Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1305 and B158DRAFT_1306 are separated by 75 nucleotides B158DRAFT_1306 and B158DRAFT_1307 are separated by 9 nucleotides B158DRAFT_1307 and B158DRAFT_1308 are separated by 97 nucleotides
B158DRAFT_1305: B158DRAFT_1305 - hypothetical protein, at 1,351,972 to 1,352,769
_1305
B158DRAFT_1306: B158DRAFT_1306 - Uncharacterized conserved protein, at 1,352,845 to 1,354,737
_1306
B158DRAFT_1307: B158DRAFT_1307 - GTP cyclohydrolase I, at 1,354,747 to 1,355,304
_1307
B158DRAFT_1308: B158DRAFT_1308 - 4-phosphoerythronate dehydrogenase (EC 1.1.1.290), at 1,355,402 to 1,356,487
_1308
Position (kb)
1352
1353
1354
1355 Strain fitness (log2 ratio)
-2
-1
0
1 at 1352.090 kb on + strand, within B158DRAFT_1305 at 1352.231 kb on - strand, within B158DRAFT_1305 at 1352.317 kb on - strand, within B158DRAFT_1305 at 1352.332 kb on - strand, within B158DRAFT_1305 at 1352.395 kb on + strand, within B158DRAFT_1305 at 1352.514 kb on + strand, within B158DRAFT_1305 at 1352.522 kb on - strand, within B158DRAFT_1305 at 1352.951 kb on - strand at 1353.071 kb on - strand, within B158DRAFT_1306 at 1353.071 kb on - strand, within B158DRAFT_1306 at 1353.072 kb on + strand, within B158DRAFT_1306 at 1353.080 kb on - strand, within B158DRAFT_1306 at 1353.131 kb on - strand, within B158DRAFT_1306 at 1353.252 kb on - strand, within B158DRAFT_1306 at 1353.254 kb on + strand, within B158DRAFT_1306 at 1353.261 kb on + strand, within B158DRAFT_1306 at 1353.380 kb on - strand, within B158DRAFT_1306 at 1353.420 kb on - strand, within B158DRAFT_1306 at 1353.463 kb on - strand, within B158DRAFT_1306 at 1353.565 kb on - strand, within B158DRAFT_1306 at 1353.567 kb on + strand, within B158DRAFT_1306 at 1353.624 kb on + strand, within B158DRAFT_1306 at 1353.624 kb on + strand, within B158DRAFT_1306 at 1353.624 kb on + strand, within B158DRAFT_1306 at 1353.624 kb on + strand, within B158DRAFT_1306 at 1353.627 kb on - strand, within B158DRAFT_1306 at 1353.816 kb on + strand, within B158DRAFT_1306 at 1353.816 kb on + strand, within B158DRAFT_1306 at 1353.830 kb on - strand, within B158DRAFT_1306 at 1353.844 kb on + strand, within B158DRAFT_1306 at 1353.864 kb on - strand, within B158DRAFT_1306 at 1353.865 kb on + strand, within B158DRAFT_1306 at 1353.873 kb on - strand, within B158DRAFT_1306 at 1353.873 kb on - strand, within B158DRAFT_1306 at 1353.873 kb on - strand, within B158DRAFT_1306 at 1353.898 kb on - strand, within B158DRAFT_1306 at 1353.900 kb on + strand, within B158DRAFT_1306 at 1353.900 kb on + strand, within B158DRAFT_1306 at 1353.900 kb on + strand, within B158DRAFT_1306 at 1353.908 kb on - strand, within B158DRAFT_1306 at 1353.959 kb on + strand, within B158DRAFT_1306 at 1354.023 kb on + strand, within B158DRAFT_1306 at 1354.023 kb on + strand, within B158DRAFT_1306 at 1354.023 kb on + strand, within B158DRAFT_1306 at 1354.206 kb on + strand, within B158DRAFT_1306 at 1354.254 kb on + strand, within B158DRAFT_1306 at 1354.254 kb on + strand, within B158DRAFT_1306 at 1354.254 kb on + strand, within B158DRAFT_1306 at 1354.254 kb on + strand, within B158DRAFT_1306 at 1354.262 kb on - strand, within B158DRAFT_1306 at 1354.284 kb on + strand, within B158DRAFT_1306 at 1354.292 kb on + strand, within B158DRAFT_1306 at 1354.292 kb on + strand, within B158DRAFT_1306 at 1354.300 kb on - strand, within B158DRAFT_1306 at 1354.300 kb on - strand, within B158DRAFT_1306 at 1354.326 kb on - strand, within B158DRAFT_1306 at 1354.344 kb on + strand, within B158DRAFT_1306 