Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1306 and B158DRAFT_1307 are separated by 9 nucleotides B158DRAFT_1307 and B158DRAFT_1308 are separated by 97 nucleotides B158DRAFT_1308 and B158DRAFT_1309 overlap by 4 nucleotides B158DRAFT_1309 and B158DRAFT_1310 are separated by 248 nucleotides B158DRAFT_1310 and B158DRAFT_1311 are separated by 88 nucleotides
B158DRAFT_1306: B158DRAFT_1306 - Uncharacterized conserved protein, at 1,352,845 to 1,354,737
_1306
B158DRAFT_1307: B158DRAFT_1307 - GTP cyclohydrolase I, at 1,354,747 to 1,355,304
_1307
B158DRAFT_1308: B158DRAFT_1308 - 4-phosphoerythronate dehydrogenase (EC 1.1.1.290), at 1,355,402 to 1,356,487
_1308
B158DRAFT_1309: B158DRAFT_1309 - hypothetical protein, at 1,356,484 to 1,356,720
_1309
B158DRAFT_1310: B158DRAFT_1310 - Cold shock proteins, at 1,356,969 to 1,357,178
_1310
B158DRAFT_1311: B158DRAFT_1311 - Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5), at 1,357,267 to 1,357,902
_1311
Position (kb)
1355
1356
1357 Strain fitness (log2 ratio)
-2
-1
0
1 at 1354.407 kb on + strand, within B158DRAFT_1306 at 1354.415 kb on - strand, within B158DRAFT_1306 at 1354.415 kb on - strand, within B158DRAFT_1306 at 1354.415 kb on - strand, within B158DRAFT_1306 at 1354.415 kb on - strand, within B158DRAFT_1306 at 1354.415 kb on - strand, within B158DRAFT_1306 at 1354.415 kb on - strand, within B158DRAFT_1306 at 1354.431 kb on - strand, within B158DRAFT_1306 at 1354.451 kb on + strand, within B158DRAFT_1306 at 1354.464 kb on + strand, within B158DRAFT_1306 at 1354.472 kb on - strand, within B158DRAFT_1306 at 1354.640 kb on - strand at 1354.645 kb on + strand at 1354.653 kb on - strand at 1354.657 kb on + strand at 1354.672 kb on - strand at 1354.744 kb on + strand at 1355.325 kb on - strand at 1356.484 kb on - strand at 1356.484 kb on - strand at 1356.509 kb on - strand, within B158DRAFT_1309 at 1356.583 kb on + strand, within B158DRAFT_1309 at 1356.583 kb on + strand, within B158DRAFT_1309 at 1356.585 kb on + strand, within B158DRAFT_1309 at 1356.603 kb on - strand, within B158DRAFT_1309 at 1356.603 kb on - strand, within B158DRAFT_1309 at 1356.661 kb on + strand, within B158DRAFT_1309 at 1356.722 kb on + strand at 1356.732 kb on + strand at 1356.732 kb on + strand at 1356.740 kb on - strand at 1356.901 kb on + strand at 1356.901 kb on + strand at 1356.901 kb on + strand at 1356.909 kb on - strand at 1356.909 kb on - strand at 1356.909 kb on - strand at 1356.909 kb on - strand at 1356.971 kb on + strand at 1356.979 kb on - strand at 1356.979 kb on - strand at 1356.979 kb on - strand at 1356.981 kb on + strand at 1357.019 kb on - strand, within B158DRAFT_1310 at 1357.040 kb on + strand, within B158DRAFT_1310 at 1357.064 kb on + strand, within B158DRAFT_1310 at 1357.200 kb on - strand at 1357.273 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 1,354,407 + B158DRAFT_1306 0.83 -0.1 1,354,415 - B158DRAFT_1306 0.83 -0.4 1,354,415 - B158DRAFT_1306 0.83 -0.1 1,354,415 - B158DRAFT_1306 0.83 -0.3 1,354,415 - B158DRAFT_1306 0.83 +0.0 1,354,415 - B158DRAFT_1306 0.83 +0.1 1,354,415 - B158DRAFT_1306 0.83 -0.6 1,354,431 - B158DRAFT_1306 0.84 -0.0 1,354,451 + B158DRAFT_1306 0.85 -0.3 1,354,464 + B158DRAFT_1306 0.86 -0.5 1,354,472 - B158DRAFT_1306 0.86 +0.4 1,354,640 - +0.6 1,354,645 + +0.1 1,354,653 - +0.2 1,354,657 + -0.1 1,354,672 - -0.1 1,354,744 + +0.3 1,355,325 - -2.0 1,356,484 - -0.4 1,356,484 - -0.3 1,356,509 - B158DRAFT_1309 0.11 +0.3 1,356,583 + B158DRAFT_1309 0.42 -0.2 1,356,583 + B158DRAFT_1309 0.42 +0.2 1,356,585 + B158DRAFT_1309 0.43 +0.5 1,356,603 - B158DRAFT_1309 0.50 +0.1 1,356,603 - B158DRAFT_1309 0.50 +0.1 1,356,661 + B158DRAFT_1309 0.75 -0.7 1,356,722 + +0.4 1,356,732 + +0.1 1,356,732 + +0.2 1,356,740 - -0.1 1,356,901 + +0.2 1,356,901 + -0.9 1,356,901 + -0.0 1,356,909 - -0.2 1,356,909 - -0.5 1,356,909 - -1.3 1,356,909 - -0.5 1,356,971 + -0.1 1,356,979 - -0.1 1,356,979 - -0.7 1,356,979 - +0.2 1,356,981 + -0.4 1,357,019 - B158DRAFT_1310 0.24 -0.5 1,357,040 + B158DRAFT_1310 0.34 -0.1 1,357,064 + B158DRAFT_1310 0.45 +0.7 1,357,200 - +0.3 1,357,273 - +0.2
Or see this region's nucleotide sequence