Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1325 and B158DRAFT_1326 are separated by 3 nucleotides B158DRAFT_1326 and B158DRAFT_1327 are separated by 6 nucleotides B158DRAFT_1327 and B158DRAFT_1328 are separated by 11 nucleotides
B158DRAFT_1325: B158DRAFT_1325 - heme exporter protein CcmC, at 1,368,295 to 1,369,068
_1325
B158DRAFT_1326: B158DRAFT_1326 - heme exporter protein CcmD, at 1,369,072 to 1,369,296
_1326
B158DRAFT_1327: B158DRAFT_1327 - Cytochrome c-type biogenesis protein CcmE, at 1,369,303 to 1,369,782
_1327
B158DRAFT_1328: B158DRAFT_1328 - c-type cytochrome biogenesis protein CcmF, at 1,369,794 to 1,371,782
_1328
Position (kb)
1369
1370 Strain fitness (log2 ratio)
-2
-1
0
1 at 1368.414 kb on + strand, within B158DRAFT_1325 at 1368.422 kb on - strand, within B158DRAFT_1325 at 1368.448 kb on + strand, within B158DRAFT_1325 at 1368.639 kb on - strand, within B158DRAFT_1325 at 1368.659 kb on - strand, within B158DRAFT_1325 at 1368.699 kb on - strand, within B158DRAFT_1325 at 1368.765 kb on + strand, within B158DRAFT_1325 at 1368.773 kb on - strand, within B158DRAFT_1325 at 1368.798 kb on - strand, within B158DRAFT_1325 at 1368.798 kb on - strand, within B158DRAFT_1325 at 1369.015 kb on + strand at 1369.056 kb on + strand at 1369.248 kb on + strand, within B158DRAFT_1326 at 1369.248 kb on + strand, within B158DRAFT_1326 at 1369.251 kb on - strand, within B158DRAFT_1326 at 1369.359 kb on + strand, within B158DRAFT_1327 at 1369.367 kb on - strand, within B158DRAFT_1327 at 1369.373 kb on + strand, within B158DRAFT_1327 at 1369.410 kb on + strand, within B158DRAFT_1327 at 1369.410 kb on + strand, within B158DRAFT_1327 at 1369.447 kb on + strand, within B158DRAFT_1327 at 1369.490 kb on + strand, within B158DRAFT_1327 at 1369.552 kb on - strand, within B158DRAFT_1327 at 1370.206 kb on + strand, within B158DRAFT_1328 at 1370.206 kb on + strand, within B158DRAFT_1328 at 1370.221 kb on + strand, within B158DRAFT_1328 at 1370.221 kb on + strand, within B158DRAFT_1328 at 1370.229 kb on - strand, within B158DRAFT_1328 at 1370.293 kb on + strand, within B158DRAFT_1328 at 1370.393 kb on + strand, within B158DRAFT_1328 at 1370.463 kb on + strand, within B158DRAFT_1328 at 1370.546 kb on + strand, within B158DRAFT_1328 at 1370.551 kb on + strand, within B158DRAFT_1328 at 1370.622 kb on + strand, within B158DRAFT_1328 at 1370.657 kb on + strand, within B158DRAFT_1328 at 1370.658 kb on + strand, within B158DRAFT_1328
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 1,368,414 + B158DRAFT_1325 0.15 -1.4 1,368,422 - B158DRAFT_1325 0.16 -1.1 1,368,448 + B158DRAFT_1325 0.20 -0.3 1,368,639 - B158DRAFT_1325 0.44 -0.7 1,368,659 - B158DRAFT_1325 0.47 -2.1 1,368,699 - B158DRAFT_1325 0.52 -1.5 1,368,765 + B158DRAFT_1325 0.61 -1.2 1,368,773 - B158DRAFT_1325 0.62 +0.0 1,368,798 - B158DRAFT_1325 0.65 -0.8 1,368,798 - B158DRAFT_1325 0.65 -0.5 1,369,015 + -0.3 1,369,056 + +0.8 1,369,248 + B158DRAFT_1326 0.78 -0.5 1,369,248 + B158DRAFT_1326 0.78 -0.8 1,369,251 - B158DRAFT_1326 0.80 -1.3 1,369,359 + B158DRAFT_1327 0.12 -1.4 1,369,367 - B158DRAFT_1327 0.13 -0.7 1,369,373 + B158DRAFT_1327 0.15 -1.0 1,369,410 + B158DRAFT_1327 0.22 -1.7 1,369,410 + B158DRAFT_1327 0.22 -1.2 1,369,447 + B158DRAFT_1327 0.30 -0.9 1,369,490 + B158DRAFT_1327 0.39 -1.6 1,369,552 - B158DRAFT_1327 0.52 -0.4 1,370,206 + B158DRAFT_1328 0.21 -0.7 1,370,206 + B158DRAFT_1328 0.21 -0.2 1,370,221 + B158DRAFT_1328 0.21 -1.8 1,370,221 + B158DRAFT_1328 0.21 -1.9 1,370,229 - B158DRAFT_1328 0.22 +0.4 1,370,293 + B158DRAFT_1328 0.25 -0.5 1,370,393 + B158DRAFT_1328 0.30 -0.4 1,370,463 + B158DRAFT_1328 0.34 -0.2 1,370,546 + B158DRAFT_1328 0.38 -0.0 1,370,551 + B158DRAFT_1328 0.38 -2.0 1,370,622 + B158DRAFT_1328 0.42 +0.9 1,370,657 + B158DRAFT_1328 0.43 -0.9 1,370,658 + B158DRAFT_1328 0.43 -0.5
Or see this region's nucleotide sequence