + strand, within B158DRAFT_1337at 1378.190 kb on + strand, within B158DRAFT_1337at 1378.190 kb on + strand, within B158DRAFT_1337at 1378.190 kb on + strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.198 kb on - strand, within B158DRAFT_1337at 1378.282 kb on + strand, within B158DRAFT_1337at 1378.325 kb on + strand, within B158DRAFT_1337at 1378.326 kb on + strand, within B158DRAFT_1337at 1378.333 kb on + strand, within B158DRAFT_1337at 1378.368 kb on + strand, within B158DRAFT_1337at 1378.389 kb on - strand, within B158DRAFT_1337at 1378.404 kb on - strand, within B158DRAFT_1337at 1378.449 kb on - strand, within B158DRAFT_1337at 1378.499 kb on - strand, within B158DRAFT_1337at 1378.499 kb on - strand, within B158DRAFT_1337at 1378.508 kb on - strand, within B158DRAFT_1337at 1378.510 kb on - strand, within B158DRAFT_1337at 1378.526 kb on - strand, within B158DRAFT_1337at 1378.561 kb on - strand, within B158DRAFT_1337at 1378.565 kb on + strand, within B158DRAFT_1337at 1378.576 kb on + strand, within B158DRAFT_1337at 1378.635 kb on - strand, within B158DRAFT_1337at 1378.652 kb on + strand, within B158DRAFT_1337at 1378.671 kb on + strand, within B158DRAFT_1337at 1378.686 kb on - strand, within B158DRAFT_1337at 1378.710 kb on + strand, within B158DRAFT_1337at 1378.785 kb on + strand, within B158DRAFT_1337at 1378.803 kb on - strand, within B158DRAFT_1337

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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1,376,003 + -1.3
1,376,035 - -0.2
1,376,048 - -0.6
1,376,126 - -2.9
1,376,161 + -3.8
1,376,169 - -3.2
1,376,195 + -1.6
1,376,221 + B158DRAFT_1335 0.13 -3.4
1,376,242 - B158DRAFT_1335 0.16 -2.1
1,376,283 + B158DRAFT_1335 0.21 -3.6
1,376,305 + B158DRAFT_1335 0.24 -2.8
1,376,306 + B158DRAFT_1335 0.24 -1.9
1,376,306 + B158DRAFT_1335 0.24 -3.2
1,376,314 - B158DRAFT_1335 0.26 -2.3
1,376,435 + B158DRAFT_1335 0.42 -3.1
1,376,435 + B158DRAFT_1335 0.42 -2.8
1,376,440 + B158DRAFT_1335 0.43 -3.8
1,376,443 - B158DRAFT_1335 0.43 -4.0
1,376,448 - B158DRAFT_1335 0.44 -1.9
1,376,516 + B158DRAFT_1335 0.53 -3.2
1,376,517 - B158DRAFT_1335 0.53 -3.8
1,376,594 - B158DRAFT_1335 0.64 -3.3
1,376,617 + B158DRAFT_1335 0.67 -1.9
1,376,617 + B158DRAFT_1335 0.67 -1.6
1,376,625 - B158DRAFT_1335 0.68 -2.0
1,376,625 - B158DRAFT_1335 0.68 -2.1
1,376,625 - B158DRAFT_1335 0.68 -3.2
1,376,630 - B158DRAFT_1335 0.69 -1.3
1,376,630 - B158DRAFT_1335 0.69 -2.1
1,376,630 - B158DRAFT_1335 0.69 -2.9
1,376,664 + B158DRAFT_1335 0.74 -3.7
1,376,674 - B158DRAFT_1335 0.75 -4.8
1,376,735 + B158DRAFT_1335 0.83 -2.6
1,376,762 - B158DRAFT_1335 0.87 -2.3
1,376,850 + +0.0
1,376,867 + -0.0
1,376,918 + -0.6
1,376,926 - +0.5
1,376,938 - -0.8
1,376,995 + B158DRAFT_1336 0.11 -0.4
1,377,032 + B158DRAFT_1336 0.15 -0.1
1,377,032 + B158DRAFT_1336 0.15 +0.2
1,377,032 + B158DRAFT_1336 0.15 +0.0
1,377,032 + B158DRAFT_1336 0.15 +0.1
1,377,032 + B158DRAFT_1336 0.15 -0.5
1,377,032 + B158DRAFT_1336 0.15 -0.4
1,377,032 + B158DRAFT_1336 0.15 -0.3
1,377,032 + B158DRAFT_1336 0.15 -0.3
1,377,032 + B158DRAFT_1336 0.15 -1.3
1,377,032 - B158DRAFT_1336 0.15 -0.4
1,377,040 - B158DRAFT_1336 0.16 -0.6
1,377,040 - B158DRAFT_1336 0.16 -0.5
1,377,040 - B158DRAFT_1336 0.16 -0.4
