Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1306

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1305 and B158DRAFT_1306 are separated by 75 nucleotidesB158DRAFT_1306 and B158DRAFT_1307 are separated by 9 nucleotidesB158DRAFT_1307 and B158DRAFT_1308 are separated by 97 nucleotides B158DRAFT_1305: B158DRAFT_1305 - hypothetical protein, at 1,351,972 to 1,352,769 _1305 B158DRAFT_1306: B158DRAFT_1306 - Uncharacterized conserved protein, at 1,352,845 to 1,354,737 _1306 B158DRAFT_1307: B158DRAFT_1307 - GTP cyclohydrolase I, at 1,354,747 to 1,355,304 _1307 B158DRAFT_1308: B158DRAFT_1308 - 4-phosphoerythronate dehydrogenase (EC 1.1.1.290), at 1,355,402 to 1,356,487 _1308 Position (kb) 1352 1353 1354 1355Strain fitness (log2 ratio) -2 -1 0 1at 1352.090 kb on + strand, within B158DRAFT_1305at 1352.231 kb on - strand, within B158DRAFT_1305at 1352.317 kb on - strand, within B158DRAFT_1305at 1352.332 kb on - strand, within B158DRAFT_1305at 1352.395 kb on + strand, within B158DRAFT_1305at 1352.514 kb on + strand, within B158DRAFT_1305at 1352.522 kb on - strand, within B158DRAFT_1305at 1352.951 kb on - strandat 1353.071 kb on - strand, within B158DRAFT_1306at 1353.071 kb on - strand, within B158DRAFT_1306at 1353.072 kb on + strand, within B158DRAFT_1306at 1353.080 kb on - strand, within B158DRAFT_1306at 1353.131 kb on - strand, within B158DRAFT_1306at 1353.252 kb on - strand, within B158DRAFT_1306at 1353.254 kb on + strand, within B158DRAFT_1306at 1353.261 kb on + strand, within B158DRAFT_1306at 1353.380 kb on - strand, within B158DRAFT_1306at 1353.420 kb on - strand, within B158DRAFT_1306at 1353.463 kb on - strand, within B158DRAFT_1306at 1353.565 kb on - strand, within B158DRAFT_1306at 1353.567 kb on + strand, within B158DRAFT_1306at 1353.624 kb on + strand, within B158DRAFT_1306at 1353.624 kb on + strand, within B158DRAFT_1306at 1353.624 kb on + strand, within B158DRAFT_1306at 1353.624 kb on + strand, within B158DRAFT_1306at 1353.627 kb on - strand, within B158DRAFT_1306at 1353.816 kb on + strand, within B158DRAFT_1306at 1353.816 kb on + strand, within B158DRAFT_1306at 1353.830 kb on - strand, within B158DRAFT_1306at 1353.844 kb on + strand, within B158DRAFT_1306at 1353.864 kb on - strand, within B158DRAFT_1306at 1353.865 kb on + strand, within B158DRAFT_1306at 1353.873 kb on - strand, within B158DRAFT_1306at 1353.873 kb on - strand, within B158DRAFT_1306at 1353.873 kb on - strand, within B158DRAFT_1306at 1353.898 kb on - strand, within B158DRAFT_1306at 1353.900 kb on + strand, within B158DRAFT_1306at 1353.900 kb on + strand, within B158DRAFT_1306at 1353.900 kb on + strand, within B158DRAFT_1306at 1353.908 kb on - strand, within B158DRAFT_1306at 1353.959 kb on + strand, within B158DRAFT_1306at 1354.023 kb on + strand, within B158DRAFT_1306at 1354.023 kb on + strand, within B158DRAFT_1306at 1354.023 kb on + strand, within B158DRAFT_1306at 1354.206 kb on + strand, within B158DRAFT_1306at 1354.254 kb on + strand, within B158DRAFT_1306at 1354.254 kb on + strand, within B158DRAFT_1306at 1354.254 kb on + strand, within B158DRAFT_1306at 1354.254 kb on + strand, within B158DRAFT_1306at 1354.262 kb on - strand, within B158DRAFT_1306at 1354.284 kb on + strand, within B158DRAFT_1306at 1354.292 kb on + strand, within B158DRAFT_1306at 1354.292 kb on + strand, within B158DRAFT_1306at 1354.300 kb on - strand, within B158DRAFT_1306at 1354.300 kb on - strand, within B158DRAFT_1306at 1354.326 kb on - strand, within B158DRAFT_1306at 1354.344 kb on + strand, within B158DRAFT_1306at 1354.370 kb