at 1354.370 kb on - strand, within B158DRAFT_1306 at 1354.407 kb on + strand, within B158DRAFT_1306 at 1354.415 kb on - strand, within B158DRAFT_1306 at 1354.415 kb on - strand, within B158DRAFT_1306 at 1354.415 kb on - strand, within B158DRAFT_1306 at 1354.415 kb on - strand, within B158DRAFT_1306 at 1354.415 kb on - strand, within B158DRAFT_1306 at 1354.415 kb on - strand, within B158DRAFT_1306 at 1354.431 kb on - strand, within B158DRAFT_1306 at 1354.451 kb on + strand, within B158DRAFT_1306 at 1354.464 kb on + strand, within B158DRAFT_1306 at 1354.472 kb on - strand, within B158DRAFT_1306 at 1354.640 kb on - strand at 1354.645 kb on + strand at 1354.653 kb on - strand at 1354.657 kb on + strand at 1354.672 kb on - strand at 1354.744 kb on + strand at 1355.325 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 1,352,090 + B158DRAFT_1305 0.15 -0.2 1,352,231 - B158DRAFT_1305 0.32 -1.1 1,352,317 - B158DRAFT_1305 0.43 -1.1 1,352,332 - B158DRAFT_1305 0.45 -0.1 1,352,395 + B158DRAFT_1305 0.53 -1.3 1,352,514 + B158DRAFT_1305 0.68 -0.3 1,352,522 - B158DRAFT_1305 0.69 -0.2 1,352,951 - -0.5 1,353,071 - B158DRAFT_1306 0.12 +0.2 1,353,071 - B158DRAFT_1306 0.12 -0.2 1,353,072 + B158DRAFT_1306 0.12 +0.1 1,353,080 - B158DRAFT_1306 0.12 +0.0 1,353,131 - B158DRAFT_1306 0.15 +0.1 1,353,252 - B158DRAFT_1306 0.22 +0.2 1,353,254 + B158DRAFT_1306 0.22 +0.3 1,353,261 + B158DRAFT_1306 0.22 -0.5 1,353,380 - B158DRAFT_1306 0.28 +0.2 1,353,420 - B158DRAFT_1306 0.30 +0.3 1,353,463 - B158DRAFT_1306 0.33 +0.0 1,353,565 - B158DRAFT_1306 0.38 -0.0 1,353,567 + B158DRAFT_1306 0.38 +1.1 1,353,624 + B158DRAFT_1306 0.41 -0.0 1,353,624 + B158DRAFT_1306 0.41 -0.4 1,353,624 + B158DRAFT_1306 0.41 +0.1 1,353,624 + B158DRAFT_1306 0.41 +0.1 1,353,627 - B158DRAFT_1306 0.41 +0.7 1,353,816 + B158DRAFT_1306 0.51 -0.1 1,353,816 + B158DRAFT_1306 0.51 -0.7 1,353,830 - B158DRAFT_1306 0.52 +0.0 1,353,844 + B158DRAFT_1306 0.53 +0.5 1,353,864 - B158DRAFT_1306 0.54 -0.5 1,353,865 + B158DRAFT_1306 0.54 -0.1 1,353,873 - B158DRAFT_1306 0.54 -0.2 1,353,873 - B158DRAFT_1306 0.54 +0.3 1,353,873 - B158DRAFT_1306 0.54 -0.3 1,353,898 - B158DRAFT_1306 0.56 -0.0 1,353,900 + B158DRAFT_1306 0.56 +0.2 1,353,900 + B158DRAFT_1306 0.56 +0.4 1,353,900 + B158DRAFT_1306 0.56 +0.0 1,353,908 - B158DRAFT_1306 0.56 +0.3 1,353,959 + B158DRAFT_1306 0.59 -0.9 1,354,023 + B158DRAFT_1306 0.62 +0.9 1,354,023 + B158DRAFT_1306 0.62 +1.7 1,354,023 + B158DRAFT_1306 0.62 -2.4 1,354,206 + B158DRAFT_1306 0.72 -0.5 1,354,254 + B158DRAFT_1306 0.74 +0.3 1,354,254 + B158DRAFT_1306 0.74 +0.1 1,354,254 + B158DRAFT_1306 0.74 -0.2 1,354,254 + B158DRAFT_1306 0.74 -0.2 1,354,262 - B158DRAFT_1306 0.75 +0.1 1,354,284 + B158DRAFT_1306 0.76 -0.2 1,354,292 + B158DRAFT_1306 0.76 +1.7 1,354,292 + B158DRAFT_1306 0.76 -0.7 1,354,300 - B158DRAFT_1306 0.77 +1.2 1,354,300 - B158DRAFT_1306 0.77 -0.4 1,354,326 - B158DRAFT_1306 0.78 +0.0 1,354,344 + B158DRAFT_1306 0.79 -0.2 1,354,370 - B158DRAFT_1306 0.81 +0.4 1,354,407 + B158DRAFT_1306 0.83 -0.1 1,354,415 - B158DRAFT_1306 0.83 -0.4 1,354,415 - B158DRAFT_1306 0.83 -0.1 1,354,415 - B158DRAFT_1306 0.83 -0.3 1,354,415 - B158DRAFT_1306 0.83 +0.0 1,354,415 - B158DRAFT_1306 0.83 +0.1 1,354,415 - B158DRAFT_1306 0.83 -0.6 1,354,431 - B158DRAFT_1306 0.84 -0.0 1,354,451 + B158DRAFT_1306 0.85 -0.3 1,354,464 + B158DRAFT_1306 0.86 -0.5 1,354,472 - B158DRAFT_1306 0.86 +0.4 1,354,640 - +0.6 1,354,645 + +0.1 1,354,653 - +0.2 1,354,657 + -0.1 1,354,672 - -0.1 1,354,744 + +0.3 1,355,325 - -2.0
Or see this region's nucleotide sequence