1,377,040 - B158DRAFT_1336 0.16 -0.6
1,377,040 - B158DRAFT_1336 0.16 +0.1
1,377,040 - B158DRAFT_1336 0.16 -0.1
1,377,040 - B158DRAFT_1336 0.16 +0.0
1,377,201 + B158DRAFT_1336 0.34 +0.2
1,377,201 + B158DRAFT_1336 0.34 +0.5
1,377,201 + B158DRAFT_1336 0.34 -0.6
1,377,209 - B158DRAFT_1336 0.35 +0.6
1,377,209 - B158DRAFT_1336 0.35 +0.2
1,377,209 - B158DRAFT_1336 0.35 +0.0
1,377,209 - B158DRAFT_1336 0.35 -0.2
1,377,209 - B158DRAFT_1336 0.35 -0.2
1,377,228 - B158DRAFT_1336 0.37 +0.2
1,377,274 + B158DRAFT_1336 0.42 -0.1
1,377,403 + B158DRAFT_1336 0.56 -0.3
1,377,424 + B158DRAFT_1336 0.58 -0.1
1,377,432 - B158DRAFT_1336 0.59 +0.0
1,377,432 - B158DRAFT_1336 0.59 -0.2
1,377,449 + B158DRAFT_1336 0.61 -1.1
1,377,465 + B158DRAFT_1336 0.63 -0.3
1,377,467 - B158DRAFT_1336 0.63 +0.2
1,377,473 - B158DRAFT_1336 0.64 +1.0
1,377,474 + B158DRAFT_1336 0.64 -0.2
1,377,474 + B158DRAFT_1336 0.64 +0.1
1,377,482 - B158DRAFT_1336 0.65 -0.3
1,377,625 + B158DRAFT_1336 0.80 +0.0
1,377,630 - B158DRAFT_1336 0.81 -0.5
1,377,645 + B158DRAFT_1336 0.83 +0.2
1,377,668 - B158DRAFT_1336 0.85 +0.3
1,377,688 + B158DRAFT_1336 0.87 +0.2
1,377,694 + B158DRAFT_1336 0.88 +0.4
1,377,732 - +0.5
1,377,734 - +0.1
1,377,823 + +0.2
1,377,823 + +0.1
1,377,824 - -1.0
1,377,831 - +0.7
1,377,831 - +0.6
1,377,871 + +0.7
1,378,048 + -1.1
1,378,048 + -1.2
1,378,048 + +0.2
1,378,056 - -0.1
1,378,056 - +0.2
1,378,056 - +0.4
1,378,083 + -0.1
1,378,087 + +0.2
1,378,092 + +0.3
1,378,100 - B158DRAFT_1337 0.10 -0.0
1,378,190 + B158DRAFT_1337 0.16 -0.3
1,378,190 + B158DRAFT_1337 0.16 +0.0
1,378,190 + B158DRAFT_1337 0.16 -0.1
1,378,190 + B158DRAFT_1337 0.16 -0.2
1,378,190 + B158DRAFT_1337 0.16 +0.0
1,378,190 + B158DRAFT_1337 0.16 -1.5
1,378,190 + B158DRAFT_1337 0.16 +0.0
1,378,198 - B158DRAFT_1337 0.16 +0.1
1,378,198 - B158DRAFT_1337 0.16 +0.8
1,378,198 - B158DRAFT_1337 0.16 -0.0
1,378,198 - B158DRAFT_1337 0.16 -0.8
1,378,198 - B158DRAFT_1337 0.16 -0.9
1,378,198 - B158DRAFT_1337 0.16 +0.1
1,378,198 - B158DRAFT_1337 0.16 +0.2
1,378,198 - B158DRAFT_1337 0.16 -0.1
1,378,198 - B158DRAFT_1337 0.16 -0.4
1,378,198 - B158DRAFT_1337 0.16 -0.2
1,378,198 - B158DRAFT_1337 0.16 +0.5
1,378,198 - B158DRAFT_1337 0.16 +0.3
1,378,198 - B158DRAFT_1337 0.16 +0.5
1,378,198 - B158DRAFT_1337 0.16 +0.4
1,378,198 - B158DRAFT_1337 0.16 -0.1
1,378,198 - B158DRAFT_1337 0.16 +0.3
1,378,282 + B158DRAFT_1337 0.22 -0.2
1,378,325 + B158DRAFT_1337 0.25 -1.2
1,378,326 + B158DRAFT_1337 0.25 -0.4
1,378,333 + B158DRAFT_1337 0.25 +0.4
1,378,368 + B158DRAFT_1337 0.27 -0.6
1,378,389 - B158DRAFT_1337 0.29 -0.1
1,378,404 - B158DRAFT_1337 0.30 -0.7
1,378,449 - B158DRAFT_1337 0.33 +0.1
1,378,499 - B158DRAFT_1337 0.36 -0.3
1,378,499 - B158DRAFT_1337 0.36 +0.0
1,378,508 - B158DRAFT_1337 0.36 -0.1
1,378,510 - B158DRAFT_1337 0.36 +0.0
1,378,526 - B158DRAFT_1337 0.38 -0.1
1,378,561 - B158DRAFT_1337 0.40 +0.3
1,378,565 + B158DRAFT_1337 0.40 +0.0
1,378,576 + B158DRAFT_1337 0.41 +0.1
1,378,635 - B158DRAFT_1337 0.45 -0.7
1,378,652 + B158DRAFT_1337 0.46 +0.2
1,378,671 + B158DRAFT_1337 0.47 +0.2
1,378,686 - B158DRAFT_1337 0.48 -0.1
1,378,710 + B158DRAFT_1337 0.49 -0.2
1,378,785 + B158DRAFT_1337 0.54 -0.3
1,378,803 - B158DRAFT_1337 0.55 +0.4

Or see this region's nucleotide sequence