Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1327

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1325 and B158DRAFT_1326 are separated by 3 nucleotidesB158DRAFT_1326 and B158DRAFT_1327 are separated by 6 nucleotidesB158DRAFT_1327 and B158DRAFT_1328 are separated by 11 nucleotides B158DRAFT_1325: B158DRAFT_1325 - heme exporter protein CcmC, at 1,368,295 to 1,369,068 _1325 B158DRAFT_1326: B158DRAFT_1326 - heme exporter protein CcmD, at 1,369,072 to 1,369,296 _1326 B158DRAFT_1327: B158DRAFT_1327 - Cytochrome c-type biogenesis protein CcmE, at 1,369,303 to 1,369,782 _1327 B158DRAFT_1328: B158DRAFT_1328 - c-type cytochrome biogenesis protein CcmF, at 1,369,794 to 1,371,782 _1328 Position (kb) 1369 1370Strain fitness (log2 ratio) -2 -1 0 1at 1368.414 kb on + strand, within B158DRAFT_1325at 1368.422 kb on - strand, within B158DRAFT_1325at 1368.448 kb on + strand, within B158DRAFT_1325at 1368.639 kb on - strand, within B158DRAFT_1325at 1368.659 kb on - strand, within B158DRAFT_1325at 1368.699 kb on - strand, within B158DRAFT_1325at 1368.765 kb on + strand, within B158DRAFT_1325at 1368.773 kb on - strand, within B158DRAFT_1325at 1368.798 kb on - strand, within B158DRAFT_1325at 1368.798 kb on - strand, within B158DRAFT_1325at 1369.015 kb on + strandat 1369.056 kb on + strandat 1369.248 kb on + strand, within B158DRAFT_1326at 1369.248 kb on + strand, within B158DRAFT_1326at 1369.251 kb on - strand, within B158DRAFT_1326at 1369.359 kb on + strand, within B158DRAFT_1327at 1369.367 kb on - strand, within B158DRAFT_1327at 1369.373 kb on + strand, within B158DRAFT_1327at 1369.410 kb on + strand, within B158DRAFT_1327at 1369.410 kb on + strand, within B158DRAFT_1327at 1369.447 kb on + strand, within B158DRAFT_1327at 1369.490 kb on + strand, within B158DRAFT_1327at 1369.552 kb on - strand, within B158DRAFT_1327at 1370.206 kb on + strand, within B158DRAFT_1328at 1370.206 kb on + strand, within B158DRAFT_1328at 1370.221 kb on + strand, within B158DRAFT_1328at 1370.221 kb on + strand, within B158DRAFT_1328at 1370.229 kb on - strand, within B158DRAFT_1328at 1370.293 kb on + strand, within B158DRAFT_1328at 1370.393 kb on + strand, within B158DRAFT_1328at 1370.463 kb on + strand, within B158DRAFT_1328at 1370.546 kb on + strand, within B158DRAFT_1328at 1370.551 kb on + strand, within B158DRAFT_1328at 1370.622 kb on + strand, within B158DRAFT_1328at 1370.657 kb on + strand, within B158DRAFT_1328at 1370.658 kb on + strand, within B158DRAFT_1328

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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1,368,414 + B158DRAFT_1325 0.15 -1.4
1,368,422 - B158DRAFT_1325 0.16 -1.1
1,368,448 + B158DRAFT_1325 0.20 -0.3
1,368,639 - B158DRAFT_1325 0.44 -0.7
1,368,659 - B158DRAFT_1325 0.47 -2.1
1,368,699 - B158DRAFT_1325 0.52 -1.5
1,368,765 + B158DRAFT_1325 0.61 -1.2
1,368,773 - B158DRAFT_1325 0.62 +0.0
1,368,798 - B158DRAFT_1325 0.65 -0.8
1,368,798 - B158DRAFT_1325 0.65 -0.5
1,369,015 + -0.3
1,369,056 + +0.8
1,369,248 + B158DRAFT_1326 0.78 -0.5
1,369,248 + B158DRAFT_1326 0.78 -0.8
1,369,251 - B158DRAFT_1326 0.80 -1.3
1,369,359 + B158DRAFT_1327 0.12 -1.4
1,369,367 - B158DRAFT_1327 0.13 -0.7
1,369,373 + B158DRAFT_1327 0.15 -1.0
1,369,410 + B158DRAFT_1327 0.22 -1.7
1,369,410 + B158DRAFT_1327 0.22 -1.2
1,369,447 + B158DRAFT_1327 0.30 -0.9
1,369,490 + B158DRAFT_1327 0.39 -1.6
1,369,552 - B158DRAFT_1327 0.52 -0.4
1,370,206 + B158DRAFT_1328 0.21 -0.7
1,370,206 + B158DRAFT_1328 0.21 -0.2
1,370,221 + B158DRAFT_1328 0.21 -1.8
1,370,221 + B158DRAFT_1328 0.21 -1.9
1,370,229 - B158DRAFT_1328 0.22 +0.4
1,370,293 + B158DRAFT_1328 0.25 -0.5
1,370,393 + B158DRAFT_1328 0.30 -0.4
1,370,463 + B158DRAFT_1328 0.34 -0.2
1,370,546 + B158DRAFT_1328 0.38 -0.0
1,370,551 + B158DRAFT_1328 0.38 -2.0
1,370,622 + B158DRAFT_1328 0.42 +0.9
1,370,657 + B158DRAFT_1328 0.43 -0.9
1,370,658 + B158DRAFT_1328 0.43 -0.5

Or see this region's nucleotide sequence