on - strand, within B158DRAFT_1306at 1354.407 kb on + strand, within B158DRAFT_1306at 1354.415 kb on - strand, within B158DRAFT_1306at 1354.415 kb on - strand, within B158DRAFT_1306at 1354.415 kb on - strand, within B158DRAFT_1306at 1354.415 kb on - strand, within B158DRAFT_1306at 1354.415 kb on - strand, within B158DRAFT_1306at 1354.415 kb on - strand, within B158DRAFT_1306at 1354.431 kb on - strand, within B158DRAFT_1306at 1354.451 kb on + strand, within B158DRAFT_1306at 1354.464 kb on + strand, within B158DRAFT_1306at 1354.472 kb on - strand, within B158DRAFT_1306at 1354.640 kb on - strandat 1354.645 kb on + strandat 1354.653 kb on - strandat 1354.657 kb on + strandat 1354.672 kb on - strandat 1354.744 kb on + strandat 1355.325 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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1,352,090 + B158DRAFT_1305 0.15 -0.2
1,352,231 - B158DRAFT_1305 0.32 -1.1
1,352,317 - B158DRAFT_1305 0.43 -1.1
1,352,332 - B158DRAFT_1305 0.45 -0.1
1,352,395 + B158DRAFT_1305 0.53 -1.3
1,352,514 + B158DRAFT_1305 0.68 -0.3
1,352,522 - B158DRAFT_1305 0.69 -0.2
1,352,951 - -0.5
1,353,071 - B158DRAFT_1306 0.12 +0.2
1,353,071 - B158DRAFT_1306 0.12 -0.2
1,353,072 + B158DRAFT_1306 0.12 +0.1
1,353,080 - B158DRAFT_1306 0.12 +0.0
1,353,131 - B158DRAFT_1306 0.15 +0.1
1,353,252 - B158DRAFT_1306 0.22 +0.2
1,353,254 + B158DRAFT_1306 0.22 +0.3
1,353,261 + B158DRAFT_1306 0.22 -0.5
1,353,380 - B158DRAFT_1306 0.28 +0.2
1,353,420 - B158DRAFT_1306 0.30 +0.3
1,353,463 - B158DRAFT_1306 0.33 +0.0
1,353,565 - B158DRAFT_1306 0.38 -0.0
1,353,567 + B158DRAFT_1306 0.38 +1.1
1,353,624 + B158DRAFT_1306 0.41 -0.0
1,353,624 + B158DRAFT_1306 0.41 -0.4
1,353,624 + B158DRAFT_1306 0.41 +0.1
1,353,624 + B158DRAFT_1306 0.41 +0.1
1,353,627 - B158DRAFT_1306 0.41 +0.7
1,353,816 + B158DRAFT_1306 0.51 -0.1
1,353,816 + B158DRAFT_1306 0.51 -0.7
1,353,830 - B158DRAFT_1306 0.52 +0.0
1,353,844 + B158DRAFT_1306 0.53 +0.5
1,353,864 - B158DRAFT_1306 0.54 -0.5
1,353,865 + B158DRAFT_1306 0.54 -0.1
1,353,873 - B158DRAFT_1306 0.54 -0.2
1,353,873 - B158DRAFT_1306 0.54 +0.3
1,353,873 - B158DRAFT_1306 0.54 -0.3
1,353,898 - B158DRAFT_1306 0.56 -0.0
1,353,900 + B158DRAFT_1306 0.56 +0.2
1,353,900 + B158DRAFT_1306 0.56 +0.4
1,353,900 + B158DRAFT_1306 0.56 +0.0
1,353,908 - B158DRAFT_1306 0.56 +0.3
1,353,959 + B158DRAFT_1306 0.59 -0.9
1,354,023 + B158DRAFT_1306 0.62 +0.9
1,354,023 + B158DRAFT_1306 0.62 +1.7
1,354,023 + B158DRAFT_1306 0.62 -2.4
1,354,206 + B158DRAFT_1306 0.72 -0.5
1,354,254 + B158DRAFT_1306 0.74 +0.3
1,354,254 + B158DRAFT_1306 0.74 +0.1
1,354,254 + B158DRAFT_1306 0.74 -0.2
1,354,254 + B158DRAFT_1306 0.74 -0.2
1,354,262 - B158DRAFT_1306 0.75 +0.1
1,354,284 + B158DRAFT_1306 0.76 -0.2
1,354,292 + B158DRAFT_1306 0.76 +1.7
1,354,292 + B158DRAFT_1306 0.76 -0.7
1,354,300 - B158DRAFT_1306 0.77 +1.2
1,354,300 - B158DRAFT_1306 0.77 -0.4
1,354,326 - B158DRAFT_1306 0.78 +0.0
1,354,344 + B158DRAFT_1306 0.79 -0.2
1,354,370 - B158DRAFT_1306 0.81 +0.4
1,354,407 + B158DRAFT_1306 0.83 -0.1
1,354,415 - B158DRAFT_1306 0.83 -0.4
1,354,415 - B158DRAFT_1306 0.83 -0.1
1,354,415 - B158DRAFT_1306 0.83 -0.3
1,354,415 - B158DRAFT_1306 0.83 +0.0
1,354,415 - B158DRAFT_1306 0.83 +0.1
1,354,415 - B158DRAFT_1306 0.83 -0.6
1,354,431 - B158DRAFT_1306 0.84 -0.0
1,354,451 + B158DRAFT_1306 0.85 -0.3
1,354,464 + B158DRAFT_1306 0.86 -0.5
1,354,472 - B158DRAFT_1306 0.86 +0.4
1,354,640 - +0.6
1,354,645 + +0.1
1,354,653 - +0.2
1,354,657 + -0.1
1,354,672 - -0.1
1,354,744 + +0.3
1,355,325 - -2.0

Or see this region's nucleotide sequence